RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC50	YCR094W	POA1	P38218	177 aa		4.21	□□□□□ -1.74
CDC50	YCR094W	MXR1	P40029	184 aa		4.21	□□□□□ -1.74
CDC50	YCR094W	MPH1	P40562	993 aa		4.21	□□□□□ -1.74
CDC50	YCR094W	MRPS18	P42847	217 aa		4.21	□□□□□ -1.74
CDC50	YCR094W	HFM1	P51979	1187 aa		4.21	□□□□□ -1.74
CDC50	YCR094W	UBA2	P52488	636 aa		4.21	□□□□□ -1.74
CDC50	YCR094W	MSC6	Q08818	692 aa	Known RBP	4.21	□□□□□ -1.74
CDC50	YCR094W	BI4	P03879	638 aa		4.2	□□□□□ -1.74
CDC50	YCR094W	THI12	P42883	340 aa		4.2	□□□□□ -1.74
CDC50	YCR094W	THI5	P43534	340 aa		4.2	□□□□□ -1.74
CDC50	YCR094W	CHA4	P43634	648 aa		4.2	□□□□□ -1.74
CDC50	YCR094W	THI11	P47183	340 aa		4.2	□□□□□ -1.74
CDC50	YCR094W	THI13	Q07748	340 aa		4.2	□□□□□ -1.74
CDC50	YCR094W	ZRG8	P40021	1076 aa		4.19	□□□□□ -1.74
CDC50	YCR094W	RRT14	P40470	206 aa		4.19	□□□□□ -1.74
CDC50	YCR094W	YGR122W	P53272	402 aa		4.19	□□□□□ -1.74
CDC50	YCR094W	KCS1	Q12494	1050 aa		4.19	□□□□□ -1.74
CDC50	YCR094W	RPL11A	P0C0W9	174 aa	Known RBP	4.18	□□□□□ -1.74
CDC50	YCR094W	DBP2	P24783	546 aa	Known RBP	4.18	□□□□□ -1.74
CDC50	YCR094W	TAF7	Q05021	590 aa		4.18	□□□□□ -1.74
CDC50	YCR094W	MRL1	Q06815	381 aa		4.18	□□□□□ -1.74
CDC50	YCR094W	XYL2	Q07993	356 aa		4.18	□□□□□ -1.74
CDC50	YCR094W	ACM1	Q08981	209 aa		4.18	□□□□□ -1.74
CDC50	YCR094W	RPL11B	Q3E757	174 aa	Predicted RBP	4.18	□□□□□ -1.74
CDC50	YCR094W	SLA2	P33338	968 aa		4.17	□□□□□ -1.74
CDC50	YCR094W	SSF1	P38789	453 aa	Predicted RBP	4.17	□□□□□ -1.74
CDC50	YCR094W	STM1	P39015	273 aa	Known RBP	4.17	□□□□□ -1.74
CDC50	YCR094W	GCR1	P07261	785 aa		4.16	□□□□□ -1.74
CDC50	YCR094W	RAD2	P07276	1031 aa		4.16	□□□□□ -1.74
CDC50	YCR094W	ENA1	P13587	1091 aa		4.16	□□□□□ -1.74
CDC50	YCR094W	ENA2	Q01896	1091 aa		4.16	□□□□□ -1.74
CDC50	YCR094W	LAS17	Q12446	633 aa		4.16	□□□□□ -1.74
CDC50	YCR094W	ENA5	Q12691	1091 aa		4.16	□□□□□ -1.74
CDC50	YCR094W	GEM1	P39722	662 aa		4.15	□□□□□ -1.75
CDC50	YCR094W	ATF1	P40353	525 aa		4.15	□□□□□ -1.75
CDC50	YCR094W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
CDC50	YCR094W	GNT1	Q12096	491 aa		4.15	□□□□□ -1.75
CDC50	YCR094W	MTC3	P53077	123 aa		4.14	□□□□□ -1.75
CDC50	YCR094W	BDF2	Q07442	638 aa		4.14	□□□□□ -1.75
CDC50	YCR094W	RPP2A	P05319	106 aa	Known RBP	4.13	□□□□□ -1.75
CDC50	YCR094W	CYC8	P14922	966 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	EFT1	P32324	842 aa	Known RBP	4.13	□□□□□ -1.75
CDC50	YCR094W	RER2	P35196	286 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	MCM7	P38132	845 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	PNT1	P38969	423 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	QRI1	P43123	477 aa	Known RBP	4.13	□□□□□ -1.75
CDC50	YCR094W	TIF35	Q04067	274 aa	Known RBP	4.13	□□□□□ -1.75
CDC50	YCR094W	TMN2	Q04562	672 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	YLR040C	Q07988	224 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	YOL073C	Q08232	322 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	ENB1	Q08299	606 aa		4.13	□□□□□ -1.75
CDC50	YCR094W	THS1	P04801	734 aa	Known RBP	4.12	□□□□□ -1.75
CDC50	YCR094W	RPS26A	P39938	119 aa	Known RBP	4.12	□□□□□ -1.75
CDC50	YCR094W	RPS26B	P39939	119 aa	Known RBP	4.12	□□□□□ -1.75
CDC50	YCR094W	BUL1	P48524	976 aa		4.12	□□□□□ -1.75
CDC50	YCR094W	YAP1801	P38856	637 aa		4.11	□□□□□ -1.75
CDC50	YCR094W	SNM1	P40993	198 aa		4.11	□□□□□ -1.75
CDC50	YCR094W	STU2	P46675	888 aa		4.11	□□□□□ -1.75
CDC50	YCR094W	LGE1	Q02796	332 aa	Known RBP	4.11	□□□□□ -1.75
CDC50	YCR094W	CDA1	Q06702	301 aa		4.11	□□□□□ -1.75
CDC50	YCR094W	OSW2	Q12202	724 aa		4.11	□□□□□ -1.75
CDC50	YCR094W	NPC2	Q12408	173 aa		4.11	□□□□□ -1.75
CDC50	YCR094W	SPE1	P08432	466 aa		4.1	□□□□□ -1.75
CDC50	YCR094W	SUL1	P38359	859 aa		4.1	□□□□□ -1.75
CDC50	YCR094W	YGR012W	P53206	393 aa		4.1	□□□□□ -1.75
CDC50	YCR094W	SPP382	Q06411	708 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC50	YCR094W	KAR4	P25583	335 aa		4.09	□□□□□ -1.75
CDC50	YCR094W	STB4	P50104	949 aa		4.09	□□□□□ -1.75
CDC50	YCR094W	NCS6	P53088	359 aa		4.09	□□□□□ -1.75
CDC50	YCR094W	MCH5	Q08777	521 aa		4.09	□□□□□ -1.75
CDC50	YCR094W	SRP101	P32916	621 aa		4.08	□□□□□ -1.76
CDC50	YCR094W	CUE2	P36075	443 aa	Known RBP	4.08	□□□□□ -1.76
CDC50	YCR094W	SEC20	P28791	383 aa		4.07	□□□□□ -1.76
CDC50	YCR094W	KTR4	P38131	464 aa		4.07	□□□□□ -1.76
CDC50	YCR094W	IPL1	P38991	367 aa		4.07	□□□□□ -1.76
CDC50	YCR094W	URM1	P40554	99 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC50	YCR094W	OMS1	Q06668	471 aa		4.07	□□□□□ -1.76
CDC50	YCR094W	IRC10	Q08118	586 aa		4.07	□□□□□ -1.76
CDC50	YCR094W	ERG4	P25340	473 aa		4.06	□□□□□ -1.76
CDC50	YCR094W	RAD27	P26793	382 aa		4.06	□□□□□ -1.76
CDC50	YCR094W	MCM2	P29469	868 aa		4.06	□□□□□ -1.76
CDC50	YCR094W	YKL151C	P36059	337 aa		4.06	□□□□□ -1.76
CDC50	YCR094W	GUP2	Q08929	609 aa		4.06	□□□□□ -1.76
CDC50	YCR094W	HSF1	P10961	833 aa		4.05	□□□□□ -1.76
CDC50	YCR094W	ECM21	P38167	1117 aa	Known RBP	4.05	□□□□□ -1.76
CDC50	YCR094W	CCC2	P38995	1004 aa		4.05	□□□□□ -1.76
CDC50	YCR094W	PSP2	P50109	593 aa	Known RBP	4.05	□□□□□ -1.76
CDC50	YCR094W	YMR206W	Q03695	313 aa		4.05	□□□□□ -1.76
CDC50	YCR094W	WHI4	Q07655	649 aa	Known RBP	4.05	□□□□□ -1.76
CDC50	YCR094W	CAD1	P24813	409 aa	Known RBP	4.04	□□□□□ -1.76
CDC50	YCR094W	HRQ1	Q05549	1077 aa		4.04	□□□□□ -1.76
CDC50	YCR094W	MDM38	Q08179	573 aa		4.04	□□□□□ -1.76
CDC50	YCR094W	RTT10	Q08924	1013 aa		4.04	□□□□□ -1.76
CDC50	YCR094W	ACF2	Q12168	779 aa		4.04	□□□□□ -1.76
CDC50	YCR094W	MUK1	Q02866	612 aa		4.03	□□□□□ -1.76
CDC50	YCR094W	YPL066W	Q12194	479 aa		4.03	□□□□□ -1.76
CDC50	YCR094W	YLL058W	Q12198	575 aa		4.03	□□□□□ -1.76
CDC50	YCR094W	ATG19	P35193	415 aa		4.02	□□□□□ -1.77
CDC50	YCR094W	MTH1	P35198	433 aa		4.02	□□□□□ -1.77
CDC50	YCR094W	GIC1	P38785	314 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms