RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	SUB2	Q07478	446 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	MLH2	Q07980	695 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	RRP6	Q12149	733 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	MET5	P47169	1442 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	IQG1	Q12280	1495 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	ARG81	P05085	880 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	MPH2	P0CD99	609 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	PGI1	P12709	554 aa	Known RBP	4.66	□□□□□ -1.66
SSB1	YDL229W	RSR1	P13856	272 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	GRX4	P32642	244 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	SLX5	P32828	619 aa	Known RBP	4.66	□□□□□ -1.66
SSB1	YDL229W	HSP78	P33416	811 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	PEX6	P33760	1030 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	GRX7	P38068	203 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	YIL055C	P40523	627 aa	Known RBP	4.66	□□□□□ -1.66
SSB1	YDL229W	MIG2	P53035	382 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	SHE10	P53075	577 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	MPS2	P53159	387 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	SPO1	P53541	631 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	YNL144C	P53907	740 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	SEC5	P89102	971 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	HAS1	Q03532	505 aa	Known RBP	4.66	□□□□□ -1.66
SSB1	YDL229W	TAF12	Q03761	539 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	ADE13	Q05911	482 aa	Known RBP	4.66	□□□□□ -1.66
SSB1	YDL229W	MED4	Q12343	284 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	YOL098C	Q12496	1037 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	ULS1	Q08562	1619 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	SSM4	P40318	1319 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	SNT2	P53127	1403 aa		4.66	□□□□□ -1.66
SSB1	YDL229W	GAL1	P04385	528 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	KIN1	P13185	1064 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	ACE2	P21192	770 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	RPC19	P28000	142 aa	Known RBP	4.65	□□□□□ -1.66
SSB1	YDL229W	URA1	P28272	314 aa	Predicted RBP	4.65	□□□□□ -1.66
SSB1	YDL229W	VPS51	P36116	164 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	YSW1	P38280	609 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	IFA38	P38286	347 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	CTM1	P38818	585 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	CAJ1	P39101	391 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	GEM1	P39722	662 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	ATG32	P40458	529 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	STB1	P42845	420 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	ALT1	P52893	592 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	PEX14	P53112	341 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	MDR1	P53258	950 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
SSB1	YDL229W	CWC15	Q03772	175 aa	Known RBP	4.65	□□□□□ -1.66
SSB1	YDL229W	YOR296W	Q08748	1289 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	MHP1	P43638	1398 aa		4.65	□□□□□ -1.66
SSB1	YDL229W	MLP2	P40457	1679 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	RPO21	P04050	1733 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	TRP2	P00899	507 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	CYC8	P14922	966 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	SFL1	P20134	766 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	CLB3	P24870	427 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	ASF2	P32448	525 aa	Predicted RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	VPH1	P32563	840 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	PEP7	P32609	515 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	ATO2	P32907	282 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	RPC34	P32910	317 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	RIB7	P33312	244 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	TEF4	P36008	412 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	MIC60	P36112	540 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	PBY1	P38254	753 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	RIM11	P38615	370 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	CCT3	P39077	534 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	YEL023C	P39992	682 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	EDC3	P39998	551 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	YJR061W	P40355	935 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	VTC2	P43585	828 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	SAP155	P43612	1002 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	HAM1	P47119	197 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	ISM1	P48526	1002 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	RNR4	P49723	345 aa	Known RBP	4.65	□□□□□ -1.67
SSB1	YDL229W	IPI3	P53877	555 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	SFB2	P53953	876 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	YDR286C	Q05530	114 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	YPQ2	Q06328	317 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	ATG13	Q06628	738 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	VPS36	Q06696	566 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	OPY2	Q06810	360 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	TFC8	Q12308	588 aa		4.65	□□□□□ -1.67
SSB1	YDL229W	NUP159	P40477	1460 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	PDR15	Q04182	1529 aa	Known RBP	4.64	□□□□□ -1.67
SSB1	YDL229W	PDE2	P06776	526 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	YML002W	P0CF17	737 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	KRS1	P15180	591 aa	Known RBP	4.64	□□□□□ -1.67
SSB1	YDL229W	CKA2	P19454	339 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	YAP1	P19880	650 aa	Known RBP	4.64	□□□□□ -1.67
SSB1	YDL229W	RAD27	P26793	382 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	SEC21	P32074	935 aa	Known RBP	4.64	□□□□□ -1.67
SSB1	YDL229W	JNM1	P36224	373 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	CCL1	P37366	393 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	YHL012W	P38709	493 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	MSR1	P38714	643 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	MBP1	P39678	833 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	ZRG8	P40021	1076 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	KAP123	P40069	1113 aa	Known RBP	4.64	□□□□□ -1.67
SSB1	YDL229W	YIL092W	P40497	633 aa		4.64	□□□□□ -1.67
SSB1	YDL229W	CNN1	P43618	361 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms