RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
CNOT3-210ENST00000618939 ME1P48163 572 aa16.47■□□□□ 0.23
CNOT3-210ENST00000618939 USP26Q9BXU7 913 aa16.47■□□□□ 0.23
CNOT3-210ENST00000618939 G2E3Q7L622 706 aa16.47■□□□□ 0.23
CNOT3-210ENST00000618939 OTUD7AQ8TE49 926 aaPredicted RBP16.47■□□□□ 0.23
CNOT3-210ENST00000618939 PES1O00541 588 aaKnown RBP16.46■□□□□ 0.23
CNOT3-210ENST00000618939 MTERF4Q7Z6M4 381 aaKnown RBP16.46■□□□□ 0.23
CNOT3-210ENST00000618939 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
CNOT3-210ENST00000618939 CFAP45Q9UL16 551 aa16.46■□□□□ 0.23
CNOT3-210ENST00000618939 CHD1O14646 1710 aa16.46■□□□□ 0.23
CNOT3-210ENST00000618939 ERCC6L2Q5T890 1561 aa16.46■□□□□ 0.23
CNOT3-210ENST00000618939 ZSCAN23Q3MJ62 389 aa16.46■□□□□ 0.23
CNOT3-210ENST00000618939 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.46■□□□□ 0.236e-7■■■□□ 16.2
CNOT3-210ENST00000618939 STX6O43752 255 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 KDM4AO75164 1064 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 FAM177BA6PVY3 158 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 TPM1P09493 284 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
CNOT3-210ENST00000618939 ANKRD24Q8TF21 1146 aa16.45■□□□□ 0.22
CNOT3-210ENST00000618939 TET3O43151 1660 aa16.44■□□□□ 0.22
CNOT3-210ENST00000618939 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
CNOT3-210ENST00000618939 SART3Q15020 963 aaKnown RBP16.44■□□□□ 0.22
CNOT3-210ENST00000618939 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
CNOT3-210ENST00000618939 SCAND2PQ9GZW5 306 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-210ENST00000618939 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
CNOT3-210ENST00000618939 KIF1BO60333 1816 aa16.43■□□□□ 0.22
CNOT3-210ENST00000618939 MLH3Q9UHC1 1453 aa16.43■□□□□ 0.22
CNOT3-210ENST00000618939 A0A087WZG4 1122 aa16.43■□□□□ 0.22
CNOT3-210ENST00000618939 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
CNOT3-210ENST00000618939 ZGPATQ8N5A5 531 aaKnown RBP16.43■□□□□ 0.22
CNOT3-210ENST00000618939 YEATS2Q9ULM3 1422 aa16.43■□□□□ 0.22
CNOT3-210ENST00000618939 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
CNOT3-210ENST00000618939 ABCC4O15439 1325 aa16.43■□□□□ 0.22
CNOT3-210ENST00000618939 GJB2P29033 226 aa16.42■□□□□ 0.22
CNOT3-210ENST00000618939 KRT28Q7Z3Y7 464 aa16.42■□□□□ 0.22
CNOT3-210ENST00000618939 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-210ENST00000618939 CLTCL1P53675 1640 aa16.42■□□□□ 0.22
CNOT3-210ENST00000618939 SOS1Q07889 1333 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-210ENST00000618939 ALDH1L1O75891 902 aa16.42■□□□□ 0.22
CNOT3-210ENST00000618939 UQCRHLA0A096LP55 91 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 SMC2O95347 1197 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 UQCRHP07919 91 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 HOXC9P31274 260 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 CAMK4Q16566 473 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 TSR1Q2NL82 804 aaKnown RBP16.41■□□□□ 0.22
CNOT3-210ENST00000618939 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
CNOT3-210ENST00000618939 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-210ENST00000618939 ATP2B1P20020 1258 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 CHMLP26374 656 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 JMYQ8N9B5 988 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 USP25Q9UHP3 1055 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 TBX22Q9Y458 520 aa16.41■□□□□ 0.22
CNOT3-210ENST00000618939 AMOTL1Q8IY63 956 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-210ENST00000618939 CDC42BPBQ9Y5S2 1711 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 ZSCAN25Q6NSZ9 544 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 LRSAM1Q6UWE0 723 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 KSR2Q6VAB6 950 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
CNOT3-210ENST00000618939 SBNO1A3KN83 1393 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 IFIT1P09914 478 aaKnown RBP16.4■□□□□ 0.22
CNOT3-210ENST00000618939 XBP1P17861 261 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 CLCN1P35523 988 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
CNOT3-210ENST00000618939 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
CNOT3-210ENST00000618939 MARCH6O60337 910 aa16.39■□□□□ 0.21
CNOT3-210ENST00000618939 EFCAB6Q5THR3 1501 aa16.39■□□□□ 0.21
CNOT3-210ENST00000618939 MAP3K4Q9Y6R4 1608 aa16.39■□□□□ 0.21
CNOT3-210ENST00000618939 GRM8O00222 908 aa16.39■□□□□ 0.21
CNOT3-210ENST00000618939 ZSCAN22P10073 491 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-210ENST00000618939 UBE2HP62256 183 aa16.39■□□□□ 0.21
CNOT3-210ENST00000618939 LRRC59Q96AG4 307 aaKnown RBP16.39■□□□□ 0.21
CNOT3-210ENST00000618939 KCNA6P17658 529 aa16.38■□□□□ 0.21
CNOT3-210ENST00000618939 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-210ENST00000618939 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
CNOT3-210ENST00000618939 IMMTQ16891 758 aaKnown RBP16.38■□□□□ 0.21
CNOT3-210ENST00000618939 CFAP74Q9C0B2 1584 aa16.38■□□□□ 0.21
CNOT3-210ENST00000618939 CEP57L1Q8IYX8 460 aa16.38■□□□□ 0.21
CNOT3-210ENST00000618939 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 KIAA0232Q92628 1395 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
CNOT3-210ENST00000618939 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
CNOT3-210ENST00000618939 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 G3V3G9 751 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 DCAF8Q5TAQ9 597 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 LINS1Q8NG48 757 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 BRMS1Q9HCU9 246 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 KIF24Q5T7B8 1368 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 AKAP2Q9Y2D5 859 aa16.37■□□□□ 0.21
CNOT3-210ENST00000618939 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
CNOT3-210ENST00000618939 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-210ENST00000618939 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
CNOT3-210ENST00000618939 RBM8AQ9Y5S9 174 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms