RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR400W	YLR400W	SVF1	Q05515	481 aa		4.69	□□□□□ -1.66
YLR400W	YLR400W	TMA46	Q12000	345 aa	Known RBP	4.69	□□□□□ -1.66
YLR400W	YLR400W	GNT1	Q12096	491 aa		4.69	□□□□□ -1.66
YLR400W	YLR400W	DUT1	P33317	147 aa		4.68	□□□□□ -1.66
YLR400W	YLR400W	MCM7	P38132	845 aa		4.68	□□□□□ -1.66
YLR400W	YLR400W	VPS62	P53285	467 aa		4.68	□□□□□ -1.66
YLR400W	YLR400W	MSC2	Q03455	724 aa		4.68	□□□□□ -1.66
YLR400W	YLR400W	OYE2	Q03558	400 aa	Known RBP	4.68	□□□□□ -1.66
YLR400W	YLR400W	ACM1	Q08981	209 aa		4.68	□□□□□ -1.66
YLR400W	YLR400W	BI4	P03879	638 aa		4.67	□□□□□ -1.66
YLR400W	YLR400W	SLA2	P33338	968 aa		4.67	□□□□□ -1.66
YLR400W	YLR400W	PNT1	P38969	423 aa		4.67	□□□□□ -1.66
YLR400W	YLR400W	GCV2	P49095	1034 aa		4.67	□□□□□ -1.66
YLR400W	YLR400W	MNN10	P50108	393 aa	Known RBP	4.67	□□□□□ -1.66
YLR400W	YLR400W	GTF1	P53260	183 aa	Predicted RBP	4.67	□□□□□ -1.66
YLR400W	YLR400W	RMD1	Q03441	430 aa		4.67	□□□□□ -1.66
YLR400W	YLR400W	IOC4	Q04213	475 aa		4.67	□□□□□ -1.66
YLR400W	YLR400W	TRM2	P33753	639 aa		4.66	□□□□□ -1.66
YLR400W	YLR400W	RRT14	P40470	206 aa		4.66	□□□□□ -1.66
YLR400W	YLR400W	HFM1	P51979	1187 aa		4.66	□□□□□ -1.66
YLR400W	YLR400W	MCM6	P53091	1017 aa	Known RBP	4.66	□□□□□ -1.66
YLR400W	YLR400W	PNS1	Q12412	539 aa		4.66	□□□□□ -1.66
YLR400W	YLR400W	STE11	P23561	717 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	MTC3	P53077	123 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	EEB1	Q02891	456 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
YLR400W	YLR400W	YAP6	Q03935	383 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	YLR224W	Q05947	369 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	TMA10	Q06177	86 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	HMI1	Q12039	706 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	PUS9	Q12069	462 aa		4.65	□□□□□ -1.67
YLR400W	YLR400W	HCM1	P25364	564 aa		4.64	□□□□□ -1.67
YLR400W	YLR400W	EMC1	P25574	760 aa		4.64	□□□□□ -1.67
YLR400W	YLR400W	LYP1	P32487	611 aa		4.64	□□□□□ -1.67
YLR400W	YLR400W	SPP382	Q06411	708 aa	Predicted RBP	4.64	□□□□□ -1.67
YLR400W	YLR400W	TRP2	P00899	507 aa	Known RBP	4.63	□□□□□ -1.67
YLR400W	YLR400W	THS1	P04801	734 aa	Known RBP	4.63	□□□□□ -1.67
YLR400W	YLR400W	CDC34	P14682	295 aa		4.63	□□□□□ -1.67
YLR400W	YLR400W	MND2	P40577	368 aa		4.63	□□□□□ -1.67
YLR400W	YLR400W	TYW3	P53177	273 aa		4.63	□□□□□ -1.67
YLR400W	YLR400W	YPL066W	Q12194	479 aa		4.63	□□□□□ -1.67
YLR400W	YLR400W	NTO1	Q12311	748 aa		4.63	□□□□□ -1.67
YLR400W	YLR400W	INO1	P11986	533 aa		4.62	□□□□□ -1.67
YLR400W	YLR400W	SIP5	P40210	489 aa	Known RBP	4.62	□□□□□ -1.67
YLR400W	YLR400W	NNF1	P47149	201 aa		4.62	□□□□□ -1.67
YLR400W	YLR400W	PHO23	P50947	330 aa		4.62	□□□□□ -1.67
YLR400W	YLR400W	SLI1	P53304	468 aa		4.62	□□□□□ -1.67
YLR400W	YLR400W	TPO1	Q07824	586 aa		4.62	□□□□□ -1.67
YLR400W	YLR400W	XYL2	Q07993	356 aa		4.62	□□□□□ -1.67
YLR400W	YLR400W	PMA1	P05030	918 aa	Known RBP	4.61	□□□□□ -1.67
YLR400W	YLR400W	DCG1	P32460	244 aa		4.61	□□□□□ -1.67
YLR400W	YLR400W	MOT2	P34909	587 aa	Known RBP	4.61	□□□□□ -1.67
YLR400W	YLR400W	YKL151C	P36059	337 aa		4.61	□□□□□ -1.67
YLR400W	YLR400W	PLB1	P39105	664 aa		4.61	□□□□□ -1.67
YLR400W	YLR400W	MSE1	P48525	536 aa		4.61	□□□□□ -1.67
YLR400W	YLR400W	SUN4	P53616	420 aa		4.61	□□□□□ -1.67
YLR400W	YLR400W	NOP12	Q08208	459 aa	Known RBP	4.61	□□□□□ -1.67
YLR400W	YLR400W	PET112	P33893	541 aa		4.6	□□□□□ -1.67
YLR400W	YLR400W	CHA4	P43634	648 aa		4.6	□□□□□ -1.67
YLR400W	YLR400W	MET12	P46151	657 aa		4.6	□□□□□ -1.67
YLR400W	YLR400W	YGL176C	P46945	554 aa		4.6	□□□□□ -1.67
YLR400W	YLR400W	YLR225C	Q05948	407 aa	Known RBP	4.6	□□□□□ -1.67
YLR400W	YLR400W	JIP5	Q06214	492 aa	Predicted RBP	4.6	□□□□□ -1.67
YLR400W	YLR400W	ADY3	Q07732	790 aa		4.6	□□□□□ -1.67
YLR400W	YLR400W	RKM4	Q12504	494 aa		4.6	□□□□□ -1.67
YLR400W	YLR400W	ZRG8	P40021	1076 aa		4.59	□□□□□ -1.67
YLR400W	YLR400W	DOS2	P54858	310 aa		4.59	□□□□□ -1.67
YLR400W	YLR400W	HIS5	P07172	385 aa		4.58	□□□□□ -1.68
YLR400W	YLR400W	PMI40	P29952	429 aa	Known RBP	4.58	□□□□□ -1.68
YLR400W	YLR400W	MNR2	P35724	969 aa		4.58	□□□□□ -1.68
YLR400W	YLR400W	POA1	P38218	177 aa		4.58	□□□□□ -1.68
YLR400W	YLR400W	YAP1801	P38856	637 aa		4.58	□□□□□ -1.68
YLR400W	YLR400W	YGR053C	P53234	283 aa		4.58	□□□□□ -1.68
YLR400W	YLR400W	GIS1	Q03833	894 aa		4.58	□□□□□ -1.68
YLR400W	YLR400W	OSW2	Q12202	724 aa		4.58	□□□□□ -1.68
YLR400W	YLR400W	ENA1	P13587	1091 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	YKL107W	P34251	309 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	DEF1	P35732	738 aa	Known RBP	4.57	□□□□□ -1.68
YLR400W	YLR400W	ENA2	Q01896	1091 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	VPS16	Q03308	798 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	HRQ1	Q05549	1077 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	FPR4	Q06205	392 aa	Predicted RBP	4.57	□□□□□ -1.68
YLR400W	YLR400W	PIN2	Q12057	282 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	ENA5	Q12691	1091 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	TAD3	Q9URQ3	322 aa		4.57	□□□□□ -1.68
YLR400W	YLR400W	CTF4	Q01454	927 aa		4.56	□□□□□ -1.68
YLR400W	YLR400W	MDM38	Q08179	573 aa		4.56	□□□□□ -1.68
YLR400W	YLR400W	YLL058W	Q12198	575 aa		4.56	□□□□□ -1.68
YLR400W	YLR400W	YOL098C	Q12496	1037 aa		4.56	□□□□□ -1.68
YLR400W	YLR400W	SPC42	P36094	363 aa		4.55	□□□□□ -1.68
YLR400W	YLR400W	ECM21	P38167	1117 aa	Known RBP	4.55	□□□□□ -1.68
YLR400W	YLR400W	BRN1	P38170	754 aa		4.55	□□□□□ -1.68
YLR400W	YLR400W	VAC8	P39968	578 aa		4.55	□□□□□ -1.68
YLR400W	YLR400W	AIM21	P40563	679 aa		4.55	□□□□□ -1.68
YLR400W	YLR400W	ALD6	P54115	500 aa	Known RBP	4.55	□□□□□ -1.68
YLR400W	YLR400W	SPO20	Q04359	397 aa		4.55	□□□□□ -1.68
YLR400W	YLR400W	ESC2	Q06340	456 aa		4.55	□□□□□ -1.68
YLR400W	YLR400W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
YLR400W	YLR400W	CHS7	P38843	316 aa		4.54	□□□□□ -1.68
YLR400W	YLR400W	MSS4	P38994	779 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms