RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 C10orf71Q711Q0 1435 aa12.07□□□□□ -0.48
PKP4-218ENST00000629219 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
PKP4-218ENST00000629219 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
PKP4-218ENST00000629219 KDM3BQ7LBC6 1761 aa12.06□□□□□ -0.48
PKP4-218ENST00000629219 STARD3NLO95772 234 aa12.06□□□□□ -0.48
PKP4-218ENST00000629219 SLC39A6Q13433 755 aa12.06□□□□□ -0.48
PKP4-218ENST00000629219 DNAJC10Q8IXB1 793 aa12.06□□□□□ -0.48
PKP4-218ENST00000629219 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
PKP4-218ENST00000629219 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
PKP4-218ENST00000629219 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
PKP4-218ENST00000629219 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
PKP4-218ENST00000629219 ADCY9O60503 1353 aa12.05□□□□□ -0.48
PKP4-218ENST00000629219 MMP10P09238 476 aa12.05□□□□□ -0.48
PKP4-218ENST00000629219 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
PKP4-218ENST00000629219 SCN7AQ01118 1682 aa12.05□□□□□ -0.48
PKP4-218ENST00000629219 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
PKP4-218ENST00000629219 COL15A1P39059 1388 aa12.05□□□□□ -0.48
PKP4-218ENST00000629219 HSPA6P17066 643 aa12.04□□□□□ -0.48
PKP4-218ENST00000629219 TGFB2P61812 414 aa12.04□□□□□ -0.48
PKP4-218ENST00000629219 ZNF496Q96IT1 587 aaPredicted RBP12.04□□□□□ -0.48
PKP4-218ENST00000629219 A0A087WZG4 1122 aa12.03□□□□□ -0.48
PKP4-218ENST00000629219 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
PKP4-218ENST00000629219 RGL2O15211 777 aa12.03□□□□□ -0.48
PKP4-218ENST00000629219 IL6STP40189 918 aaPredicted RBP12.03□□□□□ -0.48
PKP4-218ENST00000629219 EIF5P55010 431 aaKnown RBP12.03□□□□□ -0.48
PKP4-218ENST00000629219 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
PKP4-218ENST00000629219 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
PKP4-218ENST00000629219 NARFQ9UHQ1 456 aa12.03□□□□□ -0.48
PKP4-218ENST00000629219 BCORQ6W2J9 1755 aa12.02□□□□□ -0.48
PKP4-218ENST00000629219 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.48
PKP4-218ENST00000629219 ARFGEF1Q9Y6D6 1849 aa12.02□□□□□ -0.48
PKP4-218ENST00000629219 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
PKP4-218ENST00000629219 ZBTB1Q9Y2K1 713 aa12.02□□□□□ -0.49
PKP4-218ENST00000629219 AFDNP55196 1824 aaKnown RBP12.02□□□□□ -0.49
PKP4-218ENST00000629219 KIF3CO14782 793 aa12.01□□□□□ -0.49
PKP4-218ENST00000629219 ZPR1O75312 459 aa12.01□□□□□ -0.49
PKP4-218ENST00000629219 TM4SF1P30408 202 aa12.01□□□□□ -0.49
PKP4-218ENST00000629219 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
PKP4-218ENST00000629219 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
PKP4-218ENST00000629219 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
PKP4-218ENST00000629219 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
PKP4-218ENST00000629219 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
PKP4-218ENST00000629219 SNRPA1P09661 255 aaKnown RBP12□□□□□ -0.49
PKP4-218ENST00000629219 FKBP8Q14318 412 aa12□□□□□ -0.49
PKP4-218ENST00000629219 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
PKP4-218ENST00000629219 N4BP2Q86UW6 1770 aaPredicted RBP12□□□□□ -0.49
PKP4-218ENST00000629219 POLRMTO00411 1230 aaKnown RBP11.99□□□□□ -0.49
PKP4-218ENST00000629219 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
PKP4-218ENST00000629219 MCM10Q7L590 875 aa11.99□□□□□ -0.49
PKP4-218ENST00000629219 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
PKP4-218ENST00000629219 DDR1Q08345 913 aa11.98□□□□□ -0.49
PKP4-218ENST00000629219 USPL1Q5W0Q7 1092 aa11.98□□□□□ -0.49
PKP4-218ENST00000629219 DNAJC5GQ8N7S2 189 aa11.97□□□□□ -0.49
PKP4-218ENST00000629219 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
PKP4-218ENST00000629219 PDZRN3Q9UPQ7 1066 aa11.97□□□□□ -0.49
PKP4-218ENST00000629219 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
PKP4-218ENST00000629219 KCNQ3O43525 872 aa11.96□□□□□ -0.49
PKP4-218ENST00000629219 CANXP27824 592 aaKnown RBP11.96□□□□□ -0.49
PKP4-218ENST00000629219 DCTN1Q14203 1278 aa11.96□□□□□ -0.49
PKP4-218ENST00000629219 NFIXQ14938 502 aa11.96□□□□□ -0.49
PKP4-218ENST00000629219 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.49
PKP4-218ENST00000629219 TMPOP42166 694 aaKnown RBP11.95□□□□□ -0.5
PKP4-218ENST00000629219 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
PKP4-218ENST00000629219 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
PKP4-218ENST00000629219 PCNTO95613 3336 aa11.94□□□□□ -0.5
PKP4-218ENST00000629219 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
PKP4-218ENST00000629219 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
PKP4-218ENST00000629219 CAMTA2O94983 1202 aa11.94□□□□□ -0.5
PKP4-218ENST00000629219 A1BGP04217 495 aa11.94□□□□□ -0.5
PKP4-218ENST00000629219 KCNA3P22001 575 aa11.94□□□□□ -0.5
PKP4-218ENST00000629219 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
PKP4-218ENST00000629219 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
PKP4-218ENST00000629219 USP16Q9Y5T5 823 aa11.94□□□□□ -0.5
PKP4-218ENST00000629219 A0A0G2JLW4 131 aa11.93□□□□□ -0.5
PKP4-218ENST00000629219 SERPINB2P05120 415 aa11.93□□□□□ -0.5
PKP4-218ENST00000629219 DPEP1P16444 411 aa11.93□□□□□ -0.5
PKP4-218ENST00000629219 RIPK4P57078 832 aa11.93□□□□□ -0.5
PKP4-218ENST00000629219 HTRA3P83110 453 aa11.93□□□□□ -0.5
PKP4-218ENST00000629219 PIM2Q9P1W9 311 aa11.93□□□□□ -0.5
PKP4-218ENST00000629219 ZNF652Q9Y2D9 606 aa11.93□□□□□ -0.5
PKP4-218ENST00000629219 ARFGEF2Q9Y6D5 1785 aa11.92□□□□□ -0.5
PKP4-218ENST00000629219 DZIP3Q86Y13 1208 aaKnown RBP11.92□□□□□ -0.5
PKP4-218ENST00000629219 NMRK2Q9NPI5 230 aa11.92□□□□□ -0.5
PKP4-218ENST00000629219 NUP98P52948 1817 aa11.91□□□□□ -0.5
PKP4-218ENST00000629219 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
PKP4-218ENST00000629219 APLP1P51693 650 aa11.91□□□□□ -0.5
PKP4-218ENST00000629219 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
PKP4-218ENST00000629219 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
PKP4-218ENST00000629219 ADAMTS8Q9UP79 889 aa11.91□□□□□ -0.5
PKP4-218ENST00000629219 IBTKQ9P2D0 1353 aaPredicted RBP11.91□□□□□ -0.5
PKP4-218ENST00000629219 PRAMEF22A3QJZ6 481 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 TOMM70O94826 608 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
PKP4-218ENST00000629219 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
PKP4-218ENST00000629219 TBC1D9BQ66K14 1250 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 SETDB2Q96T68 719 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 BRIP1Q9BX63 1249 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
PKP4-218ENST00000629219 TBC1D2BQ9UPU7 963 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms