RNA–Protein interactions for RNA: ENST00000641970.1

LINC02228-203, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 1,355 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-203ENST00000641970 COL15A1P39059 1388 aa28.48■■■□□ 2.15
LINC02228-203ENST00000641970 CANXP27824 592 aaKnown RBP28.48■■■□□ 2.15
LINC02228-203ENST00000641970 FKBP8Q14318 412 aa28.47■■■□□ 2.15
LINC02228-203ENST00000641970 PNISRQ8TF01 805 aaKnown RBP28.46■■■□□ 2.15
LINC02228-203ENST00000641970 NARFQ9UHQ1 456 aa28.46■■■□□ 2.15
LINC02228-203ENST00000641970 A0A087WZG4 1122 aa28.45■■■□□ 2.14
LINC02228-203ENST00000641970 WDR43Q15061 677 aaKnown RBP eCLIP28.45■■■□□ 2.14
LINC02228-203ENST00000641970 USPL1Q5W0Q7 1092 aa28.45■■■□□ 2.14
LINC02228-203ENST00000641970 UBR2Q8IWV8 1755 aa28.45■■■□□ 2.14
LINC02228-203ENST00000641970 GRIN3BO60391 1043 aa28.44■■■□□ 2.14
LINC02228-203ENST00000641970 SNRPA1P09661 255 aaKnown RBP28.44■■■□□ 2.14
LINC02228-203ENST00000641970 EIF5P55010 431 aaKnown RBP28.44■■■□□ 2.14
LINC02228-203ENST00000641970 MYH14Q7Z406 1995 aaKnown RBP28.42■■■□□ 2.14
LINC02228-203ENST00000641970 YBX3P16989 372 aaKnown RBP eCLIP28.41■■■□□ 2.14
LINC02228-203ENST00000641970 IL6STP40189 918 aaPredicted RBP28.41■■■□□ 2.14
LINC02228-203ENST00000641970 NPM2Q86SE8 214 aaKnown RBP28.41■■■□□ 2.14
LINC02228-203ENST00000641970 SIPA1L3O60292 1781 aaPredicted RBP28.41■■■□□ 2.14
LINC02228-203ENST00000641970 TGFB2P61812 414 aa28.4■■■□□ 2.14
LINC02228-203ENST00000641970 ZNF316A6NFI3 1004 aaPredicted RBP28.39■■■□□ 2.14
LINC02228-203ENST00000641970 A1BGP04217 495 aa28.39■■■□□ 2.14
LINC02228-203ENST00000641970 TM4SF1P30408 202 aa28.39■■■□□ 2.14
LINC02228-203ENST00000641970 RIPK4P57078 832 aa28.39■■■□□ 2.14
LINC02228-203ENST00000641970 LMOD3Q0VAK6 560 aa28.39■■■□□ 2.14
LINC02228-203ENST00000641970 C10orf71Q711Q0 1435 aa28.39■■■□□ 2.14
LINC02228-203ENST00000641970 DDR1Q08345 913 aa28.38■■■□□ 2.13
LINC02228-203ENST00000641970 THUMPD2Q9BTF0 503 aaKnown RBP28.38■■■□□ 2.13
LINC02228-203ENST00000641970 MIS18AQ9NYP9 233 aa28.38■■■□□ 2.13
LINC02228-203ENST00000641970 ZNF330Q9Y3S2 320 aaPredicted RBP28.38■■■□□ 2.13
LINC02228-203ENST00000641970 USP16Q9Y5T5 823 aa28.38■■■□□ 2.13
LINC02228-203ENST00000641970 TMPOP42166 694 aaKnown RBP28.37■■■□□ 2.13
LINC02228-203ENST00000641970 RUNDC1Q96C34 613 aa28.37■■■□□ 2.13
LINC02228-203ENST00000641970 C4AP0C0L4 1744 aa28.37■■■□□ 2.13
LINC02228-203ENST00000641970 VIRMAQ69YN4 1812 aaKnown RBP28.36■■■□□ 2.13
LINC02228-203ENST00000641970 POLRMTO00411 1230 aaKnown RBP28.36■■■□□ 2.13
LINC02228-203ENST00000641970 NFIXQ14938 502 aa28.36■■■□□ 2.13
LINC02228-203ENST00000641970 BCL2L12Q9HB09 334 aa28.36■■■□□ 2.13
LINC02228-203ENST00000641970 ADAMTS8Q9UP79 889 aa28.36■■■□□ 2.13
LINC02228-203ENST00000641970 PRAMEF22A3QJZ6 481 aa28.35■■■□□ 2.13
LINC02228-203ENST00000641970 CCDC146Q8IYE0 955 aa28.35■■■□□ 2.13
LINC02228-203ENST00000641970 PXDNLA1KZ92 1463 aa28.33■■■□□ 2.13
LINC02228-203ENST00000641970 TBC1D2BQ9UPU7 963 aa28.32■■■□□ 2.12
LINC02228-203ENST00000641970 A0A0G2JLW4 131 aa28.31■■■□□ 2.12
LINC02228-203ENST00000641970 EIF4A1P60842 406 aaKnown RBP28.31■■■□□ 2.12
LINC02228-203ENST00000641970 BABAM1Q9NWV8 329 aa28.31■■■□□ 2.12
LINC02228-203ENST00000641970 RRP7AQ9Y3A4 280 aaKnown RBP28.3■■■□□ 2.12
LINC02228-203ENST00000641970 GIGYF1O75420 1035 aaPredicted RBP28.29■■■□□ 2.12
LINC02228-203ENST00000641970 DPEP1P16444 411 aa28.29■■■□□ 2.12
LINC02228-203ENST00000641970 DZIP3Q86Y13 1208 aaKnown RBP28.29■■■□□ 2.12
LINC02228-203ENST00000641970 TSPYL4Q9UJ04 414 aa28.29■■■□□ 2.12
LINC02228-203ENST00000641970 WWC3Q9ULE0 1092 aa28.29■■■□□ 2.12
LINC02228-203ENST00000641970 NEUROD2Q15784 382 aa28.28■■■□□ 2.12
LINC02228-203ENST00000641970 CAMTA2O94983 1202 aa28.27■■■□□ 2.12
LINC02228-203ENST00000641970 SERPINB2P05120 415 aa28.27■■■□□ 2.12
LINC02228-203ENST00000641970 PIP4K2AP48426 406 aaPredicted RBP28.27■■■□□ 2.12
LINC02228-203ENST00000641970 BICDL1Q6ZP65 573 aa28.26■■■□□ 2.12
LINC02228-203ENST00000641970 NBPF26B4DH59 902 aa28.25■■■□□ 2.11
LINC02228-203ENST00000641970 TBC1D9BQ66K14 1250 aa28.25■■■□□ 2.11
LINC02228-203ENST00000641970 NBPF10Q6P3W6 841 aaKnown RBP28.25■■■□□ 2.11
LINC02228-203ENST00000641970 NBPF15Q8N660 670 aa28.25■■■□□ 2.11
LINC02228-203ENST00000641970 BCS1LQ9Y276 419 aa28.24■■■□□ 2.11
LINC02228-203ENST00000641970 ZNF784Q8NCA9 323 aaPredicted RBP28.24■■■□□ 2.11
LINC02228-203ENST00000641970 PIM2Q9P1W9 311 aa28.24■■■□□ 2.11
LINC02228-203ENST00000641970 ZNF652Q9Y2D9 606 aa28.24■■■□□ 2.11
LINC02228-203ENST00000641970 RGL2O15211 777 aa28.23■■■□□ 2.11
LINC02228-203ENST00000641970 CLEC4GQ6UXB4 293 aa28.23■■■□□ 2.11
LINC02228-203ENST00000641970 SETDB2Q96T68 719 aa28.23■■■□□ 2.11
LINC02228-203ENST00000641970 TRIM35Q9UPQ4 493 aa28.23■■■□□ 2.11
LINC02228-203ENST00000641970 CARMIL3Q8ND23 1372 aa28.22■■■□□ 2.11
LINC02228-203ENST00000641970 KCNA3P22001 575 aa28.22■■■□□ 2.11
LINC02228-203ENST00000641970 ANP32CO43423 234 aa28.21■■■□□ 2.11
LINC02228-203ENST00000641970 KIF13BQ9NQT8 1826 aa28.19■■■□□ 2.1
LINC02228-203ENST00000641970 CHRNA5P30532 468 aa28.19■■■□□ 2.1
LINC02228-203ENST00000641970 ERBB4Q15303 1308 aa28.19■■■□□ 2.1
LINC02228-203ENST00000641970 CHL1O00533 1208 aa28.18■■■□□ 2.1
LINC02228-203ENST00000641970 DALRD3Q5D0E6 543 aaKnown RBP28.18■■■□□ 2.1
LINC02228-203ENST00000641970 DLG5Q8TDM6 1919 aa28.17■■■□□ 2.1
LINC02228-203ENST00000641970 KDM3BQ7LBC6 1761 aa28.16■■■□□ 2.1
LINC02228-203ENST00000641970 APAF1O14727 1248 aa28.16■■■□□ 2.1
LINC02228-203ENST00000641970 SCN7AQ01118 1682 aa28.16■■■□□ 2.1
LINC02228-203ENST00000641970 NPHP1O15259 732 aa28.15■■■□□ 2.1
LINC02228-203ENST00000641970 CNBD1Q8NA66 436 aa28.15■■■□□ 2.1
LINC02228-203ENST00000641970 PDZRN3Q9UPQ7 1066 aa28.15■■■□□ 2.1
LINC02228-203ENST00000641970 UTRNP46939 3433 aa28.15■■■□□ 2.1
LINC02228-203ENST00000641970 PRR5LQ6MZQ0 368 aa28.14■■■□□ 2.1
LINC02228-203ENST00000641970 BRIP1Q9BX63 1249 aa28.14■■■□□ 2.1
LINC02228-203ENST00000641970 LAS1LQ9Y4W2 734 aaKnown RBP28.14■■■□□ 2.1
LINC02228-203ENST00000641970 KIAA1551Q9HCM1 1747 aa28.13■■■□□ 2.09
LINC02228-203ENST00000641970 H0YIN7 160 aa28.13■■■□□ 2.09
LINC02228-203ENST00000641970 CCDC184Q52MB2 194 aa28.13■■■□□ 2.09
LINC02228-203ENST00000641970 ERVV-1B6SEH8 477 aa28.12■■■□□ 2.09
LINC02228-203ENST00000641970 MYL6BP14649 208 aa28.12■■■□□ 2.09
LINC02228-203ENST00000641970 PDE6BP35913 854 aa28.12■■■□□ 2.09
LINC02228-203ENST00000641970 CALD1Q05682 793 aaKnown RBP28.12■■■□□ 2.09
LINC02228-203ENST00000641970 KIF6Q6ZMV9 814 aa28.12■■■□□ 2.09
LINC02228-203ENST00000641970 ARHGAP27Q6ZUM4 889 aa28.12■■■□□ 2.09
LINC02228-203ENST00000641970 C2CD5Q86YS7 1000 aa28.12■■■□□ 2.09
LINC02228-203ENST00000641970 NGEFQ8N5V2 710 aa28.12■■■□□ 2.09
LINC02228-203ENST00000641970 ST5P78524 1137 aa28.11■■■□□ 2.09
LINC02228-203ENST00000641970 NBPF5PQ86XG9 351 aaPredicted RBP28.11■■■□□ 2.09
LINC02228-203ENST00000641970 CFAP44Q96MT7 982 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms