RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 QSER1Q2KHR3 1735 aa25.65■■□□□ 1.7
PDLIM2-221ENST00000622702 TJP1Q07157 1748 aa25.65■■□□□ 1.7
PDLIM2-221ENST00000622702 KRT24Q2M2I5 525 aa25.64■■□□□ 1.69
PDLIM2-221ENST00000622702 VSIG10Q8N0Z9 540 aa25.64■■□□□ 1.69
PDLIM2-221ENST00000622702 C8orf58Q8NAV2 365 aa25.64■■□□□ 1.69
PDLIM2-221ENST00000622702 SOS1Q07889 1333 aaPredicted RBP25.64■■□□□ 1.69
PDLIM2-221ENST00000622702 PNPLA7Q6ZV29 1317 aa25.64■■□□□ 1.69
PDLIM2-221ENST00000622702 GIGYF1O75420 1035 aaPredicted RBP25.63■■□□□ 1.69
PDLIM2-221ENST00000622702 CICQ96RK0 1608 aaPredicted RBP25.62■■□□□ 1.69
PDLIM2-221ENST00000622702 HOXB7P09629 217 aa25.62■■□□□ 1.69
PDLIM2-221ENST00000622702 SNRPA1P09661 255 aaKnown RBP25.62■■□□□ 1.69
PDLIM2-221ENST00000622702 DNAJC10Q8IXB1 793 aa25.61■■□□□ 1.69
PDLIM2-221ENST00000622702 TSPYL6Q8N831 410 aa25.61■■□□□ 1.69
PDLIM2-221ENST00000622702 CT47B1P0C2W7 299 aaPredicted RBP25.6■■□□□ 1.69
PDLIM2-221ENST00000622702 TWISTNBQ3B726 338 aaPredicted RBP25.6■■□□□ 1.69
PDLIM2-221ENST00000622702 UBR3Q6ZT12 1888 aa25.6■■□□□ 1.69
PDLIM2-221ENST00000622702 ELL2O00472 640 aaPredicted RBP25.59■■□□□ 1.69
PDLIM2-221ENST00000622702 GNPATO15228 680 aa25.59■■□□□ 1.69
PDLIM2-221ENST00000622702 ZBTB7AO95365 584 aa25.59■■□□□ 1.69
PDLIM2-221ENST00000622702 RC3H1Q5TC82 1133 aaKnown RBP25.59■■□□□ 1.69
PDLIM2-221ENST00000622702 AMIGO3Q86WK7 504 aa25.59■■□□□ 1.69
PDLIM2-221ENST00000622702 MSH5O43196 834 aa25.58■■□□□ 1.69
PDLIM2-221ENST00000622702 VAMP4O75379 141 aa25.58■■□□□ 1.69
PDLIM2-221ENST00000622702 SMIM5Q71RC9 77 aa25.58■■□□□ 1.69
PDLIM2-221ENST00000622702 COL23A1Q86Y22 540 aaPredicted RBP25.58■■□□□ 1.69
PDLIM2-221ENST00000622702 TEX13AQ9BXU3 409 aaPredicted RBP25.58■■□□□ 1.69
PDLIM2-221ENST00000622702 CNTNAP4Q9C0A0 1308 aa25.58■■□□□ 1.69
PDLIM2-221ENST00000622702 PHF14O94880 888 aa25.57■■□□□ 1.68
PDLIM2-221ENST00000622702 MYH14Q7Z406 1995 aaKnown RBP25.57■■□□□ 1.68
PDLIM2-221ENST00000622702 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
PDLIM2-221ENST00000622702 PRAMEF22A3QJZ6 481 aa25.56■■□□□ 1.68
PDLIM2-221ENST00000622702 CRKLP46109 303 aaKnown RBP25.56■■□□□ 1.68
PDLIM2-221ENST00000622702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.55■■□□□ 1.68
PDLIM2-221ENST00000622702 CYP19A1P11511 503 aaPredicted RBP25.55■■□□□ 1.68
PDLIM2-221ENST00000622702 SSFA2P28290 1259 aa25.55■■□□□ 1.68
PDLIM2-221ENST00000622702 ZNF428Q96B54 188 aa25.55■■□□□ 1.68
PDLIM2-221ENST00000622702 CHMP4AQ9BY43 222 aa25.55■■□□□ 1.68
PDLIM2-221ENST00000622702 RTCBQ9Y3I0 505 aaKnown RBP25.55■■□□□ 1.68
PDLIM2-221ENST00000622702 SPON1Q9HCB6 807 aa25.54■■□□□ 1.68
PDLIM2-221ENST00000622702 ATF5Q9Y2D1 282 aaPredicted RBP25.54■■□□□ 1.68
PDLIM2-221ENST00000622702 LAMB4A4D0S4 1761 aa25.54■■□□□ 1.68
PDLIM2-221ENST00000622702 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 SLC16A10Q8TF71 515 aa25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 MTFR1LQ9H019 292 aa25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 USP16Q9Y5T5 823 aa25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 LRP5O75197 1615 aa25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 RPS6KA4O75676 772 aa25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 STARD3NLO95772 234 aa25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 CCDC87Q9NVE4 849 aa25.53■■□□□ 1.68
PDLIM2-221ENST00000622702 HDGFL1Q5TGJ6 251 aa25.52■■□□□ 1.68
PDLIM2-221ENST00000622702 TRAPPC3LQ5T215 181 aa25.51■■□□□ 1.67
PDLIM2-221ENST00000622702 EIF2S2P20042 333 aaKnown RBP25.5■■□□□ 1.67
PDLIM2-221ENST00000622702 CCDC30Q5VVM6 783 aa25.5■■□□□ 1.67
PDLIM2-221ENST00000622702 ERBB4Q15303 1308 aa25.49■■□□□ 1.67
PDLIM2-221ENST00000622702 ADRA2BP18089 450 aa25.47■■□□□ 1.67
PDLIM2-221ENST00000622702 ALDH1L2Q3SY69 923 aa25.47■■□□□ 1.67
PDLIM2-221ENST00000622702 ARHGEF1Q92888 912 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-221ENST00000622702 ZBTB1Q9Y2K1 713 aa25.47■■□□□ 1.67
PDLIM2-221ENST00000622702 RARSP54136 660 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-221ENST00000622702 CANXP27824 592 aaKnown RBP25.46■■□□□ 1.67
PDLIM2-221ENST00000622702 PTGER2P43116 358 aa25.46■■□□□ 1.67
PDLIM2-221ENST00000622702 NECTIN2Q92692 538 aa25.46■■□□□ 1.67
PDLIM2-221ENST00000622702 RFC4P35249 363 aa25.45■■□□□ 1.66
PDLIM2-221ENST00000622702 MSL1Q68DK7 614 aa25.45■■□□□ 1.66
PDLIM2-221ENST00000622702 SSH1Q8WYL5 1049 aa25.45■■□□□ 1.66
PDLIM2-221ENST00000622702 DBF4Q9UBU7 674 aaPredicted RBP25.45■■□□□ 1.66
PDLIM2-221ENST00000622702 RCAN3Q9UKA8 241 aa25.45■■□□□ 1.66
PDLIM2-221ENST00000622702 A1BGP04217 495 aa25.44■■□□□ 1.66
PDLIM2-221ENST00000622702 PDIA6Q15084 440 aa25.44■■□□□ 1.66
PDLIM2-221ENST00000622702 STK31Q9BXU1 1019 aa25.44■■□□□ 1.66
PDLIM2-221ENST00000622702 DDX21Q9NR30 783 aaKnown RBP eCLIP25.44■■□□□ 1.66
PDLIM2-221ENST00000622702 CHPF2Q9P2E5 772 aa25.44■■□□□ 1.66
PDLIM2-221ENST00000622702 C4AP0C0L4 1744 aa25.44■■□□□ 1.66
PDLIM2-221ENST00000622702 CENPBP07199 599 aaPredicted RBP25.43■■□□□ 1.66
PDLIM2-221ENST00000622702 SGIP1Q9BQI5 828 aa25.43■■□□□ 1.66
PDLIM2-221ENST00000622702 COL24A1Q17RW2 1714 aa25.43■■□□□ 1.66
PDLIM2-221ENST00000622702 CACNA1FO60840 1977 aa25.42■■□□□ 1.66
PDLIM2-221ENST00000622702 NBPF26B4DH59 902 aa25.42■■□□□ 1.66
PDLIM2-221ENST00000622702 BRPF1P55201 1214 aaPredicted RBP25.42■■□□□ 1.66
PDLIM2-221ENST00000622702 NBPF10Q6P3W6 841 aaKnown RBP25.42■■□□□ 1.66
PDLIM2-221ENST00000622702 NBPF15Q8N660 670 aa25.42■■□□□ 1.66
PDLIM2-221ENST00000622702 PPP1R1BQ9UD71 204 aaPredicted RBP25.42■■□□□ 1.66
PDLIM2-221ENST00000622702 TCERG1O14776 1098 aaKnown RBP25.41■■□□□ 1.66
PDLIM2-221ENST00000622702 SMC4Q9NTJ3 1288 aa25.41■■□□□ 1.66
PDLIM2-221ENST00000622702 POLD1P28340 1107 aa25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 MRPL50Q8N5N7 158 aaKnown RBP25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 COL15A1P39059 1388 aa25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 SLC4A2P04920 1241 aa25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 EIF5P55010 431 aaKnown RBP25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 PROSER3Q2NL68 480 aa25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 LRP10Q7Z4F1 713 aa25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 HYPKQ9NX55 129 aa25.4■■□□□ 1.66
PDLIM2-221ENST00000622702 IL6STP40189 918 aaPredicted RBP25.39■■□□□ 1.65
PDLIM2-221ENST00000622702 PIP4K2AP48426 406 aaPredicted RBP25.39■■□□□ 1.65
PDLIM2-221ENST00000622702 BCL2L13Q9BXK5 485 aa25.39■■□□□ 1.65
PDLIM2-221ENST00000622702 ZNF330Q9Y3S2 320 aaPredicted RBP25.39■■□□□ 1.65
PDLIM2-221ENST00000622702 SRP68Q9UHB9 627 aaKnown RBP25.38■■□□□ 1.65
PDLIM2-221ENST00000622702 BCAR3O75815 825 aa25.37■■□□□ 1.65
PDLIM2-221ENST00000622702 ANXA1P04083 346 aa25.37■■□□□ 1.65
PDLIM2-221ENST00000622702 GYS1P13807 737 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms