RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 NECTIN2Q92692 538 aa21.48■■□□□ 1.03
TRA2A-212ENST00000621813 TMEM51Q9NW97 253 aa21.48■■□□□ 1.03
TRA2A-212ENST00000621813 FAM13BQ9NYF5 915 aa21.48■■□□□ 1.03
TRA2A-212ENST00000621813 ERBB3P21860 1342 aa21.48■■□□□ 1.03
TRA2A-212ENST00000621813 RNMTO43148 476 aaKnown RBP21.47■■□□□ 1.03
TRA2A-212ENST00000621813 PAXIP1Q6ZW49 1069 aaPredicted RBP21.47■■□□□ 1.03
TRA2A-212ENST00000621813 CADPS2Q86UW7 1296 aa21.47■■□□□ 1.03
TRA2A-212ENST00000621813 CCDC94Q9BW85 323 aaPredicted RBP21.47■■□□□ 1.03
TRA2A-212ENST00000621813 PXDNQ92626 1479 aa21.47■■□□□ 1.03
TRA2A-212ENST00000621813 CRYBG1Q9Y4K1 1723 aa21.47■■□□□ 1.03
TRA2A-212ENST00000621813 HSCBQ8IWL3 235 aa21.47■■□□□ 1.03
TRA2A-212ENST00000621813 CCDC173Q0VFZ6 552 aa21.46■■□□□ 1.03
TRA2A-212ENST00000621813 SNX21Q969T3 373 aa21.46■■□□□ 1.03
TRA2A-212ENST00000621813 NPHP3Q7Z494 1330 aa21.46■■□□□ 1.03
TRA2A-212ENST00000621813 AXIN2Q9Y2T1 843 aa21.45■■□□□ 1.02
TRA2A-212ENST00000621813 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
TRA2A-212ENST00000621813 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
TRA2A-212ENST00000621813 ANP32BQ92688 251 aaKnown RBP21.45■■□□□ 1.02
TRA2A-212ENST00000621813 OSBPL3Q9H4L5 887 aa21.45■■□□□ 1.02
TRA2A-212ENST00000621813 COL18A1P39060 1754 aa21.44■■□□□ 1.02
TRA2A-212ENST00000621813 STRCQ7RTU9 1775 aa21.44■■□□□ 1.02
TRA2A-212ENST00000621813 CASC1Q6TDU7 716 aa21.44■■□□□ 1.02
TRA2A-212ENST00000621813 ZSCAN20P17040 1043 aaPredicted RBP21.43■■□□□ 1.02
TRA2A-212ENST00000621813 SLKQ9H2G2 1235 aaPredicted RBP21.43■■□□□ 1.02
TRA2A-212ENST00000621813 TNS3Q68CZ2 1445 aa21.43■■□□□ 1.02
TRA2A-212ENST00000621813 C16orf71Q8IYS4 520 aaPredicted RBP21.43■■□□□ 1.02
TRA2A-212ENST00000621813 SCN11AQ9UI33 1791 aa21.42■■□□□ 1.02
TRA2A-212ENST00000621813 DDX11L8A8MPP1 907 aa21.42■■□□□ 1.02
TRA2A-212ENST00000621813 TRAK2O60296 914 aa21.42■■□□□ 1.02
TRA2A-212ENST00000621813 UBTFL1P0CB47 393 aaPredicted RBP21.42■■□□□ 1.02
TRA2A-212ENST00000621813 EIF2S2P20042 333 aaKnown RBP21.42■■□□□ 1.02
TRA2A-212ENST00000621813 MSNP26038 577 aaKnown RBP21.42■■□□□ 1.02
TRA2A-212ENST00000621813 SRCIN1Q9C0H9 1055 aa21.42■■□□□ 1.02
TRA2A-212ENST00000621813 PHAXQ9H814 394 aaKnown RBP21.42■■□□□ 1.02
TRA2A-212ENST00000621813 HS1BP3Q53T59 392 aa21.41■■□□□ 1.02
TRA2A-212ENST00000621813 USP44Q9H0E7 712 aa21.41■■□□□ 1.02
TRA2A-212ENST00000621813 DBF4Q9UBU7 674 aaPredicted RBP21.41■■□□□ 1.02
TRA2A-212ENST00000621813 HEG1Q9ULI3 1381 aa21.41■■□□□ 1.02
TRA2A-212ENST00000621813 SMARCA5O60264 1052 aaPredicted RBP21.41■■□□□ 1.02
TRA2A-212ENST00000621813 PPP1R9BQ96SB3 815 aa21.41■■□□□ 1.02
TRA2A-212ENST00000621813 LRRCC1Q9C099 1032 aa21.41■■□□□ 1.02
TRA2A-212ENST00000621813 CHPF2Q9P2E5 772 aa21.41■■□□□ 1.02
TRA2A-212ENST00000621813 ZC3H6P61129 1189 aaKnown RBP21.4■■□□□ 1.02
TRA2A-212ENST00000621813 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
TRA2A-212ENST00000621813 IBTKQ9P2D0 1353 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-212ENST00000621813 TUBGCP6Q96RT7 1819 aa21.4■■□□□ 1.02
TRA2A-212ENST00000621813 PTMSP20962 102 aa21.39■■□□□ 1.02
TRA2A-212ENST00000621813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.39■■□□□ 1.026e-10■■■■□ 23.3
TRA2A-212ENST00000621813 LRRFIP2Q9Y608 721 aaKnown RBP21.39■■□□□ 1.02
TRA2A-212ENST00000621813 APBB1O00213 710 aa21.39■■□□□ 1.01
TRA2A-212ENST00000621813 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.01
TRA2A-212ENST00000621813 TEX2Q8IWB9 1127 aa21.39■■□□□ 1.01
TRA2A-212ENST00000621813 OTUD7AQ8TE49 926 aaPredicted RBP21.39■■□□□ 1.01
TRA2A-212ENST00000621813 DNAAF4Q8WXU2 420 aa21.39■■□□□ 1.01
TRA2A-212ENST00000621813 XIRP1Q702N8 1843 aaKnown RBP21.38■■□□□ 1.01
TRA2A-212ENST00000621813 KCNQ3O43525 872 aa21.38■■□□□ 1.01
TRA2A-212ENST00000621813 SDSP20132 328 aa21.38■■□□□ 1.01
TRA2A-212ENST00000621813 BRD2P25440 801 aaKnown RBP21.38■■□□□ 1.01
TRA2A-212ENST00000621813 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
TRA2A-212ENST00000621813 PDE1AP54750 535 aa21.37■■□□□ 1.01
TRA2A-212ENST00000621813 PNMA6EA0A0J9YXQ4 647 aa21.37■■□□□ 1.01
TRA2A-212ENST00000621813 KIF2CQ99661 725 aa21.37■■□□□ 1.01
TRA2A-212ENST00000621813 CHMP5Q9NZZ3 219 aa21.37■■□□□ 1.01
TRA2A-212ENST00000621813 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
TRA2A-212ENST00000621813 EXOC6BQ9Y2D4 811 aa21.37■■□□□ 1.01
TRA2A-212ENST00000621813 TATP17735 454 aaPredicted RBP21.36■■□□□ 1.01
TRA2A-212ENST00000621813 SSH3Q8TE77 659 aa21.36■■□□□ 1.01
TRA2A-212ENST00000621813 CPDO75976 1380 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 PKD1L3Q7Z443 1732 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 UQCRHLA0A096LP55 91 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 UQCRHP07919 91 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 BEND3Q5T5X7 828 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 SALL3Q9BXA9 1300 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 PI4KAP1Q8N8J0 262 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 NLRP2Q9NX02 1062 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 HDAC5Q9UQL6 1122 aa21.35■■□□□ 1.01
TRA2A-212ENST00000621813 SPATA31A3Q5VYP0 1347 aa21.34■■□□□ 1.01
TRA2A-212ENST00000621813 RAB11FIP3O75154 756 aa21.34■■□□□ 1.01
TRA2A-212ENST00000621813 REC8O95072 547 aa21.33■■□□□ 1.01
TRA2A-212ENST00000621813 HYPKQ9NX55 129 aa21.33■■□□□ 1.01
TRA2A-212ENST00000621813 AOX1Q06278 1338 aa21.33■■□□□ 1.01
TRA2A-212ENST00000621813 ADCY9O60503 1353 aa21.33■■□□□ 1.01
TRA2A-212ENST00000621813 ZNF500O60304 480 aaPredicted RBP21.33■■□□□ 1
TRA2A-212ENST00000621813 CHRM1P11229 460 aaPredicted RBP21.33■■□□□ 1
TRA2A-212ENST00000621813 GZF1Q9H116 711 aaPredicted RBP21.33■■□□□ 1
TRA2A-212ENST00000621813 ALDH1L1O75891 902 aa21.32■■□□□ 1
TRA2A-212ENST00000621813 MX1P20591 662 aa21.32■■□□□ 1
TRA2A-212ENST00000621813 POLA2Q14181 598 aa21.32■■□□□ 1
TRA2A-212ENST00000621813 PRDM10Q9NQV6 1147 aa21.32■■□□□ 1
TRA2A-212ENST00000621813 CDK11BP21127 795 aaKnown RBP21.31■■□□□ 1
TRA2A-212ENST00000621813 RABEP1Q15276 862 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 USP26Q9BXU7 913 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 STAP2Q9UGK3 403 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 R3HCC1Q9Y3T6 440 aaKnown RBP21.31■■□□□ 1
TRA2A-212ENST00000621813 MRC1P22897 1456 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 MEGF6O75095 1541 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 HSP90AB1P08238 724 aaKnown RBP21.31■■□□□ 1
TRA2A-212ENST00000621813 PHKG2P15735 406 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 SKOR2Q2VWA4 1001 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms