RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 IDH1O75874 414 aaKnown RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 KIAA1524Q8TCG1 905 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.01□□□□□ -1.134e-8■■■□□ 19.2
CHD2-208ENST00000626874 EHBP1L1Q8N3D4 1523 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 CA8P35219 290 aa8□□□□□ -1.13
CHD2-208ENST00000626874 VTI1AQ96AJ9 217 aa8□□□□□ -1.13
CHD2-208ENST00000626874 RFC4P35249 363 aa8□□□□□ -1.13
CHD2-208ENST00000626874 CADPS2Q86UW7 1296 aa8□□□□□ -1.13
CHD2-208ENST00000626874 LRRFIP2Q9Y608 721 aaKnown RBP8□□□□□ -1.13
CHD2-208ENST00000626874 CHMP4BP1P59074 171 aa8□□□□□ -1.13
CHD2-208ENST00000626874 BMS1Q14692 1282 aaKnown RBP8□□□□□ -1.13
CHD2-208ENST00000626874 SMARCC1Q92922 1105 aaPredicted RBP8□□□□□ -1.13
CHD2-208ENST00000626874 BCL11BQ9C0K0 894 aaPredicted RBP8□□□□□ -1.13
CHD2-208ENST00000626874 TCP11L1Q9NUJ3 509 aa8□□□□□ -1.13
CHD2-208ENST00000626874 HYPKQ9NX55 129 aa8□□□□□ -1.13
CHD2-208ENST00000626874 STX6O43752 255 aa8□□□□□ -1.13
CHD2-208ENST00000626874 PRPF31Q8WWY3 499 aaKnown RBP8□□□□□ -1.13
CHD2-208ENST00000626874 PLEKHH1Q9ULM0 1364 aa8□□□□□ -1.13
CHD2-208ENST00000626874 LARP1BQ659C4 914 aaKnown RBP8□□□□□ -1.13
CHD2-208ENST00000626874 SULT6B1Q6IMI4 303 aa8□□□□□ -1.13
CHD2-208ENST00000626874 CNGA1P29973 690 aa8□□□□□ -1.13
CHD2-208ENST00000626874 POLR3GO15318 223 aaPredicted RBP7.99□□□□□ -1.13
CHD2-208ENST00000626874 NFE2L2Q16236 605 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 ARHGAP29Q52LW3 1261 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 PRG4Q92954 1404 aaPredicted RBP7.99□□□□□ -1.13
CHD2-208ENST00000626874 FSD2A1L4K1 749 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 PRPHP41219 470 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 KANK3Q6NY19 840 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
CHD2-208ENST00000626874 IKBKGQ9Y6K9 419 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 CCDC194A0A1B0GVG4 234 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 TAF12Q16514 161 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 FGD6Q6ZV73 1430 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 SKIDA1Q1XH10 827 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 BICDL1Q6ZP65 573 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 ZSCAN12O43309 604 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 KIF1BPQ96EK5 621 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 CENPHQ9H3R5 247 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 MSH6P52701 1360 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 GLRX3O76003 335 aaKnown RBP7.99□□□□□ -1.13
CHD2-208ENST00000626874 GABPB2Q8TAK5 448 aaPredicted RBP7.99□□□□□ -1.13
CHD2-208ENST00000626874 NYXQ9GZU5 481 aa7.99□□□□□ -1.13
CHD2-208ENST00000626874 CCDC61Q9Y6R9 512 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 CTAGE5O15320 804 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 SRGAP3O43295 1099 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 TNNI2P48788 182 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 C6orf163Q5TEZ5 329 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 IMPG2Q9BZV3 1241 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 C6orf229H3BNL8 230 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 FCHSD2O94868 740 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 BMP15O95972 392 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 GAS8O95995 478 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 SSFA2P28290 1259 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 SYCP3Q8IZU3 236 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 TBC1D5Q92609 795 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 CRACR2AQ9BSW2 395 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 C11orf95C9JLR9 678 aaPredicted RBP7.98□□□□□ -1.13
CHD2-208ENST00000626874 LMAN1P49257 510 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 UPF3BQ9BZI7 483 aaKnown RBP7.98□□□□□ -1.13
CHD2-208ENST00000626874 GOLIM4O00461 696 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 PAFAH1B1P43034 410 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 NFKBIBQ15653 356 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 CLEC11AQ9Y240 323 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 LPXNO60711 386 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 ALS2CR12Q96Q35 445 aa7.98□□□□□ -1.13
CHD2-208ENST00000626874 MVPQ14764 893 aaKnown RBP7.97□□□□□ -1.13
CHD2-208ENST00000626874 CEP135Q66GS9 1140 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 SYNCQ9H7C4 482 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 PLCG2P16885 1265 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 CASKIN1Q8WXD9 1431 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 FAM107BQ9H098 131 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 PDRG1Q9NUG6 133 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 SLC12A7Q9Y666 1083 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 ZWINTO95229 277 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 GNAQP50148 359 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 RPAP2Q8IXW5 612 aaPredicted RBP7.97□□□□□ -1.13
CHD2-208ENST00000626874 C9orf84Q5VXU9 1444 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 ARHGEF6Q15052 776 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 JDP2Q8WYK2 163 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 SIL1Q9H173 461 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 SNX16P57768 344 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 LUZP1Q86V48 1076 aa7.97□□□□□ -1.13
CHD2-208ENST00000626874 MICALCLQ6ZW33 695 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 FILIP1Q7Z7B0 1213 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 EHBP1Q8NDI1 1231 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 CRNKL1Q9BZJ0 848 aaKnown RBP7.96□□□□□ -1.13
CHD2-208ENST00000626874 SH2B1Q9NRF2 756 aaPredicted RBP7.96□□□□□ -1.13
CHD2-208ENST00000626874 TMOD4Q9NZQ9 345 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 SAMM50Q9Y512 469 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 KIF5CO60282 957 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 SSRP1Q08945 709 aaKnown RBP7.96□□□□□ -1.13
CHD2-208ENST00000626874 PDCL2Q8N4E4 241 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 FIBPO43427 364 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 TBCAO75347 108 aaKnown RBP7.96□□□□□ -1.13
CHD2-208ENST00000626874 CCDC152Q4G0S7 254 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 BICD1Q96G01 975 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 SH2D4AQ9H788 454 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 CEP83Q9Y592 693 aa7.96□□□□□ -1.13
CHD2-208ENST00000626874 IFFO1Q0D2I5 559 aa7.96□□□□□ -1.14
CHD2-208ENST00000626874 TCP11L2Q8N4U5 519 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms