RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TSPAN33Q86UF1 283 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 C17orf64Q86WR6 236 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 Q8N402 240 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CCDC115Q96NT0 180 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CPPED1Q9BRF8 314 aaPredicted RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 CCDC32Q9BV29 185 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CHIAQ9BZP6 476 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 ZCCHC3Q9NUD5 404 aaKnown RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 TMEM45AQ9NWC5 275 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 TAS2R7Q9NYW3 318 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DUX4Q9UBX2 424 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 FOCADQ5VW36 1801 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 TRAV6A0A075B6T7 132 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 SEPT4O43236 478 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 FGBP02675 491 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 PTNP21246 168 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 ACRV1P26436 265 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 SELENBP1Q13228 472 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 SLC14A2Q15849 920 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 TXNDC8Q6A555 127 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 RGMBQ6NW40 437 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 DPY19L3Q6ZPD9 716 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 USP51Q70EK9 711 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 RIMKLAQ8IXN7 391 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 SLC43A3Q8NBI5 491 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 JPH3Q8WXH2 748 aaPredicted RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 USP7Q93009 1102 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 SUV39H2Q9H5I1 410 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 IL26Q9NPH9 171 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 ASPDHA6ND91 283 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 CPSF4LA6NMK7 179 aaKnown RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 INMT-MINDY4F8WBC2 141 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 COCHO43405 550 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 ATP1B2P14415 290 aaPredicted RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 MTAPQ13126 283 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 TBCEQ15813 527 aaPredicted RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 NKG7Q16617 165 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 SPIN4Q56A73 249 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 ATAD3CQ5T2N8 411 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 IER5LQ5T953 404 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 NLGN4XQ8N0W4 816 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 DENND6BQ8NEG7 585 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 TRPV1Q8NER1 839 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 DBF4BQ8NFT6 615 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 OR2AP1Q8NGE2 309 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 DYNC2LI1Q8TCX1 351 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 PIGKQ92643 395 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 PIP5K1AQ99755 562 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 GPR62Q9BZJ7 368 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 AKIP1Q9NQ31 210 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 EIF3KQ9UBQ5 218 aaKnown RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 CHST10O43529 356 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 MMP2P08253 660 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 ELNP15502 786 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 BPIP17213 487 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 CENPAP49450 140 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 GPR17Q13304 367 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 GINS1Q14691 196 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 ZNF630Q2M218 657 aaPredicted RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 TPRG1Q6ZUI0 275 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 METTL3Q86U44 580 aaKnown RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 LHFPL3Q86UP9 236 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 PHYKPLQ8IUZ5 450 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 TIFAQ96CG3 184 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 DOK1Q99704 481 aa10.13□□□□□ -0.79
USB1-212ENST00000566082 ZNFX1Q9P2E3 1918 aaKnown RBP10.13□□□□□ -0.79
USB1-212ENST00000566082 IRGMA1A4Y4 181 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 METTL15A6NJ78 407 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 PCDH8O95206 1070 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ADORA3P0DMS8 318 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 CBSLP0DN79 551 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 CBSP35520 551 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 RGS8P57771 180 aaPredicted RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 MACC1Q6ZN28 852 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 SLC25A37Q9NYZ2 338 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ERVW-1Q9UQF0 538 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 PRSS21Q9Y6M0 314 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 NUMA1Q14980 2115 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 MYADML2A6NDP7 307 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ANKRD28O15084 1053 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 CACNG3O60359 315 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 EOMESO95936 686 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 CXCR2P25025 360 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 KCNC4Q03721 635 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ZNF763Q0D2J5 394 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ZNF267Q14586 743 aaPredicted RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 PTGES3Q15185 160 aaKnown RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 LRRC26Q2I0M4 334 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 MPPE1Q53F39 396 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 Q6ZVL8 140 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 SERPINA11Q86U17 422 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 NOXA1Q86UR1 476 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ENTHD1Q8IYW4 607 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 IQCF1Q8N6M8 205 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ZNF431Q8TF32 576 aaPredicted RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 RAD51AP1Q96B01 352 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 TXNDC15Q96J42 360 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 RIOK2Q9BVS4 552 aaKnown RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 FAIM2Q9BWQ8 316 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms