RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A SPT20P50875 604 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A HRQ1Q05549 1077 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A DFG16Q99234 619 aa2.26□□□□□ -2.05
YLR035C-AYLR035C-A RPL11AP0C0W9 174 aaKnown RBP2.25□□□□□ -2.05
YLR035C-AYLR035C-A SRP101P32916 621 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A RSC58Q07979 502 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A LPX1Q12405 387 aaKnown RBP2.25□□□□□ -2.05
YLR035C-AYLR035C-A RPL11BQ3E757 174 aaPredicted RBP2.25□□□□□ -2.05
YLR035C-AYLR035C-A DBP5P20449 482 aaKnown RBP2.25□□□□□ -2.05
YLR035C-AYLR035C-A CEP3P40969 608 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A VPS53P47061 822 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A YGR125WP53273 1036 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A TNA1P53322 534 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A ENT2Q05785 613 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A TOP3P13099 656 aa2.25□□□□□ -2.05
YLR035C-AYLR035C-A YKL091CP33324 310 aaKnown RBP2.25□□□□□ -2.05
YLR035C-AYLR035C-A NBA1Q08229 501 aaKnown RBP2.25□□□□□ -2.05
YLR035C-AYLR035C-A PUB1P32588 453 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
YLR035C-AYLR035C-A ABZ1P37254 787 aaPredicted RBP2.24□□□□□ -2.05
YLR035C-AYLR035C-A WHI4Q07655 649 aaKnown RBP2.24□□□□□ -2.05
YLR035C-AYLR035C-A GAL10P04397 699 aa2.24□□□□□ -2.05
YLR035C-AYLR035C-A YEF3P16521 1044 aaKnown RBP2.24□□□□□ -2.05
YLR035C-AYLR035C-A INH1P01097 85 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A TOP1P04786 769 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A TOD6P34219 525 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A MPH1P40562 993 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A EAF1Q06337 982 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A PIN2Q12057 282 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A NYV1Q12255 253 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A NPP2P39997 493 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A YFR016CP43597 1233 aaKnown RBP2.23□□□□□ -2.05
YLR035C-AYLR035C-A MDG1P53885 366 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A RPD3P32561 433 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A TFC3P34111 1160 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A RFC5P38251 354 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A CCZ1P38273 704 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A NUG1P40010 520 aaKnown RBP2.23□□□□□ -2.05
YLR035C-AYLR035C-A PLB2Q03674 706 aa2.23□□□□□ -2.05
YLR035C-AYLR035C-A TMA46Q12000 345 aaKnown RBP2.23□□□□□ -2.05
YLR035C-AYLR035C-A RPO21P04050 1733 aaKnown RBP2.23□□□□□ -2.05
YLR035C-AYLR035C-A RSM24Q03976 319 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A RGD1P38339 666 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A HFM1P51979 1187 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A MRPL22P53881 309 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A SSF2Q12153 453 aaPredicted RBP2.22□□□□□ -2.05
YLR035C-AYLR035C-A TCB3Q03640 1545 aaKnown RBP2.22□□□□□ -2.05
YLR035C-AYLR035C-A ERR1P0CX10 437 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A ERR2P0CX11 437 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A MSM1P22438 575 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A NPP1P25353 742 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A PER1P25625 357 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A HNT2P49775 206 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A YMR111CQ04461 462 aaPredicted RBP2.22□□□□□ -2.05
YLR035C-AYLR035C-A TMA10Q06177 86 aa2.22□□□□□ -2.05
YLR035C-AYLR035C-A CAD1P24813 409 aaKnown RBP2.21□□□□□ -2.06
YLR035C-AYLR035C-A DEF1P35732 738 aaKnown RBP2.21□□□□□ -2.06
YLR035C-AYLR035C-A FPR3P38911 411 aaKnown RBP2.21□□□□□ -2.06
YLR035C-AYLR035C-A YMR206WQ03695 313 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A YPL277CQ08989 487 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A OSW2Q12202 724 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A OSH2Q12451 1283 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A SNF5P18480 905 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A ZRG8P40021 1076 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A YOR131CQ12486 218 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A QCR6P00127 147 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A MDL2P33311 773 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A YKL151CP36059 337 aa2.21□□□□□ -2.06
YLR035C-AYLR035C-A SSL1Q04673 461 aaPredicted RBP2.21□□□□□ -2.06
YLR035C-AYLR035C-A RPA135P22138 1203 aaKnown RBP2.2□□□□□ -2.06
YLR035C-AYLR035C-A SAP190P36123 1033 aa2.2□□□□□ -2.06
YLR035C-AYLR035C-A ARL1P38116 183 aaKnown RBP2.2□□□□□ -2.06
YLR035C-AYLR035C-A SPF1P39986 1215 aaKnown RBP2.2□□□□□ -2.06
YLR035C-AYLR035C-A YPL260WQ08977 551 aa2.2□□□□□ -2.06
YLR035C-AYLR035C-A GNT1Q12096 491 aa2.2□□□□□ -2.06
YLR035C-AYLR035C-A PHR1P05066 565 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
YLR035C-AYLR035C-A TOM70P07213 617 aaKnown RBP2.2□□□□□ -2.06
YLR035C-AYLR035C-A TIM23P32897 222 aa2.2□□□□□ -2.06
YLR035C-AYLR035C-A RRP14P36080 434 aaKnown RBP2.2□□□□□ -2.06
YLR035C-AYLR035C-A TYS1P36421 394 aaKnown RBP2.2□□□□□ -2.06
YLR035C-AYLR035C-A PNT1P38969 423 aa2.2□□□□□ -2.06
YLR035C-AYLR035C-A YAP6Q03935 383 aa2.2□□□□□ -2.06
YLR035C-AYLR035C-A RPS13P05756 151 aaKnown RBP2.19□□□□□ -2.06
YLR035C-AYLR035C-A SRM1P21827 482 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A EMC1P25574 760 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A TIF5P38431 405 aaKnown RBP2.19□□□□□ -2.06
YLR035C-AYLR035C-A ENT1Q12518 454 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A RIX1P38883 763 aaPredicted RBP2.19□□□□□ -2.06
YLR035C-AYLR035C-A ERP2P39704 215 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A KRI1P42846 591 aaKnown RBP2.19□□□□□ -2.06
YLR035C-AYLR035C-A IOC3P43596 787 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A YGR053CP53234 283 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A HSP82P02829 709 aaKnown RBP2.19□□□□□ -2.06
YLR035C-AYLR035C-A MNR2P35724 969 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A YKL222CP35995 705 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A YAP1801P38856 637 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A YOR059CQ08448 450 aaKnown RBP2.19□□□□□ -2.06
YLR035C-AYLR035C-A INO80P53115 1489 aa2.19□□□□□ -2.06
YLR035C-AYLR035C-A MSD1P15179 658 aaKnown RBP2.18□□□□□ -2.06
YLR035C-AYLR035C-A RFA1P22336 621 aaKnown RBP2.18□□□□□ -2.06
YLR035C-AYLR035C-A SLA2P33338 968 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 184 ms