RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 ANXA1P04083 346 aa18.24■□□□□ 0.51
PHACTR4-209ENST00000633371 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
PHACTR4-209ENST00000633371 LRP10Q7Z4F1 713 aa18.24■□□□□ 0.51
PHACTR4-209ENST00000633371 CHPF2Q9P2E5 772 aa18.24■□□□□ 0.51
PHACTR4-209ENST00000633371 RREB1Q92766 1687 aa18.24■□□□□ 0.51
PHACTR4-209ENST00000633371 TRIM37O94972 964 aa18.23■□□□□ 0.51
PHACTR4-209ENST00000633371 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
PHACTR4-209ENST00000633371 ITPK1Q13572 414 aa18.23■□□□□ 0.51
PHACTR4-209ENST00000633371 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
PHACTR4-209ENST00000633371 LOC102724428A0A0B4J2F2 783 aa18.22■□□□□ 0.51
PHACTR4-209ENST00000633371 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
PHACTR4-209ENST00000633371 RLBP1P12271 317 aa18.22■□□□□ 0.51
PHACTR4-209ENST00000633371 SIK1P57059 783 aa18.22■□□□□ 0.51
PHACTR4-209ENST00000633371 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
PHACTR4-209ENST00000633371 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
PHACTR4-209ENST00000633371 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
PHACTR4-209ENST00000633371 A1BGP04217 495 aa18.21■□□□□ 0.51
PHACTR4-209ENST00000633371 CYP19A1P11511 503 aaPredicted RBP18.21■□□□□ 0.51
PHACTR4-209ENST00000633371 PIP4K2AP48426 406 aaPredicted RBP18.21■□□□□ 0.51
PHACTR4-209ENST00000633371 FRAT1Q92837 279 aaPredicted RBP18.21■□□□□ 0.51
PHACTR4-209ENST00000633371 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
PHACTR4-209ENST00000633371 TRIM27P14373 513 aa18.2■□□□□ 0.5
PHACTR4-209ENST00000633371 DDX21Q9NR30 783 aaKnown RBP eCLIP18.2■□□□□ 0.5
PHACTR4-209ENST00000633371 KCNQ4P56696 695 aa18.19■□□□□ 0.5
PHACTR4-209ENST00000633371 ZKSCAN2Q63HK3 967 aa18.19■□□□□ 0.5
PHACTR4-209ENST00000633371 ARHGAP45Q92619 1136 aa18.19■□□□□ 0.5
PHACTR4-209ENST00000633371 STK31Q9BXU1 1019 aa18.19■□□□□ 0.5
PHACTR4-209ENST00000633371 DBF4Q9UBU7 674 aaPredicted RBP18.19■□□□□ 0.5
PHACTR4-209ENST00000633371 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
PHACTR4-209ENST00000633371 KIF16BQ96L93 1317 aa18.19■□□□□ 0.5
PHACTR4-209ENST00000633371 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
PHACTR4-209ENST00000633371 PANK1Q8TE04 598 aa18.18■□□□□ 0.5
PHACTR4-209ENST00000633371 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
PHACTR4-209ENST00000633371 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
PHACTR4-209ENST00000633371 FLIIQ13045 1269 aa18.17■□□□□ 0.5
PHACTR4-209ENST00000633371 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.17■□□□□ 0.5
PHACTR4-209ENST00000633371 ERBB4Q15303 1308 aa18.17■□□□□ 0.5
PHACTR4-209ENST00000633371 EP400Q96L91 3159 aa18.16■□□□□ 0.5
PHACTR4-209ENST00000633371 NUP188Q5SRE5 1749 aa18.16■□□□□ 0.5
PHACTR4-209ENST00000633371 PDE3AQ14432 1141 aa18.16■□□□□ 0.5
PHACTR4-209ENST00000633371 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
PHACTR4-209ENST00000633371 PROM2Q8N271 834 aa18.16■□□□□ 0.5
PHACTR4-209ENST00000633371 LINC00116Q8NCU8 138 aa18.16■□□□□ 0.5
PHACTR4-209ENST00000633371 CLUAP1Q96AJ1 413 aa18.16■□□□□ 0.5
PHACTR4-209ENST00000633371 MYL6BP14649 208 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 FKBP8Q14318 412 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 CHMP4AQ9BY43 222 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 LRRC4BQ9NT99 713 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 ABCC4O15439 1325 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 PTPRCP08575 1304 aa18.15■□□□□ 0.5
PHACTR4-209ENST00000633371 RGPD3A6NKT7 1758 aaPredicted RBP18.14■□□□□ 0.5
PHACTR4-209ENST00000633371 RGPD4Q7Z3J3 1758 aa18.14■□□□□ 0.5
PHACTR4-209ENST00000633371 IPO8O15397 1037 aaKnown RBP18.14■□□□□ 0.49
PHACTR4-209ENST00000633371 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
PHACTR4-209ENST00000633371 ADCY9O60503 1353 aa18.14■□□□□ 0.49
PHACTR4-209ENST00000633371 ARFGEF2Q9Y6D5 1785 aa18.14■□□□□ 0.49
PHACTR4-209ENST00000633371 F6X3S4 739 aa18.13■□□□□ 0.49
PHACTR4-209ENST00000633371 STARD3NLO95772 234 aa18.13■□□□□ 0.49
PHACTR4-209ENST00000633371 DZIP1LQ8IYY4 767 aaKnown RBP18.13■□□□□ 0.49
PHACTR4-209ENST00000633371 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
PHACTR4-209ENST00000633371 API5Q9BZZ5 524 aaKnown RBP18.13■□□□□ 0.49
PHACTR4-209ENST00000633371 ZBTB1Q9Y2K1 713 aa18.13■□□□□ 0.49
PHACTR4-209ENST00000633371 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
PHACTR4-209ENST00000633371 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
PHACTR4-209ENST00000633371 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
PHACTR4-209ENST00000633371 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
PHACTR4-209ENST00000633371 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
PHACTR4-209ENST00000633371 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
PHACTR4-209ENST00000633371 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
PHACTR4-209ENST00000633371 PLSCR1O15162 318 aa18.11■□□□□ 0.49
PHACTR4-209ENST00000633371 TTLL7Q6ZT98 887 aa18.11■□□□□ 0.49
PHACTR4-209ENST00000633371 CCDC87Q9NVE4 849 aa18.11■□□□□ 0.49
PHACTR4-209ENST00000633371 COG6Q9Y2V7 657 aa18.11■□□□□ 0.49
PHACTR4-209ENST00000633371 NUP98P52948 1817 aa18.11■□□□□ 0.49
PHACTR4-209ENST00000633371 UBR3Q6ZT12 1888 aa18.11■□□□□ 0.49
PHACTR4-209ENST00000633371 APBA3O96018 575 aa18.1■□□□□ 0.49
PHACTR4-209ENST00000633371 FKBP5Q13451 457 aaPredicted RBP18.1■□□□□ 0.49
PHACTR4-209ENST00000633371 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
PHACTR4-209ENST00000633371 PI4KAP2A4QPH2 592 aa18.09■□□□□ 0.49
PHACTR4-209ENST00000633371 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
PHACTR4-209ENST00000633371 AIMP1Q12904 312 aaKnown RBP18.09■□□□□ 0.49
PHACTR4-209ENST00000633371 INTS3Q68E01 1043 aaKnown RBP18.09■□□□□ 0.49
PHACTR4-209ENST00000633371 PI4KAP1Q8N8J0 262 aa18.09■□□□□ 0.49
PHACTR4-209ENST00000633371 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
PHACTR4-209ENST00000633371 NEFLP07196 543 aa18.08■□□□□ 0.48
PHACTR4-209ENST00000633371 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
PHACTR4-209ENST00000633371 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
PHACTR4-209ENST00000633371 KSR2Q6VAB6 950 aa18.08■□□□□ 0.48
PHACTR4-209ENST00000633371 AMIGO3Q86WK7 504 aa18.08■□□□□ 0.48
PHACTR4-209ENST00000633371 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
PHACTR4-209ENST00000633371 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
PHACTR4-209ENST00000633371 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
PHACTR4-209ENST00000633371 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
PHACTR4-209ENST00000633371 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
PHACTR4-209ENST00000633371 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
PHACTR4-209ENST00000633371 MS4A1P11836 297 aa18.06■□□□□ 0.48
PHACTR4-209ENST00000633371 SLC27A3Q5K4L6 730 aa18.06■□□□□ 0.48
PHACTR4-209ENST00000633371 FTSJ3Q8IY81 847 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms