RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TEKQ02763 1124 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 EEF1A2Q05639 463 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SEC23BQ15437 767 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 UAP1L1Q3KQV9 507 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 ANXA8L1Q5VT79 327 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 LIPKQ5VXJ0 399 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CST9Q5W186 159 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 ABI3BPQ7Z7G0 1075 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 DBF4BQ8NFT6 615 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 WDR48Q8TAF3 677 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 OVCA2Q8WZ82 227 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 RNF170Q96K19 258 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 GDF15Q99988 308 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 C3orf14Q9HBI5 128 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC25A19Q9HC21 320 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CNOT2Q9NZN8 540 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 B4GALT6Q9UBX8 382 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 GRIP1Q9Y3R0 1128 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PCDHGB2Q9Y5G2 931 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 H0YIV9 168 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 SEMA7AO75326 666 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC16A8O95907 504 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 ASMTP46597 345 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 AP1S2P56377 157 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 NKX3-2P78367 333 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 SP140Q13342 867 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 PUM1Q14671 1186 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 TOR1AIP1Q5JTV8 583 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 ZNF770Q6IQ21 691 aaPredicted RBP11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC8B1Q6J4K2 584 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 VN1R5Q7Z5H4 357 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 CAMKMTQ7Z624 323 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 TMPRSS11BQ86T26 416 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 GLCCI1Q86VQ1 547 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 OR52N2Q8NGI0 321 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 GEMIN6Q8WXD5 167 aaKnown RBP11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 NEIL2Q969S2 332 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 TMEM203Q969S6 136 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 LYSMD1Q96S90 227 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 ABCB9Q9NP78 766 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 YARS2Q9Y2Z4 477 aaKnown RBP11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 YIPF1Q9Y548 306 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 SNX11Q9Y5W9 270 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 MAU2Q9Y6X3 613 aa11.21□□□□□ -0.61
PDZRN3-203ENST00000462146 TLR4O00206 839 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 CDRT1O95170 752 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 CHI3L1P36222 383 aaPredicted RBP11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 CSNK1DP48730 415 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 SPINT3P49223 89 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 FKBP1BP68106 108 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 CD83Q01151 205 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 PLEKHS1Q5SXH7 462 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 TMIGD1Q6UXZ0 262 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 ARMCX6Q7L4S7 300 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 TRIM48Q8IWZ4 208 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 TAGAPQ8N103 731 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 WFDC6Q9BQY6 131 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 WRAP53Q9BUR4 548 aaKnown RBP11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 C11orf54Q9H0W9 315 aaPredicted RBP11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 MIXL1Q9H2W2 232 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF334Q9HCZ1 680 aaPredicted RBP11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 KLHL42Q9P2K6 505 aa11.21□□□□□ -0.62
PDZRN3-203ENST00000462146 SCN5AQ14524 2016 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 SH3D21A4FU49 640 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 EIF3FO00303 357 aaPredicted RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 TGFB1P01137 390 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 IMPA1P29218 277 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 RORCP51449 518 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF157P51786 506 aaPredicted RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 GALK2Q01415 458 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 SPHARQ15513 63 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 FAM131AQ6UXB0 335 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 USP45Q70EL2 814 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF438Q7Z4V0 828 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 GPR65Q8IYL9 337 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 IQCF1Q8N6M8 205 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 FAM46DQ8NEK8 389 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 SETD6Q8TBK2 473 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 CLP1Q92989 425 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 MAPKAP1Q9BPZ7 522 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 SORBS1Q9BX66 1292 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 OR51B5Q9H339 312 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 ENPP4Q9Y6X5 453 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 MTCL1Q9Y4B5 1905 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 NOTOA8MTQ0 251 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 RFXAPO00287 272 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 UGDHO60701 494 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 KLHL18O94889 574 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 GSTM1P09488 218 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 CSF3P09919 207 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 ITGA2P17301 1181 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 PTX3P26022 381 aaPredicted RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 ACLYP53396 1101 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 PRKCZQ05513 592 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms