RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SH3D21A4FU49 640 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 ZNF3P17036 446 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 IRF5Q13568 498 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 GPR68Q15743 365 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 CTSL3PQ5NE16 218 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 KHDRBS2Q5VWX1 349 aaKnown RBP16.73■□□□□ 0.27
PTPRU-202ENST00000373779 OTOP2Q7RTS6 562 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 SERPINA11Q86U17 422 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 DENND6BQ8NEG7 585 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 TBC1D15Q8TC07 691 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 TNFAIP8L1Q8WVP5 186 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 GLYATL1Q969I3 302 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 S100A13Q99584 98 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 NDC1Q9BTX1 674 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 CKLFQ9UBR5 152 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 FAM25EA8MYX2 175 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 LATS1O95835 1130 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 GSTT2BP0CG30 244 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 SDC1P18827 310 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 TBPL1P62380 186 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 LASP1Q14847 261 aaKnown RBP16.73■□□□□ 0.27
PTPRU-202ENST00000373779 POF1BQ8WVV4 589 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 GTF2H4Q92759 462 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 CHIAQ9BZP6 476 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 WDR26Q9H7D7 661 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 IL26Q9NPH9 171 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 MARK1Q9P0L2 795 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 AASSQ9UDR5 926 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 MMP20O60882 483 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 CD9P21926 228 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 PPP3R1P63098 170 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 RGNQ15493 299 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 SLC14A2Q15849 920 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 HSDL2Q6YN16 418 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 EPYCQ99645 322 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 CLMPQ9H6B4 373 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 HEBP2Q9Y5Z4 205 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 SCN2BO60939 215 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 STATHP02808 62 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 TRAM2Q15035 370 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 CPZQ66K79 652 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 B3GNT8Q7Z7M8 397 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 PEG10Q86TG7 708 aaKnown RBP16.72■□□□□ 0.27
PTPRU-202ENST00000373779 ZNF248Q8NDW4 579 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 OSTF1Q92882 214 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 IGSF21Q96ID5 467 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 NTMT1Q9BV86 223 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 SRMSQ9H3Y6 488 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 PCDHGB7Q9Y5F8 929 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 PCDHGB6Q9Y5F9 930 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 FKBP7Q9Y680 259 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 MCIDASD6RGH6 385 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 E2F3O00716 465 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 JRKO75564 520 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 LEFTY1O75610 366 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 GET4Q7L5D6 327 aaPredicted RBP16.72■□□□□ 0.27
PTPRU-202ENST00000373779 GHDCQ8N2G8 530 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 OR52N2Q8NGI0 321 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 PIGKQ92643 395 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 ACPTQ9BZG2 426 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 RDH14Q9HBH5 336 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 NDUFB5O43674 189 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 SEMA3DO95025 777 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 ITPKBP27987 946 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 NKX2-5P52952 324 aaPredicted RBP16.72■□□□□ 0.27
PTPRU-202ENST00000373779 SLC3A1Q07837 685 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 CDKL4Q5MAI5 379 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 BBS10Q8TAM1 723 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 MUL1Q969V5 352 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 CNDP2Q96KP4 475 aaKnown RBP16.72■□□□□ 0.27
PTPRU-202ENST00000373779 GPR78Q96P69 363 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 TCF7L1Q9HCS4 588 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 UCKL1Q9NWZ5 548 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 ABCD2Q9UBJ2 740 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 HSPB11Q9Y547 144 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 OXSR1O95747 527 aaPredicted RBP16.72■□□□□ 0.27
PTPRU-202ENST00000373779 TNFRSF1BP20333 461 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 VEZF1Q14119 521 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 C22orf42Q6IC83 251 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 OR13F1Q8NGS4 319 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 A0A1W2PQ45 241 aaPredicted RBP16.72■□□□□ 0.27
PTPRU-202ENST00000373779 A0A1W2PQY0 241 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 RCBTB2O95199 551 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 STOMP27105 288 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 CXCR4P61073 352 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 GTF2IRD2BQ6EKJ0 949 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 VITQ6UXI7 678 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 GTF2IRD2Q86UP8 949 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 TDP1Q9NUW8 608 aa16.72■□□□□ 0.27
PTPRU-202ENST00000373779 XKRYO14609 159 aa16.71■□□□□ 0.27
PTPRU-202ENST00000373779 OR12D1P0DN82 309 aa16.71■□□□□ 0.27
PTPRU-202ENST00000373779 ADH5P11766 374 aa16.71■□□□□ 0.27
PTPRU-202ENST00000373779 MICAQ29983 383 aa16.71■□□□□ 0.27
PTPRU-202ENST00000373779 SLC27A4Q6P1M0 643 aa16.71■□□□□ 0.27
PTPRU-202ENST00000373779 CRTC1Q6UUV9 634 aa16.71■□□□□ 0.27
PTPRU-202ENST00000373779 MMAAQ8IVH4 418 aaKnown RBP16.71■□□□□ 0.27
PTPRU-202ENST00000373779 MFSD6LQ8IWD5 586 aa16.71■□□□□ 0.27
PTPRU-202ENST00000373779 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.71■□□□□ 0.27
PTPRU-202ENST00000373779 PJA1Q8NG27 643 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms