RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CHRNA5P30532 468 aa22.51■■□□□ 1.19
PHGDH-213ENST00000641272 NRXN2Q9P2S2 1712 aa22.51■■□□□ 1.19
PHGDH-213ENST00000641272 KCNA3P22001 575 aa22.49■■□□□ 1.19
PHGDH-213ENST00000641272 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
PHGDH-213ENST00000641272 DLEC1Q9Y238 1755 aa22.48■■□□□ 1.19
PHGDH-213ENST00000641272 CANXP27824 592 aaKnown RBP22.48■■□□□ 1.19
PHGDH-213ENST00000641272 TEFQ10587 303 aa22.47■■□□□ 1.19
PHGDH-213ENST00000641272 GAS2L2Q8NHY3 880 aa22.47■■□□□ 1.19
PHGDH-213ENST00000641272 KIF3CO14782 793 aa22.46■■□□□ 1.19
PHGDH-213ENST00000641272 NFIXQ14938 502 aa22.46■■□□□ 1.19
PHGDH-213ENST00000641272 IL17REQ8NFR9 667 aa22.46■■□□□ 1.19
PHGDH-213ENST00000641272 ZNF496Q96IT1 587 aaPredicted RBP22.46■■□□□ 1.19
PHGDH-213ENST00000641272 PIM2Q9P1W9 311 aa22.46■■□□□ 1.19
PHGDH-213ENST00000641272 ZNF330Q9Y3S2 320 aaPredicted RBP22.46■■□□□ 1.19
PHGDH-213ENST00000641272 CARMIL3Q8ND23 1372 aa22.46■■□□□ 1.19
PHGDH-213ENST00000641272 GNAT3A8MTJ3 354 aa22.45■■□□□ 1.18
PHGDH-213ENST00000641272 TM4SF1P30408 202 aa22.45■■□□□ 1.18
PHGDH-213ENST00000641272 PRKAR2BP31323 418 aa22.45■■□□□ 1.18
PHGDH-213ENST00000641272 BCL2L12Q9HB09 334 aa22.45■■□□□ 1.18
PHGDH-213ENST00000641272 NARFQ9UHQ1 456 aa22.45■■□□□ 1.18
PHGDH-213ENST00000641272 DALRD3Q5D0E6 543 aaKnown RBP22.44■■□□□ 1.18
PHGDH-213ENST00000641272 VSIG10Q8N0Z9 540 aa22.44■■□□□ 1.18
PHGDH-213ENST00000641272 CFAP53Q96M91 514 aa22.44■■□□□ 1.18
PHGDH-213ENST00000641272 HEG1Q9ULI3 1381 aa22.44■■□□□ 1.18
PHGDH-213ENST00000641272 C9orf131Q5VYM1 1079 aa22.43■■□□□ 1.18
PHGDH-213ENST00000641272 BICDL1Q6ZP65 573 aa22.43■■□□□ 1.18
PHGDH-213ENST00000641272 PHACTR3Q96KR7 559 aa22.43■■□□□ 1.18
PHGDH-213ENST00000641272 ANKRD31Q8N7Z5 1873 aa22.43■■□□□ 1.18
PHGDH-213ENST00000641272 BCORQ6W2J9 1755 aa22.43■■□□□ 1.18
PHGDH-213ENST00000641272 COL11A2P13942 1736 aaPredicted RBP22.43■■□□□ 1.18
PHGDH-213ENST00000641272 ZNF790Q6PG37 636 aa22.42■■□□□ 1.18
PHGDH-213ENST00000641272 RSPH6AQ9H0K4 717 aa22.42■■□□□ 1.18
PHGDH-213ENST00000641272 SBF1O95248 1867 aa22.42■■□□□ 1.18
PHGDH-213ENST00000641272 NMRK2Q9NPI5 230 aa22.41■■□□□ 1.18
PHGDH-213ENST00000641272 CEMIPQ8WUJ3 1361 aa22.4■■□□□ 1.18
PHGDH-213ENST00000641272 STARD3NLO95772 234 aa22.4■■□□□ 1.18
PHGDH-213ENST00000641272 HSPA6P17066 643 aa22.4■■□□□ 1.18
PHGDH-213ENST00000641272 RASSF7Q02833 373 aa22.4■■□□□ 1.18
PHGDH-213ENST00000641272 TIAM2Q8IVF5 1701 aa22.4■■□□□ 1.18
PHGDH-213ENST00000641272 CEP350Q5VT06 3117 aa22.4■■□□□ 1.18
PHGDH-213ENST00000641272 KCNQ3O43525 872 aa22.39■■□□□ 1.17
PHGDH-213ENST00000641272 SERPINB2P05120 415 aa22.39■■□□□ 1.17
PHGDH-213ENST00000641272 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
PHGDH-213ENST00000641272 RNF181Q9P0P0 153 aa22.39■■□□□ 1.17
PHGDH-213ENST00000641272 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
PHGDH-213ENST00000641272 EIF5P55010 431 aaKnown RBP22.38■■□□□ 1.17
PHGDH-213ENST00000641272 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.17
PHGDH-213ENST00000641272 CACNA1SQ13698 1873 aa22.38■■□□□ 1.17
PHGDH-213ENST00000641272 TNRC6CQ9HCJ0 1690 aaKnown RBP22.36■■□□□ 1.17
PHGDH-213ENST00000641272 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
PHGDH-213ENST00000641272 TBC1D9BQ66K14 1250 aa22.36■■□□□ 1.17
PHGDH-213ENST00000641272 MCM10Q7L590 875 aa22.36■■□□□ 1.17
PHGDH-213ENST00000641272 CCDC24Q8N4L8 307 aa22.36■■□□□ 1.17
PHGDH-213ENST00000641272 FMNL2Q96PY5 1086 aa22.36■■□□□ 1.17
PHGDH-213ENST00000641272 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
PHGDH-213ENST00000641272 BTBD11A6QL63 1104 aa22.35■■□□□ 1.17
PHGDH-213ENST00000641272 A1BGP04217 495 aa22.35■■□□□ 1.17
PHGDH-213ENST00000641272 C2CD5Q86YS7 1000 aa22.35■■□□□ 1.17
PHGDH-213ENST00000641272 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
PHGDH-213ENST00000641272 DLG5Q8TDM6 1919 aa22.34■■□□□ 1.17
PHGDH-213ENST00000641272 A0A087WZG4 1122 aa22.34■■□□□ 1.17
PHGDH-213ENST00000641272 CCDC88AQ3V6T2 1871 aa22.34■■□□□ 1.17
PHGDH-213ENST00000641272 PRAMEF22A3QJZ6 481 aa22.33■■□□□ 1.17
PHGDH-213ENST00000641272 DCTN1Q14203 1278 aa22.33■■□□□ 1.17
PHGDH-213ENST00000641272 LAMB4A4D0S4 1761 aa22.33■■□□□ 1.16
PHGDH-213ENST00000641272 IL6STP40189 918 aaPredicted RBP22.31■■□□□ 1.16
PHGDH-213ENST00000641272 RTF1Q92541 710 aaKnown RBP22.31■■□□□ 1.16
PHGDH-213ENST00000641272 TEX13AQ9BXU3 409 aaPredicted RBP22.31■■□□□ 1.16
PHGDH-213ENST00000641272 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
PHGDH-213ENST00000641272 ZNF219Q9P2Y4 722 aaPredicted RBP22.3■■□□□ 1.16
PHGDH-213ENST00000641272 TOMM70O94826 608 aa22.29■■□□□ 1.16
PHGDH-213ENST00000641272 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
PHGDH-213ENST00000641272 PRR5LQ6MZQ0 368 aa22.29■■□□□ 1.16
PHGDH-213ENST00000641272 NPM2Q86SE8 214 aaKnown RBP22.29■■□□□ 1.16
PHGDH-213ENST00000641272 TTLL6Q8N841 843 aa22.29■■□□□ 1.16
PHGDH-213ENST00000641272 H0YIN7 160 aa22.28■■□□□ 1.16
PHGDH-213ENST00000641272 PRELPP51888 382 aa22.28■■□□□ 1.16
PHGDH-213ENST00000641272 DZIP3Q86Y13 1208 aaKnown RBP22.28■■□□□ 1.16
PHGDH-213ENST00000641272 USP16Q9Y5T5 823 aa22.28■■□□□ 1.16
PHGDH-213ENST00000641272 KDM3BQ7LBC6 1761 aa22.27■■□□□ 1.16
PHGDH-213ENST00000641272 NPHP1O15259 732 aa22.27■■□□□ 1.16
PHGDH-213ENST00000641272 C16orf71Q8IYS4 520 aaPredicted RBP22.27■■□□□ 1.16
PHGDH-213ENST00000641272 ZNF622Q969S3 477 aaKnown RBP eCLIP22.27■■□□□ 1.162e-6■■■□□ 15.2
PHGDH-213ENST00000641272 ARFGEF2Q9Y6D5 1785 aa22.27■■□□□ 1.16
PHGDH-213ENST00000641272 KDM2BQ8NHM5 1336 aa22.27■■□□□ 1.16
PHGDH-213ENST00000641272 CNBD1Q8NA66 436 aa22.26■■□□□ 1.15
PHGDH-213ENST00000641272 NFKBIEO00221 500 aa22.25■■□□□ 1.15
PHGDH-213ENST00000641272 RRAGCQ9HB90 399 aa22.25■■□□□ 1.15
PHGDH-213ENST00000641272 FER1L6Q2WGJ9 1857 aa22.25■■□□□ 1.15
PHGDH-213ENST00000641272 SLX4Q8IY92 1834 aa22.24■■□□□ 1.15
PHGDH-213ENST00000641272 LMNB1P20700 586 aa22.23■■□□□ 1.15
PHGDH-213ENST00000641272 SETDB2Q96T68 719 aa22.23■■□□□ 1.15
PHGDH-213ENST00000641272 BRIP1Q9BX63 1249 aa22.23■■□□□ 1.15
PHGDH-213ENST00000641272 SNRPA1P09661 255 aaKnown RBP22.22■■□□□ 1.15
PHGDH-213ENST00000641272 PDE6BP35913 854 aa22.22■■□□□ 1.15
PHGDH-213ENST00000641272 APLP1P51693 650 aa22.22■■□□□ 1.15
PHGDH-213ENST00000641272 HTRA3P83110 453 aa22.22■■□□□ 1.15
PHGDH-213ENST00000641272 RBM46Q8TBY0 533 aaKnown RBP22.22■■□□□ 1.15
PHGDH-213ENST00000641272 MIS18AQ9NYP9 233 aa22.22■■□□□ 1.15
PHGDH-213ENST00000641272 DICER1Q9UPY3 1922 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms