RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W SNO2P53823 222 aa5.2□□□□□ -1.58
VPS38YLR360W CYC1P00044 109 aaPredicted RBP5.19□□□□□ -1.58
VPS38YLR360W KIN2P13186 1147 aaKnown RBP5.19□□□□□ -1.58
VPS38YLR360W ACE2P21192 770 aa5.19□□□□□ -1.58
VPS38YLR360W YBR184WP38299 523 aa5.19□□□□□ -1.58
VPS38YLR360W SAH1P39954 449 aaKnown RBP5.19□□□□□ -1.58
VPS38YLR360W PRP43P53131 767 aaKnown RBP5.19□□□□□ -1.58
VPS38YLR360W DUS3Q06053 668 aaKnown RBP5.19□□□□□ -1.58
VPS38YLR360W ATG13Q06628 738 aa5.19□□□□□ -1.58
VPS38YLR360W CMP2P14747 604 aa5.18□□□□□ -1.58
VPS38YLR360W PBY1P38254 753 aa5.18□□□□□ -1.58
VPS38YLR360W IRR1P40541 1150 aa5.18□□□□□ -1.58
VPS38YLR360W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
VPS38YLR360W STE5P32917 917 aa5.17□□□□□ -1.58
VPS38YLR360W RRT14P40470 206 aa5.17□□□□□ -1.58
VPS38YLR360W SRP1Q02821 542 aaKnown RBP5.17□□□□□ -1.58
VPS38YLR360W HRQ1Q05549 1077 aa5.17□□□□□ -1.58
VPS38YLR360W YDR306CQ06640 478 aa5.17□□□□□ -1.58
VPS38YLR360W ELM1P32801 640 aa5.16□□□□□ -1.58
VPS38YLR360W YKL151CP36059 337 aa5.16□□□□□ -1.58
VPS38YLR360W AIM3P38266 947 aaKnown RBP5.16□□□□□ -1.58
VPS38YLR360W NIT1P40447 199 aa5.16□□□□□ -1.58
VPS38YLR360W HFM1P51979 1187 aa5.16□□□□□ -1.58
VPS38YLR360W NAN1Q02931 896 aaKnown RBP5.16□□□□□ -1.58
VPS38YLR360W ROT1Q03691 256 aa5.16□□□□□ -1.58
VPS38YLR360W SGD1Q06132 899 aa5.16□□□□□ -1.58
VPS38YLR360W OSW2Q12202 724 aa5.16□□□□□ -1.58
VPS38YLR360W GAL10P04397 699 aa5.15□□□□□ -1.59
VPS38YLR360W PPH3P32345 308 aa5.15□□□□□ -1.59
VPS38YLR360W TSA1P34760 196 aaKnown RBP5.15□□□□□ -1.59
VPS38YLR360W MTC3P53077 123 aa5.15□□□□□ -1.59
VPS38YLR360W CDA2Q06703 312 aa5.15□□□□□ -1.59
VPS38YLR360W SPO75Q07798 868 aa5.15□□□□□ -1.59
VPS38YLR360W MDM38Q08179 573 aa5.15□□□□□ -1.59
VPS38YLR360W RIB2Q12362 591 aaKnown RBP5.15□□□□□ -1.59
VPS38YLR360W RAD4P14736 754 aa5.14□□□□□ -1.59
VPS38YLR360W AAR2P32357 355 aaPredicted RBP5.14□□□□□ -1.59
VPS38YLR360W RPS13P05756 151 aaKnown RBP5.13□□□□□ -1.59
VPS38YLR360W PRP9P19736 530 aaKnown RBP5.13□□□□□ -1.59
VPS38YLR360W SRM1P21827 482 aa5.13□□□□□ -1.59
VPS38YLR360W LAM1P38851 1228 aa5.13□□□□□ -1.59
VPS38YLR360W TIM54P47045 478 aa5.13□□□□□ -1.59
VPS38YLR360W TPO2P53283 614 aa5.13□□□□□ -1.59
VPS38YLR360W EAF1Q06337 982 aa5.13□□□□□ -1.59
VPS38YLR360W XYL2Q07993 356 aa5.13□□□□□ -1.59
VPS38YLR360W OSH2Q12451 1283 aa5.13□□□□□ -1.59
VPS38YLR360W CDC12P32468 407 aaKnown RBP5.12□□□□□ -1.59
VPS38YLR360W MEF2P39677 819 aa5.12□□□□□ -1.59
VPS38YLR360W UBP5P39944 805 aa5.12□□□□□ -1.59
VPS38YLR360W ALR2P43553 858 aa5.12□□□□□ -1.59
VPS38YLR360W GUS1P46655 708 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
VPS38YLR360W NNF1P47149 201 aa5.12□□□□□ -1.59
VPS38YLR360W GTF1P53260 183 aaPredicted RBP5.12□□□□□ -1.59
VPS38YLR360W SRT1Q03175 343 aa5.12□□□□□ -1.59
VPS38YLR360W MSC2Q03455 724 aa5.12□□□□□ -1.59
VPS38YLR360W PLB2Q03674 706 aa5.12□□□□□ -1.59
VPS38YLR360W FMP25Q08023 583 aa5.12□□□□□ -1.59
VPS38YLR360W YPL277CQ08989 487 aa5.12□□□□□ -1.59
VPS38YLR360W YLL058WQ12198 575 aa5.12□□□□□ -1.59
VPS38YLR360W ADE8P04161 214 aa5.11□□□□□ -1.59
VPS38YLR360W ENA1P13587 1091 aa5.11□□□□□ -1.59
VPS38YLR360W ARE1P25628 610 aa5.11□□□□□ -1.59
VPS38YLR360W RPL8BP29453 256 aaKnown RBP5.11□□□□□ -1.59
VPS38YLR360W YRO2P38079 344 aa5.11□□□□□ -1.59
VPS38YLR360W TAT2P38967 592 aa5.11□□□□□ -1.59
VPS38YLR360W PFD1P46988 109 aa5.11□□□□□ -1.59
VPS38YLR360W YJL049WP47048 450 aa5.11□□□□□ -1.59
VPS38YLR360W SPT20P50875 604 aa5.11□□□□□ -1.59
VPS38YLR360W ENA2Q01896 1091 aa5.11□□□□□ -1.59
VPS38YLR360W SIZ1Q04195 904 aa5.11□□□□□ -1.59
VPS38YLR360W YPR196WQ06595 470 aa5.11□□□□□ -1.59
VPS38YLR360W UBX5Q06682 500 aa5.11□□□□□ -1.59
VPS38YLR360W ENA5Q12691 1091 aa5.11□□□□□ -1.59
VPS38YLR360W PRP6P19735 899 aaPredicted RBP5.1□□□□□ -1.59
VPS38YLR360W TOD6P34219 525 aa5.1□□□□□ -1.59
VPS38YLR360W GIC1P38785 314 aa5.1□□□□□ -1.59
VPS38YLR360W ZRG8P40021 1076 aa5.1□□□□□ -1.59
VPS38YLR360W RIM8P53179 542 aa5.1□□□□□ -1.59
VPS38YLR360W PBP1P53297 722 aaKnown RBP5.1□□□□□ -1.59
VPS38YLR360W SOD2P00447 233 aa5.09□□□□□ -1.59
VPS38YLR360W FUN30P31380 1131 aa5.09□□□□□ -1.59
VPS38YLR360W YBR284WP38150 797 aa5.09□□□□□ -1.59
VPS38YLR360W YAP1801P38856 637 aa5.09□□□□□ -1.59
VPS38YLR360W CCC2P38995 1004 aa5.09□□□□□ -1.59
VPS38YLR360W GCV2P49095 1034 aa5.09□□□□□ -1.59
VPS38YLR360W ERP6P53198 216 aa5.09□□□□□ -1.59
VPS38YLR360W YGR125WP53273 1036 aa5.09□□□□□ -1.59
VPS38YLR360W SFB2P53953 876 aa5.09□□□□□ -1.59
VPS38YLR360W GCN5Q03330 439 aa5.09□□□□□ -1.59
VPS38YLR360W HSP60P19882 572 aaKnown RBP5.08□□□□□ -1.6
VPS38YLR360W CDC11P32458 415 aa5.08□□□□□ -1.6
VPS38YLR360W HUL5P53119 910 aa5.08□□□□□ -1.6
VPS38YLR360W UTP8P53276 713 aaKnown RBP5.08□□□□□ -1.6
VPS38YLR360W GPB1Q08886 897 aa5.08□□□□□ -1.6
VPS38YLR360W HBS1P32769 611 aaKnown RBP5.07□□□□□ -1.6
VPS38YLR360W SRP101P32916 621 aa5.07□□□□□ -1.6
VPS38YLR360W ECM21P38167 1117 aaKnown RBP5.07□□□□□ -1.6
VPS38YLR360W NPP2P39997 493 aa5.07□□□□□ -1.6
VPS38YLR360W GYP7P48365 746 aa5.07□□□□□ -1.6
VPS38YLR360W RXT3Q07458 294 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 136.8 ms