RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ADAMTS7Q9UKP4 1686 aa27.73■■■□□ 2.03
SGMS1-210ENST00000619438 CCDC27Q2M243 656 aa27.72■■■□□ 2.03
SGMS1-210ENST00000619438 AMIGO3Q86WK7 504 aa27.72■■■□□ 2.03
SGMS1-210ENST00000619438 TRAPPC3LQ5T215 181 aa27.72■■■□□ 2.03
SGMS1-210ENST00000619438 WWC1Q8IX03 1113 aa27.72■■■□□ 2.03
SGMS1-210ENST00000619438 DNAJC10Q8IXB1 793 aa27.72■■■□□ 2.03
SGMS1-210ENST00000619438 COL24A1Q17RW2 1714 aa27.71■■■□□ 2.03
SGMS1-210ENST00000619438 CNTNAP4Q9C0A0 1308 aa27.7■■■□□ 2.03
SGMS1-210ENST00000619438 CRKLP46109 303 aaKnown RBP27.7■■■□□ 2.02
SGMS1-210ENST00000619438 RIPK4P57078 832 aa27.7■■■□□ 2.02
SGMS1-210ENST00000619438 VSIG10Q8N0Z9 540 aa27.7■■■□□ 2.02
SGMS1-210ENST00000619438 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.7■■■□□ 2.02
SGMS1-210ENST00000619438 COL5A3P25940 1745 aaPredicted RBP27.7■■■□□ 2.02
SGMS1-210ENST00000619438 MSL1Q68DK7 614 aa27.69■■■□□ 2.02
SGMS1-210ENST00000619438 ARXQ96QS3 562 aa27.69■■■□□ 2.02
SGMS1-210ENST00000619438 RPS6KA4O75676 772 aa27.68■■■□□ 2.02
SGMS1-210ENST00000619438 TAF7Q15545 349 aaPredicted RBP27.68■■■□□ 2.02
SGMS1-210ENST00000619438 ZNF496Q96IT1 587 aaPredicted RBP27.68■■■□□ 2.02
SGMS1-210ENST00000619438 SPINK5Q9NQ38 1064 aaPredicted RBP27.68■■■□□ 2.02
SGMS1-210ENST00000619438 NEUROD2Q15784 382 aa27.68■■■□□ 2.02
SGMS1-210ENST00000619438 FMNL2Q96PY5 1086 aa27.68■■■□□ 2.02
SGMS1-210ENST00000619438 WDR63Q8IWG1 891 aa27.67■■■□□ 2.02
SGMS1-210ENST00000619438 PLIN1O60240 522 aa27.66■■■□□ 2.02
SGMS1-210ENST00000619438 TMPOP42166 694 aaKnown RBP27.66■■■□□ 2.02
SGMS1-210ENST00000619438 FHDC1Q9C0D6 1143 aaPredicted RBP27.66■■■□□ 2.02
SGMS1-210ENST00000619438 KCNQ3O43525 872 aa27.65■■■□□ 2.02
SGMS1-210ENST00000619438 STARD3NLO95772 234 aa27.65■■■□□ 2.02
SGMS1-210ENST00000619438 RFC4P35249 363 aa27.65■■■□□ 2.02
SGMS1-210ENST00000619438 CYP19A1P11511 503 aaPredicted RBP27.65■■■□□ 2.02
SGMS1-210ENST00000619438 ARHGEF1Q92888 912 aaKnown RBP27.65■■■□□ 2.02
SGMS1-210ENST00000619438 TEX13AQ9BXU3 409 aaPredicted RBP27.65■■■□□ 2.02
SGMS1-210ENST00000619438 CCDC87Q9NVE4 849 aa27.65■■■□□ 2.02
SGMS1-210ENST00000619438 RRP7AQ9Y3A4 280 aaKnown RBP27.65■■■□□ 2.02
SGMS1-210ENST00000619438 TJP1Q07157 1748 aa27.64■■■□□ 2.02
SGMS1-210ENST00000619438 ADRA2BP18089 450 aa27.64■■■□□ 2.02
SGMS1-210ENST00000619438 THUMPD2Q9BTF0 503 aaKnown RBP27.64■■■□□ 2.02
SGMS1-210ENST00000619438 MIS18AQ9NYP9 233 aa27.64■■■□□ 2.02
SGMS1-210ENST00000619438 MYH14Q7Z406 1995 aaKnown RBP27.64■■■□□ 2.01
SGMS1-210ENST00000619438 LMOD3Q0VAK6 560 aa27.63■■■□□ 2.01
SGMS1-210ENST00000619438 INTS5Q6P9B9 1019 aaKnown RBP27.63■■■□□ 2.01
SGMS1-210ENST00000619438 CRBNQ96SW2 442 aa27.63■■■□□ 2.01
SGMS1-210ENST00000619438 KCPQ6ZWJ8 1503 aa27.63■■■□□ 2.01
SGMS1-210ENST00000619438 KLHL34Q8N239 644 aa27.62■■■□□ 2.01
SGMS1-210ENST00000619438 SIPA1L3O60292 1781 aaPredicted RBP27.62■■■□□ 2.01
SGMS1-210ENST00000619438 HEG1Q9ULI3 1381 aa27.62■■■□□ 2.01
SGMS1-210ENST00000619438 FANCIQ9NVI1 1328 aa27.61■■■□□ 2.01
SGMS1-210ENST00000619438 SYT17Q9BSW7 474 aa27.61■■■□□ 2.01
SGMS1-210ENST00000619438 CICQ96RK0 1608 aaPredicted RBP27.59■■■□□ 2.01
SGMS1-210ENST00000619438 CANXP27824 592 aaKnown RBP27.59■■■□□ 2.01
SGMS1-210ENST00000619438 UBR2Q8IWV8 1755 aa27.58■■■□□ 2.01
SGMS1-210ENST00000619438 ZBTB1Q9Y2K1 713 aa27.57■■■□□ 2
SGMS1-210ENST00000619438 SNRPA1P09661 255 aaKnown RBP27.56■■■□□ 2
SGMS1-210ENST00000619438 UTRNP46939 3433 aa27.56■■■□□ 2
SGMS1-210ENST00000619438 GOLGB1Q14789 3259 aaKnown RBP27.56■■■□□ 2
SGMS1-210ENST00000619438 NLGN1Q8N2Q7 840 aa27.56■■■□□ 2
SGMS1-210ENST00000619438 DLG5Q8TDM6 1919 aa27.56■■■□□ 2
SGMS1-210ENST00000619438 DCAF8L1A6NGE4 600 aa27.56■■■□□ 2
SGMS1-210ENST00000619438 C20orf194Q5TEA3 1177 aa27.56■■■□□ 2
SGMS1-210ENST00000619438 NPM2Q86SE8 214 aaKnown RBP27.56■■■□□ 2
SGMS1-210ENST00000619438 ZPR1O75312 459 aa27.55■■■□□ 2
SGMS1-210ENST00000619438 ZNF330Q9Y3S2 320 aaPredicted RBP27.54■■■□□ 2
SGMS1-210ENST00000619438 USP16Q9Y5T5 823 aa27.54■■■□□ 2
SGMS1-210ENST00000619438 TSPYL4Q9UJ04 414 aa27.53■■■□□ 2
SGMS1-210ENST00000619438 C4AP0C0L4 1744 aa27.53■■■□□ 2
SGMS1-210ENST00000619438 SOS1Q07889 1333 aaPredicted RBP27.53■■■□□ 2
SGMS1-210ENST00000619438 A1BGP04217 495 aa27.52■■■□□ 2
SGMS1-210ENST00000619438 GYS1P13807 737 aa27.52■■■□□ 2
SGMS1-210ENST00000619438 SRP68Q9UHB9 627 aaKnown RBP27.52■■■□□ 2
SGMS1-210ENST00000619438 PRAMEF22A3QJZ6 481 aa27.51■■□□□ 1.99
SGMS1-210ENST00000619438 MMP10P09238 476 aa27.5■■□□□ 1.99
SGMS1-210ENST00000619438 TRIM35Q9UPQ4 493 aa27.5■■□□□ 1.99
SGMS1-210ENST00000619438 LAS1LQ9Y4W2 734 aaKnown RBP27.5■■□□□ 1.99
SGMS1-210ENST00000619438 TCERG1O14776 1098 aaKnown RBP27.49■■□□□ 1.99
SGMS1-210ENST00000619438 USP42Q9H9J4 1324 aaKnown RBP27.49■■□□□ 1.99
SGMS1-210ENST00000619438 PDE3AQ14432 1141 aa27.49■■□□□ 1.99
SGMS1-210ENST00000619438 MYH16Q9H6N6 1097 aa27.49■■□□□ 1.99
SGMS1-210ENST00000619438 A0A087WZG4 1122 aa27.48■■□□□ 1.99
SGMS1-210ENST00000619438 EIF4A1P60842 406 aaKnown RBP27.48■■□□□ 1.99
SGMS1-210ENST00000619438 USPL1Q5W0Q7 1092 aa27.48■■□□□ 1.99
SGMS1-210ENST00000619438 COL15A1P39059 1388 aa27.48■■□□□ 1.99
SGMS1-210ENST00000619438 EIF5P55010 431 aaKnown RBP27.47■■□□□ 1.99
SGMS1-210ENST00000619438 NARFQ9UHQ1 456 aa27.47■■□□□ 1.99
SGMS1-210ENST00000619438 BCAR3O75815 825 aa27.46■■□□□ 1.99
SGMS1-210ENST00000619438 IL6STP40189 918 aaPredicted RBP27.46■■□□□ 1.99
SGMS1-210ENST00000619438 BABAM1Q9NWV8 329 aa27.46■■□□□ 1.99
SGMS1-210ENST00000619438 IL16Q14005 1332 aa27.46■■□□□ 1.99
SGMS1-210ENST00000619438 NLGN2Q8NFZ4 835 aa27.46■■□□□ 1.99
SGMS1-210ENST00000619438 PARP3Q9Y6F1 533 aa27.46■■□□□ 1.99
SGMS1-210ENST00000619438 KDM2BQ8NHM5 1336 aa27.45■■□□□ 1.99
SGMS1-210ENST00000619438 GIGYF1O75420 1035 aaPredicted RBP27.45■■□□□ 1.98
SGMS1-210ENST00000619438 CT47B1P0C2W7 299 aaPredicted RBP27.45■■□□□ 1.98
SGMS1-210ENST00000619438 MS4A1P11836 297 aa27.45■■□□□ 1.98
SGMS1-210ENST00000619438 PIP4K2AP48426 406 aaPredicted RBP27.44■■□□□ 1.98
SGMS1-210ENST00000619438 CD2APQ9Y5K6 639 aa27.44■■□□□ 1.98
SGMS1-210ENST00000619438 TBC1D2BQ9UPU7 963 aa27.43■■□□□ 1.98
SGMS1-210ENST00000619438 RARSP54136 660 aaKnown RBP27.42■■□□□ 1.98
SGMS1-210ENST00000619438 CENPQQ7L2Z9 268 aaPredicted RBP27.42■■□□□ 1.98
SGMS1-210ENST00000619438 CHL1O00533 1208 aa27.4■■□□□ 1.98
SGMS1-210ENST00000619438 CALD1Q05682 793 aaKnown RBP27.4■■□□□ 1.98
SGMS1-210ENST00000619438 AAMPQ13685 434 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms