RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	CCT5	P40413	562 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	VPS53	P47061	822 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	PEX14	P53112	341 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	SEC5	P89102	971 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	THI22	Q06490	572 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	TSR1	Q07381	788 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	HIS3	P06633	220 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	KCC4	P25389	1037 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	PPG1	P32838	368 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	ECM4	P36156	370 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	TAF5	P38129	798 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	SYG1	P40528	902 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	GCD10	P41814	478 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	MAL13	P53338	473 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	ESBP6	P53918	673 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	TAF8	Q03750	510 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	EIS1	Q05050	843 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	SDH5	Q08230	162 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	NOB1	Q08444	459 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	NOT5	Q12514	560 aa	Predicted RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	ADE6	P38972	1358 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	PET122	P10355	254 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	PMA2	P19657	947 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	PGS1	P25578	521 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	YKR018C	P36114	725 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	CCL1	P37366	393 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	YRO2	P38079	344 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	RIM11	P38615	370 aa		4.23	□□□□□ -1.73
SPT23	YKL020C	LIN1	P38852	340 aa	Predicted RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	CCT4	P39078	528 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	YHB1	P39676	399 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	GCN20	P43535	752 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	ADE13	Q05911	482 aa	Known RBP	4.23	□□□□□ -1.73
SPT23	YKL020C	RPB2	P08518	1224 aa	Known RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	RPO26	P20435	155 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	ACE2	P21192	770 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	DPB3	P27344	201 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	MGM1	P32266	881 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	VPH1	P32563	840 aa	Known RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	RPN2	P32565	945 aa	Known RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	BUD2	P33314	1104 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	TRZ1	P36159	838 aa	Predicted RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	YBR242W	P38331	238 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	NUP60	P39705	539 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	ACF4	P47129	309 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	YNL144C	P53907	740 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	MFM1	Q02783	413 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	KAR5	Q04746	504 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	MMR1	Q06324	491 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	ACF2	Q12168	779 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	THS1	P04801	734 aa	Known RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	SUI3	P09064	285 aa	Known RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	KIP2	P28743	706 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	BMH1	P29311	267 aa	Known RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	YEL043W	P32618	956 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	SSO1	P32867	290 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	RSM22	P36056	628 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	APE4	P38821	490 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	STM1	P39015	273 aa	Known RBP	4.22	□□□□□ -1.73
SPT23	YKL020C	MNT3	P40549	630 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	YJR079W	P47126	109 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	ALT1	P52893	592 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	SHE10	P53075	577 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	PLP1	Q04004	230 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	YKU80	Q04437	629 aa		4.22	□□□□□ -1.73
SPT23	YKL020C	SPS1	P08458	490 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	SPE2	P21182	396 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	IME1	P21190	360 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	UBC1	P21734	215 aa	Known RBP	4.21	□□□□□ -1.73
SPT23	YKL020C	SSE1	P32589	693 aa	Known RBP	4.21	□□□□□ -1.73
SPT23	YKL020C	CDC27	P38042	758 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	IFA38	P38286	347 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	PIH1	P38768	344 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	CAJ1	P39101	391 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	RTR1	P40084	226 aa	Predicted RBP	4.21	□□□□□ -1.73
SPT23	YKL020C	VTC2	P43585	828 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	URB2	P47108	1174 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	NNF1	P47149	201 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	SSN8	P47821	323 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	YGR016W	P53209	190 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	HXT17	P53631	564 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	BET4	Q00618	327 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	OPY2	Q06810	360 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	BDF2	Q07442	638 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	YOR289W	Q12012	251 aa	Predicted RBP	4.21	□□□□□ -1.73
SPT23	YKL020C	TFC8	Q12308	588 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	OSH2	Q12451	1283 aa		4.21	□□□□□ -1.73
SPT23	YKL020C	GCD2	P12754	651 aa	Predicted RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	RAD5	P32849	1169 aa	Predicted RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	YHL012W	P38709	493 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	ATG3	P40344	310 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	HUL4	P40985	892 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	ATP22	P50273	684 aa	Predicted RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	DML1	Q03652	475 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	RBA50	Q04418	439 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	POB3	Q04636	552 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	YLR177W	Q06251	628 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	MAG2	Q06436	670 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	YLH47	Q06493	454 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	MLH2	Q07980	695 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms