Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Gm25239-201ENSMUST00000174915 86 ntBASIC36.95■■■■□ 3.51
Hmbox1Q8BJA3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
Hmbox1Q8BJA3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Hmbox1Q8BJA3 Gm24109-201ENSMUST00000175489 103 ntBASIC32.44■■■□□ 2.78
Hmbox1Q8BJA3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Hmbox1Q8BJA3 Gm15042-201ENSMUST00000120212 883 ntBASIC31.6■■■□□ 2.65
Hmbox1Q8BJA3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Hmbox1Q8BJA3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Hmbox1Q8BJA3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Hmbox1Q8BJA3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Hmbox1Q8BJA3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Hmbox1Q8BJA3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Hmbox1Q8BJA3 Gm23366-201ENSMUST00000175022 89 ntBASIC30.79■■■□□ 2.52
Hmbox1Q8BJA3 Gm15045-201ENSMUST00000117359 883 ntBASIC30.72■■■□□ 2.51
Hmbox1Q8BJA3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.48■■■□□ 2.47
Hmbox1Q8BJA3 Psd-208ENSMUST00000224556 2034 ntBASIC30.37■■■□□ 2.45
Hmbox1Q8BJA3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
Hmbox1Q8BJA3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Hmbox1Q8BJA3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Hmbox1Q8BJA3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.05■■■□□ 2.4
Hmbox1Q8BJA3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Hmbox1Q8BJA3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Hmbox1Q8BJA3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Hmbox1Q8BJA3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Hmbox1Q8BJA3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.52■■■□□ 2.32
Hmbox1Q8BJA3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Hmbox1Q8BJA3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Hmbox1Q8BJA3 Gm25238-201ENSMUST00000174914 89 ntBASIC29.38■■■□□ 2.29
Hmbox1Q8BJA3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Hmbox1Q8BJA3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Hmbox1Q8BJA3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Hmbox1Q8BJA3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Hmbox1Q8BJA3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Hmbox1Q8BJA3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Hmbox1Q8BJA3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.91■■■□□ 2.22
Hmbox1Q8BJA3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Hmbox1Q8BJA3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
Hmbox1Q8BJA3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
Hmbox1Q8BJA3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.58■■■□□ 2.17
Hmbox1Q8BJA3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Hmbox1Q8BJA3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Hmbox1Q8BJA3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Hmbox1Q8BJA3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
Hmbox1Q8BJA3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.35■■■□□ 2.13
Hmbox1Q8BJA3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Hmbox1Q8BJA3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Hmbox1Q8BJA3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Hmbox1Q8BJA3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.21■■■□□ 2.11
Hmbox1Q8BJA3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Hmbox1Q8BJA3 Gm26115-201ENSMUST00000175605 87 ntBASIC28.16■■■□□ 2.1
Hmbox1Q8BJA3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.15■■■□□ 2.1
Hmbox1Q8BJA3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.15■■■□□ 2.1
Hmbox1Q8BJA3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Hmbox1Q8BJA3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.03■■■□□ 2.08
Hmbox1Q8BJA3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Hmbox1Q8BJA3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Hmbox1Q8BJA3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Hmbox1Q8BJA3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.99■■■□□ 2.07
Hmbox1Q8BJA3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Hmbox1Q8BJA3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Hmbox1Q8BJA3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Hmbox1Q8BJA3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Hmbox1Q8BJA3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Hmbox1Q8BJA3 Gm8109-201ENSMUST00000194076 746 ntBASIC27.88■■■□□ 2.05
Hmbox1Q8BJA3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.86■■■□□ 2.05
Hmbox1Q8BJA3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Hmbox1Q8BJA3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Hmbox1Q8BJA3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Hmbox1Q8BJA3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Hmbox1Q8BJA3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.73■■■□□ 2.03
Hmbox1Q8BJA3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.58■■■□□ 2.01
Hmbox1Q8BJA3 Gm27325-201ENSMUST00000175467 74 ntBASIC27.55■■■□□ 2
Hmbox1Q8BJA3 Rab21-202ENSMUST00000218831 843 ntBASIC27.54■■■□□ 2
Hmbox1Q8BJA3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Hmbox1Q8BJA3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.44■■□□□ 1.98
Hmbox1Q8BJA3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Hmbox1Q8BJA3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Hmbox1Q8BJA3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.34■■□□□ 1.97
Hmbox1Q8BJA3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Hmbox1Q8BJA3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Hmbox1Q8BJA3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.27■■□□□ 1.96
Hmbox1Q8BJA3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.26■■□□□ 1.95
Hmbox1Q8BJA3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Hmbox1Q8BJA3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.18■■□□□ 1.94
Hmbox1Q8BJA3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.11■■□□□ 1.93
Hmbox1Q8BJA3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hmbox1Q8BJA3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hmbox1Q8BJA3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Hmbox1Q8BJA3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hmbox1Q8BJA3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27■■□□□ 1.91
Hmbox1Q8BJA3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hmbox1Q8BJA3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Hmbox1Q8BJA3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Hmbox1Q8BJA3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hmbox1Q8BJA3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Hmbox1Q8BJA3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Hmbox1Q8BJA3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Hmbox1Q8BJA3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Hmbox1Q8BJA3 Gm24804-201ENSMUST00000174982 85 ntBASIC26.86■■□□□ 1.89
Hmbox1Q8BJA3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms