RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 LINC00271P0C7V0 271 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 HOXD3P31249 432 aaPredicted RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 OR1D2P34982 312 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 TAGLN2P37802 199 aaKnown RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 MAGEA11P43364 429 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 OR3A3P47888 321 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 NUMBP49757 651 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 PEX5P50542 639 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 LBX1P52954 281 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 ABATP80404 500 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 RELQ04864 619 aaPredicted RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 SRSF1Q07955 248 aaKnown RBP eCLIP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 KLF9Q13886 244 aaPredicted RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 ADPRMQ3LIE5 342 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 C20orf194Q5TEA3 1177 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 TRNP1Q6NT89 227 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 CCDC73Q6ZRK6 1079 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 IL17RELQ6ZVW7 336 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 TECPR1Q7Z6L1 1165 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 TMEM219Q86XT9 240 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 GRAMD2AQ8IUY3 354 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 ZNF679Q8IYX0 411 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 NANOGP1Q8N7R0 232 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 FAM133AQ8N9E0 248 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 EIF1ADQ8N9N8 165 aaKnown RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 Q8N9P0 234 aaPredicted RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 C9orf106Q8NAJ2 232 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 OR56B2PQ8NGI1 322 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 OR52K2Q8NGK3 314 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 OR13C2Q8NGS9 318 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 ZBTB9Q96C00 473 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 MRPL53Q96EL3 112 aaKnown RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 SCMH1Q96GD3 660 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 ABHD8Q96I13 439 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 BTBD9Q96Q07 612 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 PCDHB18PQ96TA0 734 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 CCT7Q99832 543 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 CAPS2Q9BXY5 557 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 VCX2Q9H322 139 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 RAVER2Q9HCJ3 691 aaKnown RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 RBM28Q9NW13 759 aaKnown RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 RDH8Q9NYR8 311 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 TEKT2Q9UIF3 430 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 MRTO4Q9UKD2 239 aaKnown RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 VDAC3Q9Y277 283 aa4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 MRPS7Q9Y2R9 242 aaKnown RBP4.98□□□□□ -1.61
SOX2-OT-216ENST00000497122 ZNF521Q96K83 1311 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 A0A1B0GUL7 405 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 A8MUI8 341 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 FPGTO14772 594 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 ODC1P11926 461 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 CEACAM1P13688 526 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 PAX7P23759 505 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 TMOD1P28289 359 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 SLC1A3P43003 542 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 BRWD1-AS2P59051 145 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 CCNA1P78396 465 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 NME3Q13232 169 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 DDX39BQ13838 428 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 SQLEQ14534 574 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 HEPACAMQ14CZ8 416 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 SPHARQ15513 63 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 FILIP1LQ4L180 1135 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 SLC35D3Q5M8T2 416 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 LYPLAL1Q5VWZ2 237 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 NCR3LG1Q68D85 454 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 GFRALQ6UXV0 394 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 ZYG11AQ6WRX3 759 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 C17orf107Q6ZR85 190 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 COLCA1Q6ZS62 124 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 KMT5CQ86Y97 462 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 RPL36ALQ969Q0 106 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 RAB39BQ96DA2 213 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 GPR137Q96N19 417 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 ZNF583Q96ND8 569 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 FCRL4Q96PJ5 515 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 WDR76Q9H967 626 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 APOBEC3GQ9HC16 384 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 TM9SF3Q9HD45 589 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 ZNF701Q9NV72 531 aaPredicted RBP4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 TMEM30AQ9NV96 361 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 OCIAD1Q9NX40 245 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 SMARCAL1Q9NZC9 954 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 RALYQ9UKM9 306 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 CLEC4AQ9UMR7 237 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 RIPK3Q9Y572 518 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 DDX49Q9Y6V7 483 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 SPACA6W5XKT8 324 aa4.97□□□□□ -1.61
SOX2-OT-216ENST00000497122 B4GAT1O43505 415 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 PDE9AO76083 593 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 KIAA0754O94854 1291 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 MFN2O95140 757 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 MBD3O95983 291 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 EPOP01588 193 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 SFTPCP11686 197 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 PRF1P14222 555 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 ANPEPP15144 967 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 CYP3A5P20815 502 aa4.96□□□□□ -1.62
SOX2-OT-216ENST00000497122 CALB2P22676 271 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms