RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W YKL107WP34251 309 aa4.23□□□□□ -1.73
PDP3YLR455W MCM7P38132 845 aa4.23□□□□□ -1.73
PDP3YLR455W RFC5P38251 354 aa4.23□□□□□ -1.73
PDP3YLR455W TAT2P38967 592 aa4.23□□□□□ -1.73
PDP3YLR455W YGL176CP46945 554 aa4.23□□□□□ -1.73
PDP3YLR455W YJL049WP47048 450 aa4.23□□□□□ -1.73
PDP3YLR455W SPT20P50875 604 aa4.23□□□□□ -1.73
PDP3YLR455W GCN5Q03330 439 aa4.23□□□□□ -1.73
PDP3YLR455W ROT1Q03691 256 aa4.23□□□□□ -1.73
PDP3YLR455W RSM24Q03976 319 aa4.23□□□□□ -1.73
PDP3YLR455W FAL1Q12099 399 aaKnown RBP4.23□□□□□ -1.73
PDP3YLR455W RPL11BQ3E757 174 aaPredicted RBP4.23□□□□□ -1.73
PDP3YLR455W THS1P04801 734 aaKnown RBP4.22□□□□□ -1.73
PDP3YLR455W DBP2P24783 546 aaKnown RBP4.22□□□□□ -1.73
PDP3YLR455W ABD1P32783 436 aaPredicted RBP4.22□□□□□ -1.73
PDP3YLR455W SLA2P33338 968 aa4.22□□□□□ -1.73
PDP3YLR455W MRP8P35719 219 aa4.22□□□□□ -1.73
PDP3YLR455W PLB2Q03674 706 aa4.22□□□□□ -1.73
PDP3YLR455W CLU1Q03690 1277 aaKnown RBP4.22□□□□□ -1.73
PDP3YLR455W ACM1Q08981 209 aa4.22□□□□□ -1.73
PDP3YLR455W MOT2P34909 587 aaKnown RBP4.21□□□□□ -1.74
PDP3YLR455W YKL069WP36088 180 aa4.21□□□□□ -1.74
PDP3YLR455W VBA5P36172 582 aa4.21□□□□□ -1.74
PDP3YLR455W IRR1P40541 1150 aa4.21□□□□□ -1.74
PDP3YLR455W NNF1P47149 201 aa4.21□□□□□ -1.74
PDP3YLR455W SPP382Q06411 708 aaPredicted RBP4.21□□□□□ -1.74
PDP3YLR455W WRS1Q12109 432 aaKnown RBP4.21□□□□□ -1.74
PDP3YLR455W YLL058WQ12198 575 aa4.21□□□□□ -1.74
PDP3YLR455W SVS1Q12254 260 aa4.21□□□□□ -1.74
PDP3YLR455W GAL10P04397 699 aa4.2□□□□□ -1.74
PDP3YLR455W CMP2P14747 604 aa4.2□□□□□ -1.74
PDP3YLR455W SRM1P21827 482 aa4.2□□□□□ -1.74
PDP3YLR455W GRX1P25373 110 aaKnown RBP4.2□□□□□ -1.74
PDP3YLR455W SCT1P32784 759 aa4.2□□□□□ -1.74
PDP3YLR455W PBY1P38254 753 aa4.2□□□□□ -1.74
PDP3YLR455W MXR1P40029 184 aa4.2□□□□□ -1.74
PDP3YLR455W RRT14P40470 206 aa4.2□□□□□ -1.74
PDP3YLR455W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
PDP3YLR455W DUS4Q06063 367 aa4.2□□□□□ -1.74
PDP3YLR455W ESC2Q06340 456 aa4.2□□□□□ -1.74
PDP3YLR455W TDA5Q06417 326 aaKnown RBP4.2□□□□□ -1.74
PDP3YLR455W KIN2P13186 1147 aaKnown RBP4.19□□□□□ -1.74
PDP3YLR455W APL1P27351 700 aa4.19□□□□□ -1.74
PDP3YLR455W SHM2P37291 469 aaKnown RBP4.19□□□□□ -1.74
PDP3YLR455W MTC3P53077 123 aa4.19□□□□□ -1.74
PDP3YLR455W RIB2Q12362 591 aaKnown RBP4.19□□□□□ -1.74
PDP3YLR455W PRI2P20457 528 aa4.18□□□□□ -1.74
PDP3YLR455W ACE2P21192 770 aa4.18□□□□□ -1.74
PDP3YLR455W CTS1P29029 562 aa4.18□□□□□ -1.74
PDP3YLR455W STE5P32917 917 aa4.18□□□□□ -1.74
PDP3YLR455W YKL151CP36059 337 aa4.18□□□□□ -1.74
PDP3YLR455W UGA2P38067 497 aa4.18□□□□□ -1.74
PDP3YLR455W OCA5P38738 679 aa4.18□□□□□ -1.74
PDP3YLR455W GUS1P46655 708 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
PDP3YLR455W UTP8P53276 713 aaKnown RBP4.18□□□□□ -1.74
PDP3YLR455W NAN1Q02931 896 aaKnown RBP4.18□□□□□ -1.74
PDP3YLR455W DOM34P33309 386 aa4.17□□□□□ -1.74
PDP3YLR455W MPT5P39016 859 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74 RIP-Chip
PDP3YLR455W MBP1P39678 833 aa4.17□□□□□ -1.74
PDP3YLR455W SIZ1Q04195 904 aa4.17□□□□□ -1.74
PDP3YLR455W RXT3Q07458 294 aa4.17□□□□□ -1.74
PDP3YLR455W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
PDP3YLR455W BI4P03879 638 aa4.16□□□□□ -1.74
PDP3YLR455W CDC12P32468 407 aaKnown RBP4.16□□□□□ -1.74
PDP3YLR455W YBR184WP38299 523 aa4.16□□□□□ -1.74
PDP3YLR455W PBP1P53297 722 aaKnown RBP4.16□□□□□ -1.74
PDP3YLR455W ACK1Q07622 623 aaPredicted RBP4.16□□□□□ -1.74
PDP3YLR455W FMP25Q08023 583 aa4.16□□□□□ -1.74
PDP3YLR455W GPB1Q08886 897 aa4.16□□□□□ -1.74
PDP3YLR455W CDC20P26309 610 aa4.15□□□□□ -1.75
PDP3YLR455W RPL8BP29453 256 aaKnown RBP4.15□□□□□ -1.75
PDP3YLR455W SIT1P39980 628 aa4.15□□□□□ -1.75
PDP3YLR455W PFD1P46988 109 aa4.15□□□□□ -1.75
PDP3YLR455W SRP1Q02821 542 aaKnown RBP4.15□□□□□ -1.75
PDP3YLR455W GSF2Q04697 403 aaKnown RBP4.15□□□□□ -1.75
PDP3YLR455W HRQ1Q05549 1077 aa4.15□□□□□ -1.75
PDP3YLR455W SPO75Q07798 868 aa4.15□□□□□ -1.75
PDP3YLR455W MDM38Q08179 573 aa4.15□□□□□ -1.75
PDP3YLR455W TUB2P02557 457 aaKnown RBP4.14□□□□□ -1.75
PDP3YLR455W CDC6P09119 513 aa4.14□□□□□ -1.75
PDP3YLR455W STI1P15705 589 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
PDP3YLR455W PRP9P19736 530 aaKnown RBP4.14□□□□□ -1.75
PDP3YLR455W GTF1P53260 183 aaPredicted RBP4.14□□□□□ -1.75
PDP3YLR455W MSC2Q03455 724 aa4.14□□□□□ -1.75
PDP3YLR455W NSE3Q05541 303 aa4.14□□□□□ -1.75
PDP3YLR455W FUN30P31380 1131 aa4.13□□□□□ -1.75
PDP3YLR455W RPC82P32349 654 aa4.13□□□□□ -1.75
PDP3YLR455W YKR078WP36158 585 aaKnown RBP4.13□□□□□ -1.75
PDP3YLR455W YBR238CP38330 731 aaKnown RBP4.13□□□□□ -1.75
PDP3YLR455W GYP7P48365 746 aa4.13□□□□□ -1.75
PDP3YLR455W HFM1P51979 1187 aa4.13□□□□□ -1.75
PDP3YLR455W SRT1Q03175 343 aa4.13□□□□□ -1.75
PDP3YLR455W YOL098CQ12496 1037 aa4.13□□□□□ -1.75
PDP3YLR455W RAD4P14736 754 aa4.12□□□□□ -1.75
PDP3YLR455W HBS1P32769 611 aaKnown RBP4.12□□□□□ -1.75
PDP3YLR455W LST4P34239 828 aa4.12□□□□□ -1.75
PDP3YLR455W YHR020WP38708 688 aaKnown RBP4.12□□□□□ -1.75
PDP3YLR455W YAP1801P38856 637 aa4.12□□□□□ -1.75
PDP3YLR455W GCV2P49095 1034 aa4.12□□□□□ -1.75
PDP3YLR455W ERP6P53198 216 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms