RNA–Protein interactions for RNA: YBR054W

YRO2, Transcript of Protein of unknown function with similarity to archaeal rhodopsins, yeast

Gene YRO2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRO2	YBR054W	YBR184W	P38299	523 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	YJL049W	P47048	450 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	AVT1	P47082	602 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	NNF1	P47149	201 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	MTC3	P53077	123 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
YRO2	YBR054W	RSM24	Q03976	319 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	HRQ1	Q05549	1077 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	YLL058W	Q12198	575 aa		4.61	□□□□□ -1.67
YRO2	YBR054W	KIN2	P13186	1147 aa	Known RBP	4.6	□□□□□ -1.67
YRO2	YBR054W	ELM1	P32801	640 aa		4.6	□□□□□ -1.67
YRO2	YBR054W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
YRO2	YBR054W	SNO2	P53823	222 aa		4.6	□□□□□ -1.67
YRO2	YBR054W	MRPL22	P53881	309 aa		4.6	□□□□□ -1.67
YRO2	YBR054W	SRP1	Q02821	542 aa	Known RBP	4.6	□□□□□ -1.67
YRO2	YBR054W	RIB2	Q12362	591 aa	Known RBP	4.6	□□□□□ -1.67
YRO2	YBR054W	RAD4	P14736	754 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	APL1	P27351	700 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	CDC12	P32468	407 aa	Known RBP	4.59	□□□□□ -1.67
YRO2	YBR054W	TSA1	P34760	196 aa	Known RBP	4.59	□□□□□ -1.67
YRO2	YBR054W	SAH1	P39954	449 aa	Known RBP	4.59	□□□□□ -1.67
YRO2	YBR054W	NIT1	P40447	199 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	PFD1	P46988	109 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	HFM1	P51979	1187 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	SIZ1	Q04195	904 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	DUS3	Q06053	668 aa	Known RBP	4.59	□□□□□ -1.67
YRO2	YBR054W	CDA2	Q06703	312 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	FMP25	Q08023	583 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	MDM38	Q08179	573 aa		4.59	□□□□□ -1.67
YRO2	YBR054W	CYC1	P00044	109 aa	Predicted RBP	4.58	□□□□□ -1.68
YRO2	YBR054W	PRP9	P19736	530 aa	Known RBP	4.58	□□□□□ -1.68
YRO2	YBR054W	GAS1	P22146	559 aa	Known RBP	4.58	□□□□□ -1.68
YRO2	YBR054W	RPL8B	P29453	256 aa	Known RBP	4.58	□□□□□ -1.68
YRO2	YBR054W	PRP43	P53131	767 aa	Known RBP	4.58	□□□□□ -1.68
YRO2	YBR054W	YDR306C	Q06640	478 aa		4.58	□□□□□ -1.68
YRO2	YBR054W	SPO75	Q07798	868 aa		4.58	□□□□□ -1.68
YRO2	YBR054W	SRM1	P21827	482 aa		4.57	□□□□□ -1.68
YRO2	YBR054W	UTP8	P53276	713 aa	Known RBP	4.57	□□□□□ -1.68
YRO2	YBR054W	GAL10	P04397	699 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	CMP2	P14747	604 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	RNQ1	P25367	405 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	AAR2	P32357	355 aa	Predicted RBP	4.56	□□□□□ -1.68
YRO2	YBR054W	GIC1	P38785	314 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	LAM1	P38851	1228 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	YAP1801	P38856	637 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	TIM54	P47045	478 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	ERP6	P53198	216 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	TPO2	P53283	614 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	SRT1	Q03175	343 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	MSC2	Q03455	724 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	SGD1	Q06132	899 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	YOR352W	Q08816	343 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	OSW2	Q12202	724 aa		4.56	□□□□□ -1.68
YRO2	YBR054W	FUN30	P31380	1131 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	PPH3	P32345	308 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	HBS1	P32769	611 aa	Known RBP	4.55	□□□□□ -1.68
YRO2	YBR054W	OCA5	P38738	679 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	SIT1	P39980	628 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	ALR2	P43553	858 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	EAF1	Q06337	982 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	XYL2	Q07993	356 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YRO2	YBR054W	OSH2	Q12451	1283 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	YOL098C	Q12496	1037 aa		4.55	□□□□□ -1.68
YRO2	YBR054W	ADE8	P04161	214 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	SCT1	P32784	759 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	MEF2	P39677	819 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	IRC24	P40580	263 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	GYP7	P48365	746 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	HUL5	P53119	910 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	RIM8	P53179	542 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	PLB2	Q03674	706 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	YDR132C	Q03900	495 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	NSE3	Q05541	303 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	BDF2	Q07442	638 aa		4.54	□□□□□ -1.68
YRO2	YBR054W	SOD2	P00447	233 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
YRO2	YBR054W	PRP6	P19735	899 aa	Predicted RBP	4.53	□□□□□ -1.68
YRO2	YBR054W	HSP60	P19882	572 aa	Known RBP	4.53	□□□□□ -1.68
YRO2	YBR054W	ARE1	P25628	610 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	CDC11	P32458	415 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	AFR1	P33304	620 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	YKR078W	P36158	585 aa	Known RBP	4.53	□□□□□ -1.68
YRO2	YBR054W	ECM21	P38167	1117 aa	Known RBP	4.53	□□□□□ -1.68
YRO2	YBR054W	AIM3	P38266	947 aa	Known RBP	4.53	□□□□□ -1.68
YRO2	YBR054W	TSL1	P38427	1098 aa	Known RBP	4.53	□□□□□ -1.68
YRO2	YBR054W	YHR020W	P38708	688 aa	Known RBP	4.53	□□□□□ -1.68
YRO2	YBR054W	NPP2	P39997	493 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	IOC3	P43596	787 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	YGR125W	P53273	1036 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	GCN5	Q03330	439 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	ROT1	Q03691	256 aa		4.53	□□□□□ -1.68
YRO2	YBR054W	CIT1	P00890	479 aa		4.52	□□□□□ -1.69
YRO2	YBR054W	RPS13	P05756	151 aa	Known RBP	4.52	□□□□□ -1.69
YRO2	YBR054W	NPP1	P25353	742 aa		4.52	□□□□□ -1.69
YRO2	YBR054W	YRO2	P38079	344 aa		4.52	□□□□□ -1.69
YRO2	YBR054W	CCC2	P38995	1004 aa		4.52	□□□□□ -1.69
YRO2	YBR054W	UBP5	P39944	805 aa		4.52	□□□□□ -1.69
YRO2	YBR054W	YER158C	P40095	573 aa		4.52	□□□□□ -1.69
YRO2	YBR054W	PBP1	P53297	722 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms