RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W GPB2P39717 880 aa4.42□□□□□ -1.7
SLD5YDR489W IRR1P40541 1150 aa4.42□□□□□ -1.7
SLD5YDR489W GTS1P40956 396 aa4.42□□□□□ -1.7
SLD5YDR489W TPP1Q03796 238 aa4.42□□□□□ -1.7
SLD5YDR489W TAD3Q9URQ3 322 aa4.42□□□□□ -1.7
SLD5YDR489W CIT2P08679 460 aa4.41□□□□□ -1.7
SLD5YDR489W SAM35P14693 329 aa4.41□□□□□ -1.7
SLD5YDR489W DBP2P24783 546 aaKnown RBP4.41□□□□□ -1.7
SLD5YDR489W ABZ1P37254 787 aaPredicted RBP4.41□□□□□ -1.7
SLD5YDR489W PBP2P38151 413 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SLD5YDR489W MBP1P39678 833 aa4.41□□□□□ -1.7
SLD5YDR489W GUS1P46655 708 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SLD5YDR489W YPL277CQ08989 487 aa4.41□□□□□ -1.7
SLD5YDR489W CDC53Q12018 815 aaKnown RBP4.41□□□□□ -1.7
SLD5YDR489W RPL11AP0C0W9 174 aaKnown RBP4.4□□□□□ -1.71
SLD5YDR489W SRP40P32583 406 aaPredicted RBP4.4□□□□□ -1.71
SLD5YDR489W YSC84P32793 468 aa4.4□□□□□ -1.71
SLD5YDR489W SLA2P33338 968 aa4.4□□□□□ -1.71
SLD5YDR489W ETP1P38748 585 aaKnown RBP4.4□□□□□ -1.71
SLD5YDR489W YFL054CP43549 646 aa4.4□□□□□ -1.71
SLD5YDR489W TIM54P47045 478 aa4.4□□□□□ -1.71
SLD5YDR489W UTP8P53276 713 aaKnown RBP4.4□□□□□ -1.71
SLD5YDR489W RPL11BQ3E757 174 aaPredicted RBP4.4□□□□□ -1.71
SLD5YDR489W HBS1P32769 611 aaKnown RBP4.39□□□□□ -1.71
SLD5YDR489W YKL091CP33324 310 aaKnown RBP4.39□□□□□ -1.71
SLD5YDR489W TNA1P53322 534 aa4.39□□□□□ -1.71
SLD5YDR489W RCL1Q08096 367 aaPredicted RBP4.39□□□□□ -1.71
SLD5YDR489W FLC1Q08967 793 aa4.39□□□□□ -1.71
SLD5YDR489W CIT1P00890 479 aa4.38□□□□□ -1.71
SLD5YDR489W RPS13P05756 151 aaKnown RBP4.38□□□□□ -1.71
SLD5YDR489W YKL151CP36059 337 aa4.38□□□□□ -1.71
SLD5YDR489W SNF7P39929 240 aaKnown RBP4.38□□□□□ -1.71
SLD5YDR489W MXR1P40029 184 aa4.38□□□□□ -1.71
SLD5YDR489W HOS3Q02959 697 aaKnown RBP4.38□□□□□ -1.71
SLD5YDR489W TAF8Q03750 510 aa4.38□□□□□ -1.71
SLD5YDR489W SPP382Q06411 708 aaPredicted RBP4.38□□□□□ -1.71
SLD5YDR489W TUB2P02557 457 aaKnown RBP4.37□□□□□ -1.71
SLD5YDR489W SRO9P25567 434 aaKnown RBP4.37□□□□□ -1.71
SLD5YDR489W CDC12P32468 407 aaKnown RBP4.37□□□□□ -1.71
SLD5YDR489W SHM2P37291 469 aaKnown RBP4.37□□□□□ -1.71
SLD5YDR489W YHL012WP38709 493 aa4.37□□□□□ -1.71
SLD5YDR489W PIK1P39104 1066 aa4.37□□□□□ -1.71
SLD5YDR489W RSP5P39940 809 aaKnown RBP4.37□□□□□ -1.71
SLD5YDR489W ERP6P53198 216 aa4.37□□□□□ -1.71
SLD5YDR489W CLU1Q03690 1277 aaKnown RBP4.37□□□□□ -1.71
SLD5YDR489W SPO75Q07798 868 aa4.37□□□□□ -1.71
SLD5YDR489W ACM1Q08981 209 aa4.37□□□□□ -1.71
SLD5YDR489W AIM44Q99299 758 aa4.37□□□□□ -1.71
SLD5YDR489W COQ4O13525 335 aa4.36□□□□□ -1.71
SLD5YDR489W PRP9P19736 530 aaKnown RBP4.36□□□□□ -1.71
SLD5YDR489W HSP60P19882 572 aaKnown RBP4.36□□□□□ -1.71
SLD5YDR489W AFR1P33304 620 aa4.36□□□□□ -1.71
SLD5YDR489W NMD2P38798 1089 aaKnown RBP4.36□□□□□ -1.71
SLD5YDR489W SIT1P39980 628 aa4.36□□□□□ -1.71
SLD5YDR489W RTA1P53047 317 aa4.36□□□□□ -1.71
SLD5YDR489W BUL2Q03758 920 aaKnown RBP4.36□□□□□ -1.71
SLD5YDR489W HRQ1Q05549 1077 aa4.36□□□□□ -1.71
SLD5YDR489W PNS1Q12412 539 aa4.36□□□□□ -1.71
SLD5YDR489W OSH2Q12451 1283 aa4.36□□□□□ -1.71
SLD5YDR489W YLR358CO13565 187 aa4.35□□□□□ -1.71
SLD5YDR489W CAN1P04817 590 aa4.35□□□□□ -1.71
SLD5YDR489W TIM23P32897 222 aa4.35□□□□□ -1.71
SLD5YDR489W MDL2P33311 773 aa4.35□□□□□ -1.71
SLD5YDR489W RRP14P36080 434 aaKnown RBP4.35□□□□□ -1.71
SLD5YDR489W GEM1P39722 662 aa4.35□□□□□ -1.71
SLD5YDR489W ALR2P43553 858 aa4.35□□□□□ -1.71
SLD5YDR489W MTC3P53077 123 aa4.35□□□□□ -1.71
SLD5YDR489W YGR125WP53273 1036 aa4.35□□□□□ -1.71
SLD5YDR489W SNO2P53823 222 aa4.35□□□□□ -1.71
SLD5YDR489W DOS2P54858 310 aa4.35□□□□□ -1.71
SLD5YDR489W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SLD5YDR489W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SLD5YDR489W ATG13Q06628 738 aa4.35□□□□□ -1.71
SLD5YDR489W UBX5Q06682 500 aa4.35□□□□□ -1.71
SLD5YDR489W YOR131CQ12486 218 aa4.35□□□□□ -1.71
SLD5YDR489W GAL11P19659 1081 aa4.34□□□□□ -1.71
SLD5YDR489W BET3P36149 193 aa4.34□□□□□ -1.71
SLD5YDR489W UGA2P38067 497 aa4.34□□□□□ -1.71
SLD5YDR489W GGA2P38817 585 aaKnown RBP4.34□□□□□ -1.71
SLD5YDR489W CHZ1P40019 153 aaPredicted RBP4.34□□□□□ -1.71
SLD5YDR489W RNH70P53331 553 aa4.34□□□□□ -1.71
SLD5YDR489W ALG12P53730 551 aa4.34□□□□□ -1.71
SLD5YDR489W EAF1Q06337 982 aa4.34□□□□□ -1.71
SLD5YDR489W RSC58Q07979 502 aa4.34□□□□□ -1.71
SLD5YDR489W YLL058WQ12198 575 aa4.34□□□□□ -1.71
SLD5YDR489W HBN1Q96VH4 193 aa4.34□□□□□ -1.71
SLD5YDR489W BI4P03879 638 aa4.33□□□□□ -1.72
SLD5YDR489W ERR1P0CX10 437 aa4.33□□□□□ -1.72
SLD5YDR489W ERR2P0CX11 437 aa4.33□□□□□ -1.72
SLD5YDR489W CTS1P29029 562 aa4.33□□□□□ -1.72
SLD5YDR489W AIM26P32858 118 aa4.33□□□□□ -1.72
SLD5YDR489W YPT53P36019 220 aa4.33□□□□□ -1.72
SLD5YDR489W CCZ1P38273 704 aa4.33□□□□□ -1.72
SLD5YDR489W NPP2P39997 493 aa4.33□□□□□ -1.72
SLD5YDR489W NUP82P40368 713 aa4.33□□□□□ -1.72
SLD5YDR489W OSW7P43611 510 aa4.33□□□□□ -1.72
SLD5YDR489W FOL2P51601 243 aaKnown RBP4.33□□□□□ -1.72
SLD5YDR489W PRE10P21242 288 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SLD5YDR489W ARE1P25628 610 aa4.32□□□□□ -1.72
SLD5YDR489W YBR238CP38330 731 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms