RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C GTS1P40956 396 aa2.6□□□□□ -1.99
SWI5YDR146C BUD6P41697 788 aa2.6□□□□□ -1.99
SWI5YDR146C UTP8P53276 713 aaKnown RBP2.6□□□□□ -1.99
SWI5YDR146C RPN4Q03465 531 aa2.6□□□□□ -1.99
SWI5YDR146C YLL058WQ12198 575 aa2.6□□□□□ -1.99
SWI5YDR146C STI1P15705 589 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SWI5YDR146C HSP78P33416 811 aa2.6□□□□□ -1.99
SWI5YDR146C NPP2P39997 493 aa2.6□□□□□ -1.99
SWI5YDR146C HUL5P53119 910 aa2.6□□□□□ -1.99
SWI5YDR146C NSI1Q12457 570 aa2.6□□□□□ -1.99
SWI5YDR146C PRP9P19736 530 aaKnown RBP2.59□□□□□ -1.99
SWI5YDR146C RRT14P40470 206 aa2.59□□□□□ -1.99
SWI5YDR146C TAF8Q03750 510 aa2.59□□□□□ -1.99
SWI5YDR146C SIZ1Q04195 904 aa2.59□□□□□ -1.99
SWI5YDR146C NBA1Q08229 501 aaKnown RBP2.59□□□□□ -1.99
SWI5YDR146C YDL177CQ12257 170 aa2.59□□□□□ -1.99
SWI5YDR146C AIM26P32858 118 aa2.59□□□□□ -2
SWI5YDR146C OMA1P36163 345 aa2.59□□□□□ -2
SWI5YDR146C GIC1P38785 314 aa2.59□□□□□ -2
SWI5YDR146C SEC26P41810 973 aaKnown RBP2.59□□□□□ -2
SWI5YDR146C TIM54P47045 478 aa2.59□□□□□ -2
SWI5YDR146C ERP6P53198 216 aa2.59□□□□□ -2
SWI5YDR146C MDM38Q08179 573 aa2.59□□□□□ -2
SWI5YDR146C FLC1Q08967 793 aa2.59□□□□□ -2
SWI5YDR146C THS1P04801 734 aaKnown RBP2.58□□□□□ -2
SWI5YDR146C SPS1P08458 490 aa2.58□□□□□ -2
SWI5YDR146C SRM1P21827 482 aa2.58□□□□□ -2
SWI5YDR146C NPP1P25353 742 aa2.58□□□□□ -2
SWI5YDR146C TSA1P34760 196 aaKnown RBP2.58□□□□□ -2
SWI5YDR146C LRG1P35688 1017 aa2.58□□□□□ -2
SWI5YDR146C YBR238CP38330 731 aaKnown RBP2.58□□□□□ -2
SWI5YDR146C HFM1P51979 1187 aa2.58□□□□□ -2
SWI5YDR146C YKE2P52553 114 aa2.58□□□□□ -2
SWI5YDR146C XYL2Q07993 356 aa2.58□□□□□ -2
SWI5YDR146C CIT1P00890 479 aa2.57□□□□□ -2
SWI5YDR146C BET3P36149 193 aa2.57□□□□□ -2
SWI5YDR146C PBP2P38151 413 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SWI5YDR146C TSL1P38427 1098 aaKnown RBP2.57□□□□□ -2
SWI5YDR146C RSP5P39940 809 aaKnown RBP2.57□□□□□ -2
SWI5YDR146C ALR2P43553 858 aa2.57□□□□□ -2
SWI5YDR146C RTA1P53047 317 aa2.57□□□□□ -2
SWI5YDR146C ENV11P53246 860 aa2.57□□□□□ -2
SWI5YDR146C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SWI5YDR146C SRT1Q03175 343 aa2.57□□□□□ -2
SWI5YDR146C DUS3Q06053 668 aaKnown RBP2.57□□□□□ -2
SWI5YDR146C FPR4Q06205 392 aaPredicted RBP2.57□□□□□ -2
SWI5YDR146C UBX5Q06682 500 aa2.57□□□□□ -2
SWI5YDR146C SPO75Q07798 868 aa2.57□□□□□ -2
SWI5YDR146C CDC53Q12018 815 aaKnown RBP2.57□□□□□ -2
SWI5YDR146C SVS1Q12254 260 aa2.57□□□□□ -2
SWI5YDR146C CAN1P04817 590 aa2.57□□□□□ -2
SWI5YDR146C CIT2P08679 460 aa2.57□□□□□ -2
SWI5YDR146C HSP60P19882 572 aaKnown RBP2.57□□□□□ -2
SWI5YDR146C FUN30P31380 1131 aa2.57□□□□□ -2
SWI5YDR146C LIP5P32875 414 aa2.57□□□□□ -2
SWI5YDR146C GYP7P48365 746 aa2.57□□□□□ -2
SWI5YDR146C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.57□□□□□ -2 RIP-Chip
SWI5YDR146C MSC2Q03455 724 aa2.57□□□□□ -2
SWI5YDR146C EAF1Q06337 982 aa2.57□□□□□ -2
SWI5YDR146C YDR306CQ06640 478 aa2.57□□□□□ -2
SWI5YDR146C HBN1Q96VH4 193 aa2.57□□□□□ -2
SWI5YDR146C DFG16Q99234 619 aa2.57□□□□□ -2
SWI5YDR146C SRP40P32583 406 aaPredicted RBP2.56□□□□□ -2
SWI5YDR146C YKR078WP36158 585 aaKnown RBP2.56□□□□□ -2
SWI5YDR146C ERT1P38140 529 aa2.56□□□□□ -2
SWI5YDR146C RFC5P38251 354 aa2.56□□□□□ -2
SWI5YDR146C YAP1801P38856 637 aa2.56□□□□□ -2
SWI5YDR146C YGR125WP53273 1036 aa2.56□□□□□ -2
SWI5YDR146C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SWI5YDR146C RSB1Q08417 382 aa2.56□□□□□ -2
SWI5YDR146C TOP3P13099 656 aa2.56□□□□□ -2
SWI5YDR146C MSD1P15179 658 aaKnown RBP2.56□□□□□ -2
SWI5YDR146C YKL091CP33324 310 aaKnown RBP2.56□□□□□ -2
SWI5YDR146C MAC1P35192 417 aa2.56□□□□□ -2
SWI5YDR146C PET10P36139 283 aa2.56□□□□□ -2
SWI5YDR146C POL12P38121 705 aaPredicted RBP2.56□□□□□ -2
SWI5YDR146C ECL1P48235 211 aa2.56□□□□□ -2
SWI5YDR146C MAL11P53048 616 aa2.56□□□□□ -2
SWI5YDR146C SRP1Q02821 542 aaKnown RBP2.56□□□□□ -2
SWI5YDR146C CDA2Q06703 312 aa2.56□□□□□ -2
SWI5YDR146C OSH2Q12451 1283 aa2.56□□□□□ -2
SWI5YDR146C CDC6P09119 513 aa2.55□□□□□ -2
SWI5YDR146C ARE1P25628 610 aa2.55□□□□□ -2
SWI5YDR146C TIM23P32897 222 aa2.55□□□□□ -2
SWI5YDR146C ETP1P38748 585 aaKnown RBP2.55□□□□□ -2
SWI5YDR146C CCC2P38995 1004 aa2.55□□□□□ -2
SWI5YDR146C SAH1P39954 449 aaKnown RBP2.55□□□□□ -2
SWI5YDR146C TOK1P40310 691 aa2.55□□□□□ -2
SWI5YDR146C YDR132CQ03900 495 aa2.55□□□□□ -2
SWI5YDR146C LCD1Q04377 747 aa2.55□□□□□ -2
SWI5YDR146C ERR1P0CX10 437 aa2.54□□□□□ -2
SWI5YDR146C ERR2P0CX11 437 aa2.54□□□□□ -2
SWI5YDR146C GAL11P19659 1081 aa2.54□□□□□ -2
SWI5YDR146C RPC82P32349 654 aa2.54□□□□□ -2
SWI5YDR146C SEG2P34250 1132 aa2.54□□□□□ -2
SWI5YDR146C ECM21P38167 1117 aaKnown RBP2.54□□□□□ -2
SWI5YDR146C GGA2P38817 585 aaKnown RBP2.54□□□□□ -2
SWI5YDR146C CHZ1P40019 153 aaPredicted RBP2.54□□□□□ -2
SWI5YDR146C UBP6P43593 499 aaKnown RBP2.54□□□□□ -2
SWI5YDR146C SFB2P53953 876 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms