RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C YOR131CQ12486 218 aa5.72□□□□□ -1.49
PML39YML107C STE5P32917 917 aa5.71□□□□□ -1.5
PML39YML107C OCA5P38738 679 aa5.71□□□□□ -1.5
PML39YML107C PRP43P53131 767 aaKnown RBP5.71□□□□□ -1.5
PML39YML107C EAF1Q06337 982 aa5.71□□□□□ -1.5
PML39YML107C PPH3P32345 308 aa5.7□□□□□ -1.5
PML39YML107C HSP78P33416 811 aa5.7□□□□□ -1.5
PML39YML107C ERP6P53198 216 aa5.7□□□□□ -1.5
PML39YML107C SRP1Q02821 542 aaKnown RBP5.7□□□□□ -1.5
PML39YML107C DUS3Q06053 668 aaKnown RBP5.7□□□□□ -1.5
PML39YML107C YDR306CQ06640 478 aa5.7□□□□□ -1.5
PML39YML107C STI1P15705 589 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
PML39YML107C GAS1P22146 559 aaKnown RBP5.69□□□□□ -1.5
PML39YML107C ARE1P25628 610 aa5.69□□□□□ -1.5
PML39YML107C AAR2P32357 355 aaPredicted RBP5.69□□□□□ -1.5
PML39YML107C YKL091CP33324 310 aaKnown RBP5.69□□□□□ -1.5
PML39YML107C SAH1P39954 449 aaKnown RBP5.69□□□□□ -1.5
PML39YML107C HUL5P53119 910 aa5.69□□□□□ -1.5
PML39YML107C YGR125WP53273 1036 aa5.69□□□□□ -1.5
PML39YML107C NSE3Q05541 303 aa5.69□□□□□ -1.5
PML39YML107C SVS1Q12254 260 aa5.69□□□□□ -1.5
PML39YML107C HSP60P19882 572 aaKnown RBP5.68□□□□□ -1.5
PML39YML107C SCT1P32784 759 aa5.68□□□□□ -1.5
PML39YML107C SLA2P33338 968 aa5.68□□□□□ -1.5
PML39YML107C RFC5P38251 354 aa5.68□□□□□ -1.5
PML39YML107C TAT2P38967 592 aa5.68□□□□□ -1.5
PML39YML107C SEC26P41810 973 aaKnown RBP5.68□□□□□ -1.5
PML39YML107C ALR2P43553 858 aa5.68□□□□□ -1.5
PML39YML107C FMP25Q08023 583 aa5.68□□□□□ -1.5
PML39YML107C BI4P03879 638 aa5.67□□□□□ -1.5
PML39YML107C RPL8BP29453 256 aaKnown RBP5.67□□□□□ -1.5
PML39YML107C BDF2Q07442 638 aa5.67□□□□□ -1.5
PML39YML107C YTA7P40340 1379 aa5.67□□□□□ -1.5
PML39YML107C CDC11P32458 415 aa5.66□□□□□ -1.5
PML39YML107C YKL222CP35995 705 aa5.66□□□□□ -1.5
PML39YML107C HUL4P40985 892 aa5.66□□□□□ -1.5
PML39YML107C IOC3P43596 787 aa5.66□□□□□ -1.5
PML39YML107C PFD1P46988 109 aa5.66□□□□□ -1.5
PML39YML107C ENV11P53246 860 aa5.66□□□□□ -1.5
PML39YML107C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
PML39YML107C RSM24Q03976 319 aa5.66□□□□□ -1.5
PML39YML107C UBX5Q06682 500 aa5.66□□□□□ -1.5
PML39YML107C FLC1Q08967 793 aa5.66□□□□□ -1.5
PML39YML107C LPX1Q12405 387 aaKnown RBP5.66□□□□□ -1.5
PML39YML107C ADE8P04161 214 aa5.65□□□□□ -1.5
PML39YML107C KIN2P13186 1147 aaKnown RBP5.65□□□□□ -1.5
PML39YML107C CCC2P38995 1004 aa5.65□□□□□ -1.5
PML39YML107C RRT14P40470 206 aa5.65□□□□□ -1.5
PML39YML107C UTP8P53276 713 aaKnown RBP5.65□□□□□ -1.5
PML39YML107C YOR352WQ08816 343 aa5.65□□□□□ -1.5
PML39YML107C ACE2P21192 770 aa5.64□□□□□ -1.51
PML39YML107C APL1P27351 700 aa5.64□□□□□ -1.51
PML39YML107C GUS1P46655 708 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
PML39YML107C ORC3P54790 616 aa5.64□□□□□ -1.51
PML39YML107C HRQ1Q05549 1077 aa5.64□□□□□ -1.51
PML39YML107C CIT1P00890 479 aa5.63□□□□□ -1.51
PML39YML107C YRO2P38079 344 aa5.63□□□□□ -1.51
PML39YML107C ETP1P38748 585 aaKnown RBP5.63□□□□□ -1.51
PML39YML107C ATG13Q06628 738 aa5.63□□□□□ -1.51
PML39YML107C YDL124WQ07551 312 aaKnown RBP5.63□□□□□ -1.51
PML39YML107C OSW2Q12202 724 aa5.63□□□□□ -1.51
PML39YML107C GAL11P19659 1081 aa5.62□□□□□ -1.51
PML39YML107C YCR015CP25616 317 aa5.62□□□□□ -1.51
PML39YML107C CDC12P32468 407 aaKnown RBP5.62□□□□□ -1.51
PML39YML107C GGA2P38817 585 aaKnown RBP5.62□□□□□ -1.51
PML39YML107C OSW7P43611 510 aa5.62□□□□□ -1.51
PML39YML107C MDM38Q08179 573 aa5.62□□□□□ -1.51
PML39YML107C YLL058WQ12198 575 aa5.62□□□□□ -1.51
PML39YML107C YBR284WP38150 797 aa5.61□□□□□ -1.51
PML39YML107C YHR020WP38708 688 aaKnown RBP5.61□□□□□ -1.51
PML39YML107C RSP5P39940 809 aaKnown RBP5.61□□□□□ -1.51
PML39YML107C FPR4Q06205 392 aaPredicted RBP5.61□□□□□ -1.51
PML39YML107C ESC8Q08119 714 aa5.61□□□□□ -1.51
PML39YML107C HBS1P32769 611 aaKnown RBP5.6□□□□□ -1.51
PML39YML107C YKL151CP36059 337 aa5.6□□□□□ -1.51
PML39YML107C SNO2P53823 222 aa5.6□□□□□ -1.51
PML39YML107C RPN4Q03465 531 aa5.6□□□□□ -1.51
PML39YML107C YPR196WQ06595 470 aa5.6□□□□□ -1.51
PML39YML107C CDA2Q06703 312 aa5.6□□□□□ -1.51
PML39YML107C CYC1P00044 109 aaPredicted RBP5.59□□□□□ -1.51
PML39YML107C CMP2P14747 604 aa5.59□□□□□ -1.51
PML39YML107C PBP2P38151 413 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
PML39YML107C SIT1P39980 628 aa5.59□□□□□ -1.51
PML39YML107C CHZ1P40019 153 aaPredicted RBP5.59□□□□□ -1.51
PML39YML107C HFM1P51979 1187 aa5.59□□□□□ -1.51
PML39YML107C SRT1Q03175 343 aa5.59□□□□□ -1.51
PML39YML107C YPR071WQ12346 211 aa5.59□□□□□ -1.51
PML39YML107C CAN1P04817 590 aa5.58□□□□□ -1.52
PML39YML107C FUN30P31380 1131 aa5.58□□□□□ -1.52
PML39YML107C MTC3P53077 123 aa5.58□□□□□ -1.52
PML39YML107C TAF8Q03750 510 aa5.58□□□□□ -1.52
PML39YML107C LCD1Q04377 747 aa5.58□□□□□ -1.52
PML39YML107C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
PML39YML107C HBN1Q96VH4 193 aa5.58□□□□□ -1.52
PML39YML107C TOM70P07213 617 aaKnown RBP5.57□□□□□ -1.52
PML39YML107C TSA1P34760 196 aaKnown RBP5.57□□□□□ -1.52
PML39YML107C ABZ1P37254 787 aaPredicted RBP5.57□□□□□ -1.52
PML39YML107C GIC1P38785 314 aa5.57□□□□□ -1.52
PML39YML107C YER158CP40095 573 aa5.57□□□□□ -1.52
PML39YML107C CCM1P48237 864 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms