RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ZNF433Q8N7K0 673 aaPredicted RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 BRSK1Q8TDC3 778 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 GATAD2BQ8WXI9 593 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 FCRL4Q96PJ5 515 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 OR2B2Q9GZK3 357 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 SLC22A4Q9H015 551 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 MFSD1Q9H3U5 465 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 TPT1P8Q9HAU6 139 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 RLIMQ9NVW2 624 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 OSER1Q9NX31 292 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 PCTPQ9UKL6 214 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ANGPT4Q9Y264 503 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 LAMA2P24043 3122 aaKnown RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 A0A1W2PQ45 241 aaPredicted RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 A0A1W2PQY0 241 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 CD8B2A6NJW9 211 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 H0YJX3 145 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 GFRA2O00451 464 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 CCNB2O95067 398 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 HTR1AP08908 422 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 CD8BP10966 210 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 CSTF2P33240 577 aaKnown RBP eCLIP8.52□□□□□ -1.05
RTN4-206ENST00000394611 RGRP47804 291 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ISL1P61371 349 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 IQCCQ4KMZ1 466 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 FAM209AQ5JX71 171 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ATAT1Q5SQI0 421 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 GLB1LQ6UWU2 654 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 SLC16A12Q6ZSM3 486 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ABI3BPQ7Z7G0 1075 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ADGRG2Q8IZP9 1017 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 SYT14Q8NB59 555 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 GOLM1Q8NBJ4 401 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ZNF599Q96NL3 588 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 TFB2MQ9H5Q4 396 aaKnown RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 ZDHHC6Q9H6R6 413 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 NFKBIL1Q9UBC1 381 aaPredicted RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 CFL2Q9Y281 166 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ARL5CA6NH57 179 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 K7ERQ8 282 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 AREL1O15033 823 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 PAPSS2O95340 614 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 CLDN7O95471 211 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 CLDN9O95484 217 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SYPP08247 313 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 CELP19835 753 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 PROZP22891 400 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 APEX1P27695 318 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 RECQLP46063 649 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 RAB15P59190 212 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MAD2L1Q13257 205 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 PLD1Q13393 1074 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 BTN1A1Q13410 526 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 PIK3R6Q5UE93 754 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 LCN1P1Q5VSP4 162 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 KANK2Q63ZY3 851 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MZT2BQ6NZ67 158 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 LRRTM3Q86VH5 581 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 C1orf52Q8N6N3 182 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 ZNF431Q8TF32 576 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 TSPEARQ8WU66 669 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MYLIPQ8WY64 445 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TMEM106CQ9BVX2 250 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 HOXD1Q9GZZ0 328 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SAV1Q9H4B6 383 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 CLEC2DQ9UHP7 191 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 GNB5O14775 395 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MUSKO15146 869 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 PDYNP01213 254 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SLC11A2P49281 568 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MNX1P50219 401 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 OC90Q02509 493 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 PCDH1Q08174 1060 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MAD2L1BPQ15013 274 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 KCTD11Q693B1 232 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 PAQR9Q6ZVX9 377 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 CYS1Q717R9 158 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 NOXA1Q86UR1 476 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 ARHGAP12Q8IWW6 846 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 Q8N402 240 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SLC9A6Q92581 669 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 EXOSC8Q96B26 276 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 APIPQ96GX9 242 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 RACGAP1Q9H0H5 632 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SGK2Q9HBY8 427 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 GALNT9Q9HCQ5 603 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TMEM138Q9NPI0 162 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 GTF2IRD1Q9UHL9 959 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TNPO3Q9Y5L0 923 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 CFAP20Q9Y6A4 193 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 ARID2Q68CP9 1835 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 ASPDHA6ND91 283 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TTC34A8MYJ7 566 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 APEHP13798 732 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 MTHFD2P13995 350 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 PRKCAP17252 672 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms