RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NUCB1Q02818 461 aa8.94□□□□□ -0.98
BRCA1-230ENST00000634433 KRT24Q2M2I5 525 aa8.94□□□□□ -0.98
BRCA1-230ENST00000634433 ZNF530Q6P9A1 599 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-230ENST00000634433 HS6ST3Q8IZP7 471 aa8.94□□□□□ -0.98
BRCA1-230ENST00000634433 UPF2Q9HAU5 1272 aaKnown RBP8.94□□□□□ -0.98
BRCA1-230ENST00000634433 NCAPD2Q15021 1401 aa8.94□□□□□ -0.98
BRCA1-230ENST00000634433 AFF2P51816 1311 aa8.94□□□□□ -0.98
BRCA1-230ENST00000634433 LRRC37A3O60309 1634 aa8.93□□□□□ -0.98
BRCA1-230ENST00000634433 SPDYE4A6NLX3 237 aa8.93□□□□□ -0.98
BRCA1-230ENST00000634433 RPAP2Q8IXW5 612 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-230ENST00000634433 LRRC59Q96AG4 307 aaKnown RBP8.93□□□□□ -0.98
BRCA1-230ENST00000634433 TEFQ10587 303 aa8.93□□□□□ -0.98
BRCA1-230ENST00000634433 PLEKHG2Q9H7P9 1386 aa8.92□□□□□ -0.98
BRCA1-230ENST00000634433 OVOS2A0A0G2JMS6 1433 aa8.92□□□□□ -0.98
BRCA1-230ENST00000634433 UNCXA6NJT0 531 aa8.92□□□□□ -0.98
BRCA1-230ENST00000634433 CHD1LQ86WJ1 897 aa8.92□□□□□ -0.98
BRCA1-230ENST00000634433 CNPY4Q8N129 248 aa8.92□□□□□ -0.98
BRCA1-230ENST00000634433 TNS3Q68CZ2 1445 aa8.92□□□□□ -0.98
BRCA1-230ENST00000634433 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
BRCA1-230ENST00000634433 ALS2Q96Q42 1657 aa8.92□□□□□ -0.98
BRCA1-230ENST00000634433 RAPGEF4Q8WZA2 1011 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 SPATA31A3Q5VYP0 1347 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 ABCC6O95255 1503 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 RNMTO43148 476 aaKnown RBP8.91□□□□□ -0.98
BRCA1-230ENST00000634433 HMMRO75330 724 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 ANKRD45Q5TZF3 282 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 ANKRD44Q8N8A2 993 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 FBXW7Q969H0 707 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 AXIN2Q9Y2T1 843 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 ERBB3P21860 1342 aa8.91□□□□□ -0.98
BRCA1-230ENST00000634433 CACNA1FO60840 1977 aa8.9□□□□□ -0.98
BRCA1-230ENST00000634433 BTBD11A6QL63 1104 aa8.9□□□□□ -0.98
BRCA1-230ENST00000634433 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-230ENST00000634433 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-230ENST00000634433 TATP17735 454 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-230ENST00000634433 FLIIQ13045 1269 aa8.9□□□□□ -0.98
BRCA1-230ENST00000634433 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
BRCA1-230ENST00000634433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.984e-6■■■■■ 27.4
BRCA1-230ENST00000634433 SPG7Q9UQ90 795 aa8.9□□□□□ -0.98
BRCA1-230ENST00000634433 GNAI3P08754 354 aa8.9□□□□□ -0.99
BRCA1-230ENST00000634433 EIF4A1P60842 406 aaKnown RBP8.9□□□□□ -0.99
BRCA1-230ENST00000634433 BRINP3Q76B58 766 aa8.9□□□□□ -0.99
BRCA1-230ENST00000634433 DCTPP1Q9H773 170 aa8.9□□□□□ -0.99
BRCA1-230ENST00000634433 QTRT2Q9H974 415 aaKnown RBP8.9□□□□□ -0.99
BRCA1-230ENST00000634433 LGR6Q9HBX8 967 aa8.9□□□□□ -0.99
BRCA1-230ENST00000634433 ATRNO75882 1429 aa8.9□□□□□ -0.99
BRCA1-230ENST00000634433 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 FKBP5Q13451 457 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-230ENST00000634433 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 LMO7Q8WWI1 1683 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 CAMTA1Q9Y6Y1 1673 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 SLC4A10Q6U841 1118 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 G2E3Q7L622 706 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 SIRT2Q8IXJ6 389 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 LNPKQ9C0E8 428 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 CPDO75976 1380 aa8.89□□□□□ -0.99
BRCA1-230ENST00000634433 VIRMAQ69YN4 1812 aaKnown RBP8.88□□□□□ -0.99
BRCA1-230ENST00000634433 PXDNQ92626 1479 aa8.88□□□□□ -0.99
BRCA1-230ENST00000634433 GNAI2P04899 355 aa8.88□□□□□ -0.99
BRCA1-230ENST00000634433 CC2D2BQ6DHV5 1058 aa8.88□□□□□ -0.99
BRCA1-230ENST00000634433 MPRIPQ6WCQ1 1025 aa8.88□□□□□ -0.99
BRCA1-230ENST00000634433 TRPC5Q9UL62 973 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-230ENST00000634433 HSP90AB1P08238 724 aaKnown RBP8.88□□□□□ -0.99
BRCA1-230ENST00000634433 CEP85Q6P2H3 762 aa8.88□□□□□ -0.99
BRCA1-230ENST00000634433 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
BRCA1-230ENST00000634433 BRD1O95696 1058 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 BMP2KLQ5H9B9 411 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 FAM117AQ9C073 453 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 PXDNLA1KZ92 1463 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 RGPD2P0DJD1 1756 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 BECN1Q14457 450 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 IFNL2Q8IZJ0 200 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 MEIS3Q99687 375 aa8.87□□□□□ -0.99
BRCA1-230ENST00000634433 SOS2Q07890 1332 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-230ENST00000634433 NUTM2BA6NNL0 878 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-230ENST00000634433 NUTM2EB1AL46 878 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-230ENST00000634433 F6X3S4 739 aa8.86□□□□□ -0.99
BRCA1-230ENST00000634433 EIF2S2P20042 333 aaKnown RBP8.86□□□□□ -0.99
BRCA1-230ENST00000634433 NUTM2AQ8IVF1 878 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-230ENST00000634433 FNBP4Q8N3X1 1017 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-230ENST00000634433 DBF4Q9UBU7 674 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-230ENST00000634433 HDAC5Q9UQL6 1122 aa8.86□□□□□ -0.99
BRCA1-230ENST00000634433 FAM208AQ9UK61 1670 aaKnown RBP8.85□□□□□ -0.99
BRCA1-230ENST00000634433 PROM2Q8N271 834 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 CABLES1Q8TDN4 633 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 TBC1D32Q96NH3 1257 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 CARNS1A5YM72 827 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 SEC24BO95487 1268 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 PHKG2P15735 406 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 TEX2Q8IWB9 1127 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 KDM3BQ7LBC6 1761 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 ATP10DQ9P241 1426 aa8.85□□□□□ -0.99
BRCA1-230ENST00000634433 COL18A1P39060 1754 aa8.84□□□□□ -0.99
BRCA1-230ENST00000634433 GIGYF1O75420 1035 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-230ENST00000634433 ATP8B2P98198 1209 aa8.84□□□□□ -0.99
BRCA1-230ENST00000634433 CHRNA2Q15822 529 aa8.84□□□□□ -0.99
BRCA1-230ENST00000634433 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
BRCA1-230ENST00000634433 SLC52A2Q9HAB3 445 aa8.84□□□□□ -0.99
BRCA1-230ENST00000634433 HYPKQ9NX55 129 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms