RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 VEZF1Q14119 521 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 RGNQ15493 299 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 TAF11Q15544 211 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 MPEG1Q2M385 716 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 VMACQ2NL98 169 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 OGFRL1Q5TC84 451 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 NIPAL1Q6NVV3 410 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 IRGCQ6NXR0 463 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 RNF111Q6ZNA4 994 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 FKBP9P1Q75LS8 142 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 ERMP1Q7Z2K6 904 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 SLC30A8Q8IWU4 369 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 SAMD14Q8IZD0 417 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 CSNK1A1LQ8N752 337 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 KCT2Q8NC54 265 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 EXOSC8Q96B26 276 aaKnown RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 TRAPPC9Q96Q05 1148 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 BBS4Q96RK4 519 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 ZNF184Q99676 751 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 PKP2Q99959 881 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 CHRNA10Q9GZZ6 450 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 SLC35C2Q9NQQ7 365 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 OLAHQ9NV23 265 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 EVA1BQ9NVM1 165 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 UCKL1Q9NWZ5 548 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 TEX10Q9NXF1 929 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 PILRBQ9UKJ0 227 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 UTS2RQ9UKP6 389 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 USP22Q9UPT9 525 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 ENTPD4Q9Y227 616 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 SNX11Q9Y5W9 270 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 ABCA7Q8IZY2 2146 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 THADAQ6YHU6 1953 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 A0A1W2PR48 441 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 TLCD2A6NGC4 264 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 PROM1O43490 865 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 KCNK5O95279 499 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 EIF2S1P05198 315 aaKnown RBP13.06□□□□□ -0.32
TPM1-215ENST00000558868 RAP2AP10114 183 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 NR2F6P10588 404 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 ALPPL2P10696 532 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 ST6GAL1P15907 406 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 ALOX12P18054 663 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 HOXD12P35452 270 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 SOX11P35716 441 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 GPR3P46089 330 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 GAB1Q13480 694 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 GRAMD1BQ3KR37 738 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 PLK5Q496M5 336 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 SLC48A1Q6P1K1 146 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 CEP68Q76N32 757 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 ZZZ3Q8IYH5 903 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 MMP21Q8N119 569 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 AMER3Q8N944 861 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 C11orf65Q8NCR3 313 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 OR6C4Q8NGE1 309 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 MOAP1Q96BY2 351 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 AHCYL2Q96HN2 611 aaKnown RBP13.06□□□□□ -0.32
TPM1-215ENST00000558868 FCRL4Q96PJ5 515 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 DUSP23Q9BVJ7 150 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 KLHL25Q9H0H3 589 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 MAGIXQ9H6Y5 334 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 LYRM4Q9HD34 91 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 SEMA3GQ9NS98 782 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 DCAF13Q9NV06 445 aaKnown RBP13.06□□□□□ -0.32
TPM1-215ENST00000558868 LRIT1Q9P2V4 623 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 RPS6KA6Q9UK32 745 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 FBXW2Q9UKT8 454 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 SAMD4AQ9UPU9 718 aaKnown RBP13.06□□□□□ -0.32
TPM1-215ENST00000558868 DTNAQ9Y4J8 743 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 ATG4BQ9Y4P1 393 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 SLC22A7Q9Y694 548 aa13.06□□□□□ -0.32
TPM1-215ENST00000558868 SNRNP200O75643 2136 aaKnown RBP13.06□□□□□ -0.32
TPM1-215ENST00000558868 MDC1Q14676 2089 aaKnown RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 LOC105369274A0A096LPK9 316 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 LOC102723532A0A0G2JNH3 316 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 SLC9B1P1A6NJY1 282 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 PRR33A8MZF0 331 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 C4orf51C9J302 202 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 P2RX6O15547 441 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 AIFM1O95831 613 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 NTRK1P04629 796 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 CAPNS1P04632 268 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 BMP2P12643 396 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ACADSP16219 412 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 GLB1P16278 677 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 CSNK2A2P19784 350 aaPredicted RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 CPN2P22792 545 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 PCGF2P35227 344 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 CRATP43155 626 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 PRIM2P49643 509 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 VSX2P58304 361 aaPredicted RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 GPLD1P80108 840 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 SPIDRQ14159 915 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 NDUFA9Q16795 377 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 PRSS53Q2L4Q9 553 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 SPDYE7PQ495Y7 208 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 GCNT6Q5T4J0 391 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms