RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 DDX10Q13206 875 aaKnown RBP21.89■■□□□ 1.09
COLCA2-207ENST00000639470 PARP3Q9Y6F1 533 aa21.89■■□□□ 1.09
COLCA2-207ENST00000639470 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
COLCA2-207ENST00000639470 GRIN3BO60391 1043 aa21.88■■□□□ 1.09
COLCA2-207ENST00000639470 SIPA1L3O60292 1781 aaPredicted RBP21.88■■□□□ 1.09
COLCA2-207ENST00000639470 CHD4Q14839 1912 aa21.88■■□□□ 1.09
COLCA2-207ENST00000639470 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
COLCA2-207ENST00000639470 POLRMTO00411 1230 aaKnown RBP21.87■■□□□ 1.09
COLCA2-207ENST00000639470 FCHSD2O94868 740 aa21.87■■□□□ 1.09
COLCA2-207ENST00000639470 BTBD11A6QL63 1104 aa21.86■■□□□ 1.09
COLCA2-207ENST00000639470 A1BGP04217 495 aa21.86■■□□□ 1.09
COLCA2-207ENST00000639470 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
COLCA2-207ENST00000639470 KCNA3P22001 575 aa21.85■■□□□ 1.09
COLCA2-207ENST00000639470 TM4SF1P30408 202 aa21.85■■□□□ 1.09
COLCA2-207ENST00000639470 NFIXQ14938 502 aa21.85■■□□□ 1.09
COLCA2-207ENST00000639470 THUMPD2Q9BTF0 503 aaKnown RBP21.85■■□□□ 1.09
COLCA2-207ENST00000639470 MIS18AQ9NYP9 233 aa21.85■■□□□ 1.09
COLCA2-207ENST00000639470 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
COLCA2-207ENST00000639470 ZPR1O75312 459 aa21.84■■□□□ 1.09
COLCA2-207ENST00000639470 CHRNA5P30532 468 aa21.84■■□□□ 1.09
COLCA2-207ENST00000639470 BCS1LQ9Y276 419 aa21.84■■□□□ 1.09
COLCA2-207ENST00000639470 KIF13BQ9NQT8 1826 aa21.83■■□□□ 1.09
COLCA2-207ENST00000639470 PLEKHF1Q96S99 279 aa21.83■■□□□ 1.09
COLCA2-207ENST00000639470 NARFQ9UHQ1 456 aa21.83■■□□□ 1.09
COLCA2-207ENST00000639470 USP16Q9Y5T5 823 aa21.83■■□□□ 1.09
COLCA2-207ENST00000639470 EIF5P55010 431 aaKnown RBP21.82■■□□□ 1.08
COLCA2-207ENST00000639470 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
COLCA2-207ENST00000639470 FMNL2Q96PY5 1086 aa21.82■■□□□ 1.08
COLCA2-207ENST00000639470 ATP10DQ9P241 1426 aa21.81■■□□□ 1.08
COLCA2-207ENST00000639470 STARD3NLO95772 234 aa21.81■■□□□ 1.08
COLCA2-207ENST00000639470 TGFB2P61812 414 aa21.81■■□□□ 1.08
COLCA2-207ENST00000639470 ZNF526Q8TF50 670 aaPredicted RBP21.81■■□□□ 1.08
COLCA2-207ENST00000639470 RTF1Q92541 710 aaKnown RBP21.81■■□□□ 1.08
COLCA2-207ENST00000639470 TBC1D2BQ9UPU7 963 aa21.81■■□□□ 1.08
COLCA2-207ENST00000639470 CARMIL3Q8ND23 1372 aa21.8■■□□□ 1.08
COLCA2-207ENST00000639470 CCDC24Q8N4L8 307 aa21.8■■□□□ 1.08
COLCA2-207ENST00000639470 ADCY9O60503 1353 aa21.78■■□□□ 1.08
COLCA2-207ENST00000639470 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
COLCA2-207ENST00000639470 SERPINB2P05120 415 aa21.76■■□□□ 1.07
COLCA2-207ENST00000639470 ARHGAP27Q6ZUM4 889 aa21.75■■□□□ 1.07
COLCA2-207ENST00000639470 NBPF26B4DH59 902 aa21.74■■□□□ 1.07
COLCA2-207ENST00000639470 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
COLCA2-207ENST00000639470 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
COLCA2-207ENST00000639470 NBPF10Q6P3W6 841 aaKnown RBP21.74■■□□□ 1.07
COLCA2-207ENST00000639470 NBPF15Q8N660 670 aa21.74■■□□□ 1.07
COLCA2-207ENST00000639470 HTATSF1O43719 755 aaKnown RBP21.73■■□□□ 1.07
COLCA2-207ENST00000639470 IL6STP40189 918 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-207ENST00000639470 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-207ENST00000639470 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-207ENST00000639470 AFDNP55196 1824 aaKnown RBP21.72■■□□□ 1.07
COLCA2-207ENST00000639470 GIGYF1O75420 1035 aaPredicted RBP21.72■■□□□ 1.07
COLCA2-207ENST00000639470 C1QTNF8P60827 252 aa21.72■■□□□ 1.07
COLCA2-207ENST00000639470 RALBP1Q15311 655 aa21.72■■□□□ 1.07
COLCA2-207ENST00000639470 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
COLCA2-207ENST00000639470 SCN7AQ01118 1682 aa21.72■■□□□ 1.07
COLCA2-207ENST00000639470 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
COLCA2-207ENST00000639470 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
COLCA2-207ENST00000639470 PIM2Q9P1W9 311 aa21.71■■□□□ 1.07
COLCA2-207ENST00000639470 RRP7AQ9Y3A4 280 aaKnown RBP21.71■■□□□ 1.07
COLCA2-207ENST00000639470 BRCA1P38398 1863 aaKnown RBP21.71■■□□□ 1.07
COLCA2-207ENST00000639470 NRXN2Q9P2S2 1712 aa21.7■■□□□ 1.06
COLCA2-207ENST00000639470 A0A087WZG4 1122 aa21.7■■□□□ 1.06
COLCA2-207ENST00000639470 DLG5Q8TDM6 1919 aa21.69■■□□□ 1.06
COLCA2-207ENST00000639470 DALRD3Q5D0E6 543 aaKnown RBP21.69■■□□□ 1.06
COLCA2-207ENST00000639470 MYBBP1AQ9BQG0 1328 aaKnown RBP21.69■■□□□ 1.06
COLCA2-207ENST00000639470 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
COLCA2-207ENST00000639470 PRR5LQ6MZQ0 368 aa21.68■■□□□ 1.06
COLCA2-207ENST00000639470 NEFMP07197 916 aa21.67■■□□□ 1.06
COLCA2-207ENST00000639470 EIF4A1P60842 406 aaKnown RBP21.67■■□□□ 1.06
COLCA2-207ENST00000639470 RASSF7Q02833 373 aa21.67■■□□□ 1.06
COLCA2-207ENST00000639470 C2CD5Q86YS7 1000 aa21.67■■□□□ 1.06
COLCA2-207ENST00000639470 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
COLCA2-207ENST00000639470 NGEFQ8N5V2 710 aa21.66■■□□□ 1.06
COLCA2-207ENST00000639470 PRELPP51888 382 aa21.65■■□□□ 1.06
COLCA2-207ENST00000639470 RIPK4P57078 832 aa21.65■■□□□ 1.06
COLCA2-207ENST00000639470 C9orf131Q5VYM1 1079 aa21.65■■□□□ 1.06
COLCA2-207ENST00000639470 SENP3-EIF4A1A0A087X0R7 540 aa21.64■■□□□ 1.05
COLCA2-207ENST00000639470 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
COLCA2-207ENST00000639470 NEUROD2Q15784 382 aa21.64■■□□□ 1.05
COLCA2-207ENST00000639470 HLFQ16534 295 aa21.64■■□□□ 1.05
COLCA2-207ENST00000639470 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
COLCA2-207ENST00000639470 FAM177BA6PVY3 158 aa21.63■■□□□ 1.05
COLCA2-207ENST00000639470 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
COLCA2-207ENST00000639470 BCORQ6W2J9 1755 aa21.63■■□□□ 1.05
COLCA2-207ENST00000639470 ANKRD31Q8N7Z5 1873 aa21.62■■□□□ 1.05
COLCA2-207ENST00000639470 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
COLCA2-207ENST00000639470 TTLL7Q6ZT98 887 aa21.61■■□□□ 1.05
COLCA2-207ENST00000639470 SETDB2Q96T68 719 aa21.61■■□□□ 1.05
COLCA2-207ENST00000639470 PRKRIP1Q9H875 184 aaPredicted RBP21.61■■□□□ 1.05
COLCA2-207ENST00000639470 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
COLCA2-207ENST00000639470 COL11A2P13942 1736 aaPredicted RBP21.6■■□□□ 1.05
COLCA2-207ENST00000639470 KIF3CO14782 793 aa21.6■■□□□ 1.05
COLCA2-207ENST00000639470 MYL6BP14649 208 aa21.6■■□□□ 1.05
COLCA2-207ENST00000639470 KRT24Q2M2I5 525 aa21.6■■□□□ 1.05
COLCA2-207ENST00000639470 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
COLCA2-207ENST00000639470 ZNF622Q969S3 477 aaKnown RBP eCLIP21.6■■□□□ 1.05
COLCA2-207ENST00000639470 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
COLCA2-207ENST00000639470 RNF181Q9P0P0 153 aa21.6■■□□□ 1.05
COLCA2-207ENST00000639470 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
COLCA2-207ENST00000639470 ARFGEF1Q9Y6D6 1849 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms