RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 SSFA2P28290 1259 aa12.77□□□□□ -0.37
SMARCA2-228ENST00000634772 RIPK4P57078 832 aa12.77□□□□□ -0.37
SMARCA2-228ENST00000634772 SLFN5Q08AF3 891 aa12.77□□□□□ -0.37
SMARCA2-228ENST00000634772 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
SMARCA2-228ENST00000634772 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
SMARCA2-228ENST00000634772 KDRP35968 1356 aa12.77□□□□□ -0.37
SMARCA2-228ENST00000634772 PXDNLA1KZ92 1463 aa12.77□□□□□ -0.37
SMARCA2-228ENST00000634772 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
SMARCA2-228ENST00000634772 E9PSI1 815 aa12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 GNPATO15228 680 aa12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 SLC34A2O95436 690 aa12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 NEUROD2Q15784 382 aa12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 RRP7AQ9Y3A4 280 aaKnown RBP12.75□□□□□ -0.37
SMARCA2-228ENST00000634772 IL16Q14005 1332 aa12.74□□□□□ -0.37
SMARCA2-228ENST00000634772 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
SMARCA2-228ENST00000634772 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
SMARCA2-228ENST00000634772 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
SMARCA2-228ENST00000634772 HTATSF1O43719 755 aaKnown RBP12.73□□□□□ -0.37
SMARCA2-228ENST00000634772 MMP10P09238 476 aa12.73□□□□□ -0.37
SMARCA2-228ENST00000634772 PHKG2P15735 406 aa12.73□□□□□ -0.37
SMARCA2-228ENST00000634772 CALD1Q05682 793 aaKnown RBP12.73□□□□□ -0.37
SMARCA2-228ENST00000634772 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
SMARCA2-228ENST00000634772 SPG7Q9UQ90 795 aa12.73□□□□□ -0.37
SMARCA2-228ENST00000634772 C10orf71Q711Q0 1435 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 ATP6V1AP38606 617 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 GAS2L2Q8NHY3 880 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.372e-8■■■■□ 21
SMARCA2-228ENST00000634772 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
SMARCA2-228ENST00000634772 A0A0G2JLW4 131 aa12.71□□□□□ -0.37
SMARCA2-228ENST00000634772 AMOTQ4VCS5 1084 aa12.71□□□□□ -0.37
SMARCA2-228ENST00000634772 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
SMARCA2-228ENST00000634772 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
SMARCA2-228ENST00000634772 PLEKHO1Q53GL0 409 aaPredicted RBP12.7□□□□□ -0.38
SMARCA2-228ENST00000634772 MYH16Q9H6N6 1097 aa12.7□□□□□ -0.38
SMARCA2-228ENST00000634772 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
SMARCA2-228ENST00000634772 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
SMARCA2-228ENST00000634772 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
SMARCA2-228ENST00000634772 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
SMARCA2-228ENST00000634772 PLEKHG2Q9H7P9 1386 aa12.69□□□□□ -0.38
SMARCA2-228ENST00000634772 GYS1P13807 737 aa12.68□□□□□ -0.38
SMARCA2-228ENST00000634772 DPEP1P16444 411 aa12.68□□□□□ -0.38
SMARCA2-228ENST00000634772 KCNA3P22001 575 aa12.68□□□□□ -0.38
SMARCA2-228ENST00000634772 APLP1P51693 650 aa12.68□□□□□ -0.38
SMARCA2-228ENST00000634772 TGFB2P61812 414 aa12.68□□□□□ -0.38
SMARCA2-228ENST00000634772 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
SMARCA2-228ENST00000634772 TOMM70O94826 608 aa12.67□□□□□ -0.38
SMARCA2-228ENST00000634772 TRAPPC3LQ5T215 181 aa12.67□□□□□ -0.38
SMARCA2-228ENST00000634772 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
SMARCA2-228ENST00000634772 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
SMARCA2-228ENST00000634772 KDM6AO15550 1401 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-228ENST00000634772 C4AP0C0L4 1744 aa12.67□□□□□ -0.38
SMARCA2-228ENST00000634772 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 GNAI1P63096 354 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 NLGN1Q8N2Q7 840 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 RTF1Q92541 710 aaKnown RBP12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
SMARCA2-228ENST00000634772 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
SMARCA2-228ENST00000634772 CT47B1P0C2W7 299 aaPredicted RBP12.65□□□□□ -0.38
SMARCA2-228ENST00000634772 HTRA3P83110 453 aa12.65□□□□□ -0.38
SMARCA2-228ENST00000634772 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
SMARCA2-228ENST00000634772 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
SMARCA2-228ENST00000634772 ERVV-2B6SEH9 535 aa12.64□□□□□ -0.39
SMARCA2-228ENST00000634772 RPS6KA4O75676 772 aa12.64□□□□□ -0.39
SMARCA2-228ENST00000634772 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
SMARCA2-228ENST00000634772 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
SMARCA2-228ENST00000634772 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
SMARCA2-228ENST00000634772 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
SMARCA2-228ENST00000634772 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
SMARCA2-228ENST00000634772 CHL1O00533 1208 aa12.63□□□□□ -0.39
SMARCA2-228ENST00000634772 DDR1Q08345 913 aa12.63□□□□□ -0.39
SMARCA2-228ENST00000634772 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
SMARCA2-228ENST00000634772 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
SMARCA2-228ENST00000634772 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
SMARCA2-228ENST00000634772 RFC4P35249 363 aa12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 EVX2Q03828 476 aa12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 FKBP8Q14318 412 aa12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 RBM46Q8TBY0 533 aaKnown RBP12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 PARP3Q9Y6F1 533 aa12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 WDR90Q96KV7 1748 aa12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
SMARCA2-228ENST00000634772 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 ZNF530Q6P9A1 599 aaPredicted RBP12.61□□□□□ -0.39
SMARCA2-228ENST00000634772 MCM10Q7L590 875 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms