RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 C6orf120Q7Z4R8 191 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 BMP8AQ7Z5Y6 402 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 DPYSL5Q9BPU6 564 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 ACTL8Q9H568 366 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 C2orf74A8MZ97 194 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 RHCEP18577 417 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 TPRG1LQ5T0D9 272 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 GNPDA2Q8TDQ7 276 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 C16orf78Q8WTQ4 265 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 OSTF1Q92882 214 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-201ENST00000264555 SLC2A4RGQ9NR83 387 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 LIPT1Q9Y234 373 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 MED31Q9Y3C7 131 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 BTN3A3O00478 584 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF821O75541 412 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-201ENST00000264555 CDH11P55287 796 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 NPRL3Q12980 569 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 E2F2Q14209 437 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 PEG10Q86TG7 708 aaKnown RBP16.05■□□□□ 0.16
PHRF1-201ENST00000264555 TCEANCQ8N8B7 351 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 OR52N2Q8NGI0 321 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 TBX5Q99593 518 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 DPH7Q9BTV6 452 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 COMMD4Q9H0A8 199 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 MTG2Q9H4K7 406 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 PAK6Q9NQU5 681 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-201ENST00000264555 HRASLS2Q9NWW9 162 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 GIN1Q9NXP7 522 aa16.05■□□□□ 0.16
PHRF1-201ENST00000264555 REM1O75628 298 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 ZFP69Q49AA0 526 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 TUBA3EQ6PEY2 450 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 GKN2Q86XP6 184 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.04■□□□□ 0.165e-7■■■■□ 25.5
PHRF1-201ENST00000264555 OR7G3Q8NG95 312 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 OR6K6Q8NGW6 343 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 EMC8O43402 210 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 PSIP1O75475 530 aaKnown RBP16.04■□□□□ 0.16
PHRF1-201ENST00000264555 FHP07954 510 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 CCR7P32248 378 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 CPOXP36551 454 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 GBX2P52951 348 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-201ENST00000264555 GABARAPL2P60520 117 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 SLC36A4Q6YBV0 504 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 MAGEB3O15480 346 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF404Q494X3 552 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 GTDC1Q4AE62 458 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 OR4C11Q6IEV9 310 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 NETO1Q8TDF5 533 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 MCHR1Q99705 422 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 DNAJC27Q9NZQ0 273 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 LOXHD1Q8IVV2 1947 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 FEZF1A0PJY2 475 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 RENP00797 406 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 ITGB7P26010 798 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 IDNKQ5T6J7 187 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 ZCCHC12Q6PEW1 402 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 XKR5Q6UX68 686 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 PAMR1Q6UXH9 720 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 KLHDC7BQ96G42 594 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 INPP5KQ9BT40 448 aa16.04■□□□□ 0.16
PHRF1-201ENST00000264555 TCRBV3S1A0A5B6 114 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 WBP4O75554 376 aaKnown RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 MAGEA12P43365 314 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 TLDC1Q6P9B6 456 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 ATP6V1C2Q8NEY4 427 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 PELI2Q9HAT8 420 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 HMX2A2RU54 273 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 PDCD5O14737 125 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 MID1O15344 667 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 GPR39O43194 453 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 CD72P21854 359 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 RAB28P51157 221 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 AP3S2P59780 193 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 RHAGQ02094 409 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 ST3GAL4Q11206 333 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 AMIGO1Q86WK6 493 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 TBL1XR1Q9BZK7 514 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 OR51I1Q9H343 314 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 C14orf105Q9NVL8 296 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 COMMD9Q9P000 198 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 H0YC42 278 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 CH25HO95992 272 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 ETFAP13804 333 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 MADCAM1Q13477 382 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 PGM2L1Q6PCE3 622 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 MRPL43Q8N983 215 aaKnown RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 TMEM203Q969S6 136 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 ELL3Q9HB65 397 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 TMEM5Q9Y2B1 443 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 MYO18AQ92614 2054 aaKnown RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 RTCAO00442 366 aaKnown RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 GABBR2O75899 941 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF182P17025 639 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 RNASE12Q5GAN4 147 aaKnown RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 OTUD1Q5VV17 481 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 NIPAL1Q6NVV3 410 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 NUP43Q8NFH3 380 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms