RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR43, Length 209 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR43	snR43	BRE5	P53741	515 aa	Known RBP	3.14	□□□□□ -1.91
snR43	snR43	INM2	Q05533	292 aa		3.14	□□□□□ -1.91
snR43	snR43	FRT1	Q99332	602 aa		3.14	□□□□□ -1.91
snR43	snR43	DUR1,2	P32528	1835 aa	Known RBP	3.14	□□□□□ -1.91
snR43	snR43	HIP1	P06775	603 aa		3.13	□□□□□ -1.91
snR43	snR43	RPS19A	P07280	144 aa	Known RBP	3.13	□□□□□ -1.91
snR43	snR43	RPS19B	P07281	144 aa	Predicted RBP	3.13	□□□□□ -1.91
snR43	snR43	HEM1	P09950	548 aa	Predicted RBP	3.13	□□□□□ -1.91
snR43	snR43	RPC31	P17890	251 aa		3.13	□□□□□ -1.91
snR43	snR43	FPS1	P23900	669 aa		3.13	□□□□□ -1.91
snR43	snR43	MDL2	P33311	773 aa		3.13	□□□□□ -1.91
snR43	snR43	CST26	P38226	397 aa		3.13	□□□□□ -1.91
snR43	snR43	YHL050C	P38721	697 aa		3.13	□□□□□ -1.91
snR43	snR43	DYS1	P38791	387 aa		3.13	□□□□□ -1.91
snR43	snR43	YHR219W	P38900	624 aa		3.13	□□□□□ -1.91
snR43	snR43	HXT8	P40886	569 aa		3.13	□□□□□ -1.91
snR43	snR43	RGD2	P43556	714 aa		3.13	□□□□□ -1.91
snR43	snR43	YNR014W	P53719	212 aa		3.13	□□□□□ -1.91
snR43	snR43	YAF9	P53930	226 aa		3.13	□□□□□ -1.91
snR43	snR43	UTP4	Q06679	776 aa	Known RBP	3.13	□□□□□ -1.91
snR43	snR43	YDL124W	Q07551	312 aa	Known RBP	3.13	□□□□□ -1.91
snR43	snR43	YDL144C	Q07589	356 aa		3.13	□□□□□ -1.91
snR43	snR43	NOP8	Q08287	484 aa	Predicted RBP	3.13	□□□□□ -1.91
snR43	snR43	TOR2	P32600	2474 aa	Known RBP	3.13	□□□□□ -1.91
snR43	snR43	MRP10	O75012	95 aa		3.12	□□□□□ -1.91
snR43	snR43	KRS1	P15180	591 aa	Known RBP	3.12	□□□□□ -1.91
snR43	snR43	VMA2	P16140	517 aa	Known RBP	3.12	□□□□□ -1.91
snR43	snR43	LYS5	P50113	272 aa		3.12	□□□□□ -1.91
snR43	snR43	PIP2	P52960	996 aa		3.12	□□□□□ -1.91
snR43	snR43	YNL193W	P53870	558 aa		3.12	□□□□□ -1.91
snR43	snR43	YML037C	Q03703	340 aa		3.12	□□□□□ -1.91
snR43	snR43	NUT2	Q06213	157 aa		3.12	□□□□□ -1.91
snR43	snR43	SYT1	Q06836	1226 aa		3.12	□□□□□ -1.91
snR43	snR43	YOR296W	Q08748	1289 aa		3.12	□□□□□ -1.91
snR43	snR43	KEL3	Q08979	651 aa	Predicted RBP	3.12	□□□□□ -1.91
snR43	snR43	APC11	Q12157	165 aa		3.12	□□□□□ -1.91
snR43	snR43	GRX7	P38068	203 aa		3.11	□□□□□ -1.91
snR43	snR43	GIP1	P38229	639 aa		3.11	□□□□□ -1.91
snR43	snR43	APM2	P38700	605 aa		3.11	□□□□□ -1.91
snR43	snR43	RAD55	P38953	406 aa		3.11	□□□□□ -1.91
snR43	snR43	YGR125W	P53273	1036 aa		3.11	□□□□□ -1.91
snR43	snR43	TY1A-DR2	Q03964	440 aa	Known RBP	3.11	□□□□□ -1.91
snR43	snR43	CSI1	Q04368	295 aa		3.11	□□□□□ -1.91
snR43	snR43	DUS4	Q06063	367 aa		3.11	□□□□□ -1.91
snR43	snR43	RPN7	Q06103	429 aa	Known RBP	3.11	□□□□□ -1.91
snR43	snR43	SKG3	Q06315	1026 aa		3.11	□□□□□ -1.91
snR43	snR43	GPI13	Q07830	1017 aa		3.11	□□□□□ -1.91
snR43	snR43	LAP2	Q10740	671 aa		3.11	□□□□□ -1.91
snR43	snR43	RRI2	Q12348	645 aa		3.11	□□□□□ -1.91
snR43	snR43	DAL5	P15365	543 aa		3.1	□□□□□ -1.91
snR43	snR43	SRM1	P21827	482 aa		3.1	□□□□□ -1.91
snR43	snR43	PRE8	P23639	250 aa		3.1	□□□□□ -1.91
snR43	snR43	YKR018C	P36114	725 aa		3.1	□□□□□ -1.91
snR43	snR43	ISW1	P38144	1129 aa		3.1	□□□□□ -1.91
snR43	snR43	NCL1	P38205	684 aa	Known RBP	3.1	□□□□□ -1.91
snR43	snR43	TOM71	P38825	639 aa	Known RBP	3.1	□□□□□ -1.91
snR43	snR43	FUN12	P39730	1002 aa	Known RBP	3.1	□□□□□ -1.91
snR43	snR43	NOC2	P39744	710 aa	Known RBP	3.1	□□□□□ -1.91
snR43	snR43	SKP2	P42843	763 aa		3.1	□□□□□ -1.91
snR43	snR43	JJJ3	P47138	172 aa		3.1	□□□□□ -1.91
snR43	snR43	SOL4	P53315	255 aa		3.1	□□□□□ -1.91
snR43	snR43	ALD6	P54115	500 aa	Known RBP	3.1	□□□□□ -1.91
snR43	snR43	EMG1	Q06287	252 aa	Known RBP	3.1	□□□□□ -1.91
snR43	snR43	WHI5	Q12416	295 aa		3.1	□□□□□ -1.91
snR43	snR43	LAM4	P38800	1345 aa		3.1	□□□□□ -1.91
snR43	snR43	RPP0	P05317	312 aa	Known RBP	3.09	□□□□□ -1.91
snR43	snR43	IDI1	P15496	288 aa		3.09	□□□□□ -1.91
snR43	snR43	SUI2	P20459	304 aa	Known RBP	3.09	□□□□□ -1.91
snR43	snR43	GCD7	P32502	381 aa	Predicted RBP	3.09	□□□□□ -1.91
snR43	snR43	UTR4	P32626	227 aa		3.09	□□□□□ -1.91
snR43	snR43	TIM23	P32897	222 aa		3.09	□□□□□ -1.91
snR43	snR43	MDJ1	P35191	511 aa		3.09	□□□□□ -1.91
snR43	snR43	POA1	P38218	177 aa		3.09	□□□□□ -1.91
snR43	snR43	PRK1	P40494	810 aa		3.09	□□□□□ -1.91
snR43	snR43	RSC8	P43609	557 aa	Known RBP	3.09	□□□□□ -1.91
snR43	snR43	ACF4	P47129	309 aa		3.09	□□□□□ -1.91
snR43	snR43	FOL2	P51601	243 aa	Known RBP	3.09	□□□□□ -1.91
snR43	snR43	SKP1	P52286	194 aa		3.09	□□□□□ -1.91
snR43	snR43	TRS120	Q04183	1289 aa		3.09	□□□□□ -1.91
snR43	snR43	YPL260W	Q08977	551 aa		3.09	□□□□□ -1.91
snR43	snR43	DAP1	Q12091	152 aa		3.09	□□□□□ -1.91
snR43	snR43	MNL2	Q12205	849 aa		3.09	□□□□□ -1.91
snR43	snR43	YDR461C-A	Q2V2P7	80 aa		3.09	□□□□□ -1.91
snR43	snR43	YDR524C-B	Q3E6R4	66 aa		3.09	□□□□□ -1.91
snR43	snR43	TEL1	P38110	2787 aa		3.09	□□□□□ -1.92
snR43	snR43	RAD18	P10862	487 aa		3.08	□□□□□ -1.92
snR43	snR43	YUR1	P26725	428 aa		3.08	□□□□□ -1.92
snR43	snR43	SRP40	P32583	406 aa	Predicted RBP	3.08	□□□□□ -1.92
snR43	snR43	TGL1	P34163	548 aa		3.08	□□□□□ -1.92
snR43	snR43	AIM46	P38885	310 aa		3.08	□□□□□ -1.92
snR43	snR43	JHD1	P40034	492 aa		3.08	□□□□□ -1.92
snR43	snR43	PSY2	P40164	858 aa		3.08	□□□□□ -1.92
snR43	snR43	YIL165C	P40446	119 aa		3.08	□□□□□ -1.92
snR43	snR43	SBE2	P42223	864 aa	Known RBP	3.08	□□□□□ -1.92
snR43	snR43	IOC3	P43596	787 aa		3.08	□□□□□ -1.92
snR43	snR43	PPT1	P53043	513 aa		3.08	□□□□□ -1.92
snR43	snR43	BUL2	Q03758	920 aa	Known RBP	3.08	□□□□□ -1.92
snR43	snR43	PUS1	Q12211	544 aa	Known RBP	3.08	□□□□□ -1.92
snR43	snR43	GPM1	P00950	247 aa	Known RBP	3.07	□□□□□ -1.92
snR43	snR43	POX1	P13711	748 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms