RNA–Protein interactions for RNA: ENST00000619987.4

MESD-207, Transcript of mesoderm development LRP chaperone, humanhuman

TSL 1 (best)

Gene MESD, Length 3,978 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-207ENST00000619987 PPFIA3O75145 1194 aa13.21□□□□□ -0.3
MESD-207ENST00000619987 SEC24BO95487 1268 aa13.21□□□□□ -0.3
MESD-207ENST00000619987 LRRFIP1Q32MZ4 808 aaKnown RBP13.2□□□□□ -0.3
MESD-207ENST00000619987 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
MESD-207ENST00000619987 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
MESD-207ENST00000619987 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
MESD-207ENST00000619987 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
MESD-207ENST00000619987 TBC1D9Q6ZT07 1266 aa13.2□□□□□ -0.3
MESD-207ENST00000619987 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
MESD-207ENST00000619987 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
MESD-207ENST00000619987 NLRP1Q9C000 1473 aa13.19□□□□□ -0.3
MESD-207ENST00000619987 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
MESD-207ENST00000619987 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
MESD-207ENST00000619987 SIRT1Q96EB6 747 aa13.19□□□□□ -0.3
MESD-207ENST00000619987 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
MESD-207ENST00000619987 ARHGAP45Q92619 1136 aa13.19□□□□□ -0.3
MESD-207ENST00000619987 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
MESD-207ENST00000619987 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 IFIT5Q13325 482 aaKnown RBP13.18□□□□□ -0.3
MESD-207ENST00000619987 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
MESD-207ENST00000619987 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 GRM8O00222 908 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 ANKRD44Q8N8A2 993 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 DCAF5Q96JK2 942 aa13.18□□□□□ -0.3
MESD-207ENST00000619987 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
MESD-207ENST00000619987 MYO5BQ9ULV0 1848 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
MESD-207ENST00000619987 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
MESD-207ENST00000619987 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
MESD-207ENST00000619987 NBPF7P0C2Y1 421 aaPredicted RBP13.17□□□□□ -0.3
MESD-207ENST00000619987 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
MESD-207ENST00000619987 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 USP19O94966 1318 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 ZPR1O75312 459 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 CEP85Q6P2H3 762 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
MESD-207ENST00000619987 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
MESD-207ENST00000619987 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
MESD-207ENST00000619987 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
MESD-207ENST00000619987 CREBRFQ8IUR6 639 aa13.16□□□□□ -0.3
MESD-207ENST00000619987 NOL10Q9BSC4 688 aaKnown RBP13.16□□□□□ -0.3
MESD-207ENST00000619987 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
MESD-207ENST00000619987 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
MESD-207ENST00000619987 SDSP20132 328 aa13.16□□□□□ -0.3
MESD-207ENST00000619987 NUCB1Q02818 461 aa13.16□□□□□ -0.3
MESD-207ENST00000619987 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
MESD-207ENST00000619987 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
MESD-207ENST00000619987 BLMP54132 1417 aaPredicted RBP13.16□□□□□ -0.3
MESD-207ENST00000619987 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
MESD-207ENST00000619987 USP6P35125 1406 aa13.16□□□□□ -0.3
MESD-207ENST00000619987 HDAC1Q13547 482 aaPredicted RBP13.15□□□□□ -0.3
MESD-207ENST00000619987 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
MESD-207ENST00000619987 TCEANC2Q96MN5 208 aa13.15□□□□□ -0.3
MESD-207ENST00000619987 RABEP1Q15276 862 aa13.15□□□□□ -0.3
MESD-207ENST00000619987 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
MESD-207ENST00000619987 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
MESD-207ENST00000619987 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
MESD-207ENST00000619987 GOLIM4O00461 696 aa13.15□□□□□ -0.3
MESD-207ENST00000619987 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
MESD-207ENST00000619987 DTNBO60941 627 aa13.15□□□□□ -0.3
MESD-207ENST00000619987 IFIT1P09914 478 aaKnown RBP13.15□□□□□ -0.3
MESD-207ENST00000619987 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.3
MESD-207ENST00000619987 KCNQ4P56696 695 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 PPLO60437 1756 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 GSE1Q14687 1217 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 LINS1Q8NG48 757 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 RAI14Q9P0K7 980 aa13.14□□□□□ -0.31
MESD-207ENST00000619987 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
MESD-207ENST00000619987 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 FIBPO43427 364 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 PDE1AP54750 535 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
MESD-207ENST00000619987 TBC1D2Q9BYX2 928 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 NEURL4Q96JN8 1562 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
MESD-207ENST00000619987 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
MESD-207ENST00000619987 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 DDX21Q9NR30 783 aaKnown RBP eCLIP13.13□□□□□ -0.31
MESD-207ENST00000619987 FER1L4A9Z1Z3 1794 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
MESD-207ENST00000619987 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 NDUFB9Q9Y6M9 179 aa13.13□□□□□ -0.31
MESD-207ENST00000619987 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
MESD-207ENST00000619987 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
MESD-207ENST00000619987 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
MESD-207ENST00000619987 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms