RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C MTC3P53077 123 aa5.51□□□□□ -1.53
RTA1YGR213C ENV11P53246 860 aa5.51□□□□□ -1.53
RTA1YGR213C HRQ1Q05549 1077 aa5.51□□□□□ -1.53
RTA1YGR213C YLL058WQ12198 575 aa5.51□□□□□ -1.53
RTA1YGR213C SVS1Q12254 260 aa5.51□□□□□ -1.53
RTA1YGR213C DFG16Q99234 619 aa5.51□□□□□ -1.53
RTA1YGR213C ACE2P21192 770 aa5.5□□□□□ -1.53
RTA1YGR213C LRG1P35688 1017 aa5.5□□□□□ -1.53
RTA1YGR213C POL12P38121 705 aaPredicted RBP5.5□□□□□ -1.53
RTA1YGR213C UTP8P53276 713 aaKnown RBP5.5□□□□□ -1.53
RTA1YGR213C NSE3Q05541 303 aa5.5□□□□□ -1.53
RTA1YGR213C BDF2Q07442 638 aa5.5□□□□□ -1.53
RTA1YGR213C SPO75Q07798 868 aa5.5□□□□□ -1.53
RTA1YGR213C STI1P15705 589 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
RTA1YGR213C PRP9P19736 530 aaKnown RBP5.49□□□□□ -1.53
RTA1YGR213C CDC12P32468 407 aaKnown RBP5.49□□□□□ -1.53
RTA1YGR213C RFC5P38251 354 aa5.49□□□□□ -1.53
RTA1YGR213C HUL5P53119 910 aa5.49□□□□□ -1.53
RTA1YGR213C DUS3Q06053 668 aaKnown RBP5.49□□□□□ -1.53
RTA1YGR213C YHR020WP38708 688 aaKnown RBP5.48□□□□□ -1.53
RTA1YGR213C TIM54P47045 478 aa5.48□□□□□ -1.53
RTA1YGR213C ECL1P48235 211 aa5.48□□□□□ -1.53
RTA1YGR213C ERP6P53198 216 aa5.48□□□□□ -1.53
RTA1YGR213C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
RTA1YGR213C SRP1Q02821 542 aaKnown RBP5.48□□□□□ -1.53
RTA1YGR213C YDR306CQ06640 478 aa5.48□□□□□ -1.53
RTA1YGR213C MDM38Q08179 573 aa5.48□□□□□ -1.53
RTA1YGR213C YDL177CQ12257 170 aa5.48□□□□□ -1.53
RTA1YGR213C OSH2Q12451 1283 aa5.48□□□□□ -1.53
RTA1YGR213C HBS1P32769 611 aaKnown RBP5.47□□□□□ -1.53
RTA1YGR213C ETP1P38748 585 aaKnown RBP5.47□□□□□ -1.53
RTA1YGR213C SAH1P39954 449 aaKnown RBP5.47□□□□□ -1.53
RTA1YGR213C ALR2P43553 858 aa5.47□□□□□ -1.53
RTA1YGR213C HFM1P51979 1187 aa5.47□□□□□ -1.53
RTA1YGR213C EAF1Q06337 982 aa5.47□□□□□ -1.53
RTA1YGR213C CDC53Q12018 815 aaKnown RBP5.47□□□□□ -1.53
RTA1YGR213C RIB2Q12362 591 aaKnown RBP5.47□□□□□ -1.53
RTA1YGR213C SIT1P39980 628 aa5.46□□□□□ -1.54
RTA1YGR213C RSM24Q03976 319 aa5.46□□□□□ -1.54
RTA1YGR213C SIZ1Q04195 904 aa5.46□□□□□ -1.54
RTA1YGR213C FLC1Q08967 793 aa5.46□□□□□ -1.54
RTA1YGR213C YTA7P40340 1379 aa5.45□□□□□ -1.54
RTA1YGR213C KIN2P13186 1147 aaKnown RBP5.45□□□□□ -1.54
RTA1YGR213C HSP60P19882 572 aaKnown RBP5.45□□□□□ -1.54
RTA1YGR213C APL1P27351 700 aa5.45□□□□□ -1.54
RTA1YGR213C SRP40P32583 406 aaPredicted RBP5.45□□□□□ -1.54
RTA1YGR213C CAB3P36076 571 aa5.45□□□□□ -1.54
RTA1YGR213C GIC1P38785 314 aa5.45□□□□□ -1.54
RTA1YGR213C YGR125WP53273 1036 aa5.45□□□□□ -1.54
RTA1YGR213C TPO2P53283 614 aa5.45□□□□□ -1.54
RTA1YGR213C NRD1P53617 575 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
RTA1YGR213C SRT1Q03175 343 aa5.45□□□□□ -1.54
RTA1YGR213C UBX5Q06682 500 aa5.45□□□□□ -1.54
RTA1YGR213C CIT1P00890 479 aa5.44□□□□□ -1.54
RTA1YGR213C ARE1P25628 610 aa5.44□□□□□ -1.54
RTA1YGR213C FUN30P31380 1131 aa5.44□□□□□ -1.54
RTA1YGR213C PPH3P32345 308 aa5.44□□□□□ -1.54
RTA1YGR213C AAR2P32357 355 aaPredicted RBP5.44□□□□□ -1.54
RTA1YGR213C AFR1P33304 620 aa5.44□□□□□ -1.54
RTA1YGR213C SEG2P34250 1132 aa5.44□□□□□ -1.54
RTA1YGR213C NPP2P39997 493 aa5.44□□□□□ -1.54
RTA1YGR213C GYP7P48365 746 aa5.44□□□□□ -1.54
RTA1YGR213C RPN4Q03465 531 aa5.44□□□□□ -1.54
RTA1YGR213C CYC1P00044 109 aaPredicted RBP5.43□□□□□ -1.54
RTA1YGR213C SRM1P21827 482 aa5.43□□□□□ -1.54
RTA1YGR213C TSA1P34760 196 aaKnown RBP5.43□□□□□ -1.54
RTA1YGR213C YAP1801P38856 637 aa5.43□□□□□ -1.54
RTA1YGR213C CCC2P38995 1004 aa5.43□□□□□ -1.54
RTA1YGR213C RSP5P39940 809 aaKnown RBP5.43□□□□□ -1.54
RTA1YGR213C SNO2P53823 222 aa5.43□□□□□ -1.54
RTA1YGR213C MSC2Q03455 724 aa5.43□□□□□ -1.54
RTA1YGR213C BUL2Q03758 920 aaKnown RBP5.43□□□□□ -1.54
RTA1YGR213C XYL2Q07993 356 aa5.43□□□□□ -1.54
RTA1YGR213C PPM2Q08282 695 aa5.43□□□□□ -1.54
RTA1YGR213C OSW2Q12202 724 aa5.43□□□□□ -1.54
RTA1YGR213C ADE8P04161 214 aa5.42□□□□□ -1.54
RTA1YGR213C CMP2P14747 604 aa5.42□□□□□ -1.54
RTA1YGR213C NPP1P25353 742 aa5.42□□□□□ -1.54
RTA1YGR213C CDC11P32458 415 aa5.42□□□□□ -1.54
RTA1YGR213C SCT1P32784 759 aa5.42□□□□□ -1.54
RTA1YGR213C YKR078WP36158 585 aaKnown RBP5.42□□□□□ -1.54
RTA1YGR213C TSL1P38427 1098 aaKnown RBP5.42□□□□□ -1.54
RTA1YGR213C MRPL22P53881 309 aa5.42□□□□□ -1.54
RTA1YGR213C ORC1P54784 914 aaPredicted RBP5.42□□□□□ -1.54
RTA1YGR213C TAF8Q03750 510 aa5.42□□□□□ -1.54
RTA1YGR213C YOR131CQ12486 218 aa5.42□□□□□ -1.54
RTA1YGR213C HBN1Q96VH4 193 aa5.42□□□□□ -1.54
RTA1YGR213C YKL091CP33324 310 aaKnown RBP5.41□□□□□ -1.54
RTA1YGR213C YRO2P38079 344 aa5.41□□□□□ -1.54
RTA1YGR213C GGA2P38817 585 aaKnown RBP5.41□□□□□ -1.54
RTA1YGR213C BUD6P41697 788 aa5.41□□□□□ -1.54
RTA1YGR213C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
RTA1YGR213C SGD1Q06132 899 aa5.41□□□□□ -1.54
RTA1YGR213C CDA2Q06703 312 aa5.41□□□□□ -1.54
RTA1YGR213C GAL10P04397 699 aa5.4□□□□□ -1.54
RTA1YGR213C CAN1P04817 590 aa5.4□□□□□ -1.54
RTA1YGR213C RPC82P32349 654 aa5.4□□□□□ -1.54
RTA1YGR213C ELM1P32801 640 aa5.4□□□□□ -1.54
RTA1YGR213C EBP2P36049 427 aaKnown RBP5.4□□□□□ -1.54
RTA1YGR213C ECM21P38167 1117 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms