RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
NEDD4L-238ENST00000635997 KIAA0232Q92628 1395 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 TSHZ3Q63HK5 1081 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 MAP3K19Q56UN5 1328 aa17.13■□□□□ 0.33
NEDD4L-238ENST00000635997 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
NEDD4L-238ENST00000635997 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 COL17A1Q9UMD9 1497 aaPredicted RBP17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 ABCC1P33527 1531 aa17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 PZPP20742 1482 aa17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 HOXC9P31274 260 aa17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
NEDD4L-238ENST00000635997 PSMA5P28066 241 aa17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 NUCB2P80303 420 aa17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 MAP3K2Q9Y2U5 619 aa17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 ARHGEF12Q9NZN5 1544 aa17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 DNMT1P26358 1616 aaKnown RBP17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 RNF214Q8ND24 703 aa17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 ANKRD36BQ8N2N9 1353 aa17.1■□□□□ 0.33
NEDD4L-238ENST00000635997 FLT4P35916 1363 aa17.09■□□□□ 0.33
NEDD4L-238ENST00000635997 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
NEDD4L-238ENST00000635997 FIBPO43427 364 aa17.09■□□□□ 0.33
NEDD4L-238ENST00000635997 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-238ENST00000635997 EYA1Q99502 592 aa17.09■□□□□ 0.33
NEDD4L-238ENST00000635997 ALDH1L2Q3SY69 923 aa17.08■□□□□ 0.33
NEDD4L-238ENST00000635997 TSPYL6Q8N831 410 aa17.08■□□□□ 0.33
NEDD4L-238ENST00000635997 SPON1Q9HCB6 807 aa17.08■□□□□ 0.33
NEDD4L-238ENST00000635997 SNRKQ9NRH2 765 aa17.08■□□□□ 0.33
NEDD4L-238ENST00000635997 TCEAL9Q9UHQ7 104 aa17.08■□□□□ 0.33
NEDD4L-238ENST00000635997 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
NEDD4L-238ENST00000635997 KIF1BPQ96EK5 621 aa17.08■□□□□ 0.32
NEDD4L-238ENST00000635997 PLEKHH1Q9ULM0 1364 aa17.08■□□□□ 0.32
NEDD4L-238ENST00000635997 ZBTB7AO95365 584 aa17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 R3HDM1Q15032 1099 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 DZIP3Q86Y13 1208 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 PIBF1Q8WXW3 757 aa17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 SART3Q15020 963 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 H0YIN7 160 aa17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 MEIS3Q99687 375 aa17.07■□□□□ 0.32
NEDD4L-238ENST00000635997 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 NUP133Q8WUM0 1156 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■■■■□ 20.5
NEDD4L-238ENST00000635997 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 MX1P20591 662 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 DPY19L2Q6NUT2 758 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 IFIT5Q13325 482 aaKnown RBP17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 GCC2Q8IWJ2 1684 aa17.06■□□□□ 0.32
NEDD4L-238ENST00000635997 RABEP1Q15276 862 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 CYP46A1Q9Y6A2 500 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 IGHDP01880 384 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 HIP1O00291 1037 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 A0A1W2PP64 1363 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
NEDD4L-238ENST00000635997 ROBO2Q9HCK4 1378 aa17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 TDO2P48775 406 aa17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 SKOR2Q2VWA4 1001 aaPredicted RBP17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 CCDC73Q6ZRK6 1079 aa17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 XAGE3Q8WTP9 111 aa17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 CDC5LQ99459 802 aaKnown RBP17.04■□□□□ 0.32
NEDD4L-238ENST00000635997 NF2P35240 595 aa17.03■□□□□ 0.32
NEDD4L-238ENST00000635997 BLOC1S2Q6QNY1 142 aa17.03■□□□□ 0.32
NEDD4L-238ENST00000635997 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
NEDD4L-238ENST00000635997 NSD2O96028 1365 aa17.03■□□□□ 0.32
NEDD4L-238ENST00000635997 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
NEDD4L-238ENST00000635997 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
NEDD4L-238ENST00000635997 NACAP1Q9BZK3 213 aa17.02■□□□□ 0.32
NEDD4L-238ENST00000635997 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms