RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ATP5A1P25705 553 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 RFC3P40938 356 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 PAFAH1B1P43034 410 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 RAB10P61026 200 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 GUCY2DQ02846 1103 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SLC13A2Q13183 592 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TRADDQ15628 312 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CLNKQ7Z7G1 428 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 OR52N2Q8NGI0 321 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ANKRD9Q96BM1 317 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 MAPKAP1Q9BPZ7 522 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CD244Q9BZW8 370 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 DPH5Q9H2P9 285 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ZDHHC11Q9H8X9 412 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 LIN28AQ9H9Z2 209 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 IGSF5Q9NSI5 407 aa13.38□□□□□ -0.27
TNFRSF1A-203ENST00000437813 MTORP42345 2549 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 A0A088AWK7 358 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 HMX2A2RU54 273 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SYNDIG1LA6NDD5 238 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CLGNO14967 610 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 FAM155BO75949 473 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ZFAND5O76080 213 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 GLSO94925 669 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 OR6B1O95007 311 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SNRPB2P08579 225 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 COX6B1P14854 86 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ZNF10P21506 573 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 HPDP32754 393 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SOX3P41225 446 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SSR4P51571 173 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 HK2P52789 917 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SLC12A2P55011 1212 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 GPR85P60893 370 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CHIT1Q13231 466 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 EFTUD2Q15029 972 aaKnown RBP eCLIP13.37□□□□□ -0.272e-8■■■■■ 60
TNFRSF1A-203ENST00000437813 KBTBD12Q3ZCT8 623 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ZDHHC24Q6UX98 284 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 C3orf62Q6ZUJ4 267 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 LRRC70Q7Z2Q7 622 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 GPALPP1Q8IXQ4 340 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CENPLQ8N0S6 344 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TMEM132CQ8N3T6 1108 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TMEM156Q8N614 296 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ACOT4Q8N9L9 421 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 MORN4Q8NDC4 146 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 OR8K3Q8NH51 312 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CCT6BQ92526 530 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 RASL10BQ96S79 203 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SPOCK3Q9BQ16 436 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TBCDQ9BTW9 1192 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ZNF717Q9BY31 904 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 RUBCNLQ9H714 662 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 FBXW2Q9UKT8 454 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 MRPS33Q9Y291 106 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TSC22D4Q9Y3Q8 395 aa13.37□□□□□ -0.27
TNFRSF1A-203ENST00000437813 MYOCOSA0A1B0GUC4 107 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 RTCAO00442 366 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 PRRG2O14669 202 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TFECO14948 347 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ETHE1O95571 254 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TUBB4AP04350 444 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 IGKV3-11P04433 115 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 HIST1H1TP22492 207 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 PTGS2P35354 604 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 KRTAP10-9P60411 292 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TFF3Q07654 80 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 FOXO1Q12778 655 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 LAPTM5Q13571 262 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TMEM35AQ53FP2 167 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CMC1Q7Z7K0 106 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 RPRMLQ8N4K4 120 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 OR2M7Q8NG81 312 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 OR7G3Q8NG95 312 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 OR14A16Q8NHC5 309 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 FBXO25Q8TCJ0 367 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ZNF721Q8TF20 911 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CDKL2Q92772 493 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 C14orf79Q96F83 325 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 ALG9Q9H6U8 611 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SH2D2AQ9NP31 389 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 TIMMDC1Q9NPL8 285 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CD274Q9NZQ7 290 aa13.36□□□□□ -0.27
TNFRSF1A-203ENST00000437813 NCKAP5O14513 1909 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CCNT2O60583 730 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 KERAO60938 352 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 LDB3O75112 727 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 IGHG3P01860 377 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 SPRP35270 261 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 MSH2P43246 934 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 RNF4P78317 190 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 IRF8Q02556 426 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 NAA30Q147X3 362 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 HYAL4Q2M3T9 481 aa13.35□□□□□ -0.27
TNFRSF1A-203ENST00000437813 PAGE2BQ5JRK9 111 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms