RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 THOC3Q96J01 351 aaKnown RBP3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 MAGED4Q96JG8 741 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 DNAJC1Q96KC8 554 aaKnown RBP3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 RMDN2Q96LZ7 410 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 NSMCE3Q96MG7 304 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 TRAPPC9Q96Q05 1148 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 DMRTA2Q96SC8 542 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 BAG1Q99933 345 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 FAM118BQ9BPY3 351 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 TRIM54Q9BYV2 358 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 SPRY4Q9C004 299 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 LHPPQ9H008 270 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 WDR54Q9H977 334 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 ZNF304Q9HCX3 659 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 HOMER3Q9NSC5 361 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 CUTCQ9NTM9 273 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 NLE1Q9NVX2 485 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 EURLQ9NYK6 297 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 PAK5Q9P286 719 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 DHCR7Q9UBM7 475 aaKnown RBP3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 TRPC4Q9UBN4 977 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 FBXL4Q9UKA2 621 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 OSGIN2Q9Y236 505 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 MAD1L1Q9Y6D9 718 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 LRP4O75096 1905 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 LRRK1Q38SD2 2015 aa3.59□□□□□ -1.83
HMGN1P11-201ENST00000508668 MAST4O15021 2626 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZFC3H1O60293 1989 aaKnown RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 SDK2Q58EX2 2172 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 RP1L1Q8IWN7 2480 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 TLN1Q9Y490 2541 aaKnown RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 TRAV17A0A0B4J275 112 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 A0A0J9YVX5 310 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 GOLGA6L10A0A0M3HER8 536 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 ARHGAP10A1A4S6 786 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 CDHR4A6H8M9 788 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 A8MUI8 341 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 TARM1B6A8C7 271 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRSS44E7EML9 344 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 FAM227AF5H4B4 570 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PSMD12O00232 456 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 BTN3A3O00478 584 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 CCL22O00626 93 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRMT5O14744 637 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 DSCR3O14972 297 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 CD3EAPO15446 510 aaKnown RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 TTI1O43156 1089 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 LRRTM2O43300 516 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZBTB14O43829 449 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 SUN1O94901 812 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 RASAL1O95294 804 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 GOT2P00505 430 aaKnown RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 COX6B1P14854 86 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 MAGP20916 626 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 MALP21145 153 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 MMP11P24347 488 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 UQCRFS1P47985 274 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 NPY2RP49146 381 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 RGS4P49798 205 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 MAP2K6P52564 334 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 EMP2P54851 167 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 HADHBP55084 474 aaKnown RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 VSX2P58304 361 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 OC90Q02509 493 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 SRSF1Q07955 248 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 SNX1Q13596 522 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PTPRCAPQ14761 206 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 RPS6KA1Q15418 735 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 MINDY4Q4G0A6 757 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 CCDC38Q502W7 563 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 CRB2Q5IJ48 1285 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PCID2Q5JVF3 399 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 LRRC8EQ6NSJ5 796 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 NIPAL1Q6NVV3 410 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 DRICH1Q6PGQ1 229 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 GFRALQ6UXV0 394 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PACS1Q6VY07 963 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 SHISA6Q6ZSJ9 500 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 TRIM73Q86UV7 250 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 MPP5Q8N3R9 675 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 C2orf73Q8N5S3 287 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 RNF10Q8N5U6 811 aaKnown RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZBTB2Q8N680 514 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 METTL27Q8N6F8 245 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 ST6GALNAC3Q8NDV1 305 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR52K1Q8NGK4 314 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PPP4R1Q8TF05 950 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PEX13Q92968 403 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 TMEM125Q96AQ2 219 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 EID2BQ96D98 161 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 SNRNP40Q96DI7 357 aaKnown RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 MMABQ96EY8 250 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 CDKN2AIPNLQ96HQ2 116 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 NAP1L3Q99457 506 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 TMEM121Q9BTD3 319 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 NUDT9Q9BW91 350 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 CARD6Q9BX69 1037 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 PITPNM3Q9BZ71 974 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 IL22Q9GZX6 179 aa3.58□□□□□ -1.84
HMGN1P11-201ENST00000508668 SPRTNQ9H040 489 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms