Protein–RNA interactions for Protein: Q5ND52

Mrm3, rRNA methyltransferase 3, mitochondrial, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrm3Q5ND52 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Mrm3Q5ND52 Gm25239-201ENSMUST00000174915 86 ntBASIC31.78■■■□□ 2.68
Mrm3Q5ND52 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
Mrm3Q5ND52 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Mrm3Q5ND52 Psd-208ENSMUST00000224556 2034 ntBASIC30.47■■■□□ 2.47
Mrm3Q5ND52 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Mrm3Q5ND52 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Mrm3Q5ND52 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Mrm3Q5ND52 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Mrm3Q5ND52 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Mrm3Q5ND52 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Mrm3Q5ND52 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Mrm3Q5ND52 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Mrm3Q5ND52 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Mrm3Q5ND52 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Mrm3Q5ND52 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Mrm3Q5ND52 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Mrm3Q5ND52 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Mrm3Q5ND52 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.52■■■□□ 2.16
Mrm3Q5ND52 Gm15042-201ENSMUST00000120212 883 ntBASIC28.37■■■□□ 2.13
Mrm3Q5ND52 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Mrm3Q5ND52 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Mrm3Q5ND52 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Mrm3Q5ND52 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Mrm3Q5ND52 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Mrm3Q5ND52 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Mrm3Q5ND52 Gm15045-201ENSMUST00000117359 883 ntBASIC27.87■■■□□ 2.05
Mrm3Q5ND52 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.71■■■□□ 2.03
Mrm3Q5ND52 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Mrm3Q5ND52 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Mrm3Q5ND52 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Mrm3Q5ND52 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.56■■■□□ 2
Mrm3Q5ND52 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Mrm3Q5ND52 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Mrm3Q5ND52 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Mrm3Q5ND52 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.52■■■□□ 2
Mrm3Q5ND52 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.5■■□□□ 1.99
Mrm3Q5ND52 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mrm3Q5ND52 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.37■■□□□ 1.97
Mrm3Q5ND52 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Mrm3Q5ND52 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.33■■□□□ 1.97
Mrm3Q5ND52 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Mrm3Q5ND52 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Mrm3Q5ND52 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Mrm3Q5ND52 Gm24109-201ENSMUST00000175489 103 ntBASIC27.25■■□□□ 1.95
Mrm3Q5ND52 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Mrm3Q5ND52 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Mrm3Q5ND52 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Mrm3Q5ND52 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.02■■□□□ 1.92
Mrm3Q5ND52 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27■■□□□ 1.91
Mrm3Q5ND52 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Mrm3Q5ND52 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Mrm3Q5ND52 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Mrm3Q5ND52 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Mrm3Q5ND52 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Mrm3Q5ND52 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Mrm3Q5ND52 Gm23366-201ENSMUST00000175022 89 ntBASIC26.66■■□□□ 1.86
Mrm3Q5ND52 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Mrm3Q5ND52 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.86
Mrm3Q5ND52 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Mrm3Q5ND52 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Mrm3Q5ND52 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Mrm3Q5ND52 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Mrm3Q5ND52 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Mrm3Q5ND52 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Mrm3Q5ND52 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.49■■□□□ 1.83
Mrm3Q5ND52 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Mrm3Q5ND52 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Mrm3Q5ND52 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Mrm3Q5ND52 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Mrm3Q5ND52 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Mrm3Q5ND52 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Mrm3Q5ND52 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Mrm3Q5ND52 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Mrm3Q5ND52 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Mrm3Q5ND52 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Mrm3Q5ND52 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Mrm3Q5ND52 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Mrm3Q5ND52 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Mrm3Q5ND52 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Mrm3Q5ND52 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Mrm3Q5ND52 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Mrm3Q5ND52 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.03■■□□□ 1.76
Mrm3Q5ND52 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Mrm3Q5ND52 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Mrm3Q5ND52 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Mrm3Q5ND52 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.9■■□□□ 1.74
Mrm3Q5ND52 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Mrm3Q5ND52 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Mrm3Q5ND52 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Mrm3Q5ND52 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Mrm3Q5ND52 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
Mrm3Q5ND52 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Mrm3Q5ND52 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Mrm3Q5ND52 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Mrm3Q5ND52 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Mrm3Q5ND52 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Mrm3Q5ND52 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
Mrm3Q5ND52 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Mrm3Q5ND52 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.66■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms