RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 USP16Q9Y5T5 823 aa20.39■□□□□ 0.85
MALAT1-213ENST00000618227 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
MALAT1-213ENST00000618227 TSPYL6Q8N831 410 aa20.37■□□□□ 0.85
MALAT1-213ENST00000618227 LINC00116Q8NCU8 138 aa20.37■□□□□ 0.85
MALAT1-213ENST00000618227 C5P01031 1676 aa20.36■□□□□ 0.85
MALAT1-213ENST00000618227 HDGFL1Q5TGJ6 251 aa20.36■□□□□ 0.85
MALAT1-213ENST00000618227 CCDC30Q5VVM6 783 aa20.36■□□□□ 0.85
MALAT1-213ENST00000618227 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
MALAT1-213ENST00000618227 TJP1Q07157 1748 aa20.34■□□□□ 0.85
MALAT1-213ENST00000618227 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
MALAT1-213ENST00000618227 ELL2O00472 640 aaPredicted RBP20.34■□□□□ 0.85
MALAT1-213ENST00000618227 SOCS7O14512 581 aa20.34■□□□□ 0.85
MALAT1-213ENST00000618227 CRKLP46109 303 aaKnown RBP20.34■□□□□ 0.85
MALAT1-213ENST00000618227 INTS5Q6P9B9 1019 aaKnown RBP20.34■□□□□ 0.85
MALAT1-213ENST00000618227 RREB1Q92766 1687 aa20.33■□□□□ 0.85
MALAT1-213ENST00000618227 AKT1S1Q96B36 256 aa20.33■□□□□ 0.85
MALAT1-213ENST00000618227 DDX21Q9NR30 783 aaKnown RBP eCLIP20.33■□□□□ 0.85
MALAT1-213ENST00000618227 DBF4Q9UBU7 674 aaPredicted RBP20.33■□□□□ 0.85
MALAT1-213ENST00000618227 RPS6KA4O75676 772 aa20.32■□□□□ 0.84
MALAT1-213ENST00000618227 IL6STP40189 918 aaPredicted RBP20.32■□□□□ 0.84
MALAT1-213ENST00000618227 KCNQ4P56696 695 aa20.32■□□□□ 0.84
MALAT1-213ENST00000618227 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
MALAT1-213ENST00000618227 NBPF14Q5TI25 921 aa20.32■□□□□ 0.84
MALAT1-213ENST00000618227 COL5A3P25940 1745 aaPredicted RBP20.32■□□□□ 0.84
MALAT1-213ENST00000618227 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
MALAT1-213ENST00000618227 EIF2S2P20042 333 aaKnown RBP20.31■□□□□ 0.84
MALAT1-213ENST00000618227 FLAD1Q8NFF5 587 aa20.31■□□□□ 0.84
MALAT1-213ENST00000618227 AK7Q96M32 723 aa20.31■□□□□ 0.84
MALAT1-213ENST00000618227 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
MALAT1-213ENST00000618227 TAF1LQ8IZX4 1826 aa20.3■□□□□ 0.84
MALAT1-213ENST00000618227 A1BGP04217 495 aa20.3■□□□□ 0.84
MALAT1-213ENST00000618227 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
MALAT1-213ENST00000618227 PDIA6Q15084 440 aa20.3■□□□□ 0.84
MALAT1-213ENST00000618227 STK31Q9BXU1 1019 aa20.3■□□□□ 0.84
MALAT1-213ENST00000618227 STK32BQ9NY57 414 aa20.3■□□□□ 0.84
MALAT1-213ENST00000618227 NBPF26B4DH59 902 aa20.29■□□□□ 0.84
MALAT1-213ENST00000618227 SSFA2P28290 1259 aa20.29■□□□□ 0.84
MALAT1-213ENST00000618227 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
MALAT1-213ENST00000618227 NBPF10Q6P3W6 841 aaKnown RBP20.29■□□□□ 0.84
MALAT1-213ENST00000618227 NBPF15Q8N660 670 aa20.29■□□□□ 0.84
MALAT1-213ENST00000618227 ZBTB1Q9Y2K1 713 aa20.29■□□□□ 0.84
MALAT1-213ENST00000618227 RTCBQ9Y3I0 505 aaKnown RBP20.29■□□□□ 0.84
MALAT1-213ENST00000618227 C4BP0C0L5 1744 aa20.29■□□□□ 0.84
MALAT1-213ENST00000618227 A0A087WZG4 1122 aa20.28■□□□□ 0.84
MALAT1-213ENST00000618227 RGL2O15211 777 aa20.28■□□□□ 0.84
MALAT1-213ENST00000618227 SLC15A2Q16348 729 aa20.28■□□□□ 0.84
MALAT1-213ENST00000618227 LRP10Q7Z4F1 713 aa20.28■□□□□ 0.84
MALAT1-213ENST00000618227 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
MALAT1-213ENST00000618227 NUP188Q5SRE5 1749 aa20.27■□□□□ 0.83
MALAT1-213ENST00000618227 GNPATO15228 680 aa20.26■□□□□ 0.83
MALAT1-213ENST00000618227 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
MALAT1-213ENST00000618227 RARSP54136 660 aaKnown RBP20.26■□□□□ 0.83
MALAT1-213ENST00000618227 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
MALAT1-213ENST00000618227 TFCP2L1Q9NZI6 479 aa20.26■□□□□ 0.83
MALAT1-213ENST00000618227 SLC4A2P04920 1241 aa20.25■□□□□ 0.83
MALAT1-213ENST00000618227 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
MALAT1-213ENST00000618227 TRAPPC3LQ5T215 181 aa20.24■□□□□ 0.83
MALAT1-213ENST00000618227 SSH1Q8WYL5 1049 aa20.24■□□□□ 0.83
MALAT1-213ENST00000618227 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
MALAT1-213ENST00000618227 ANO8Q9HCE9 1232 aaPredicted RBP20.24■□□□□ 0.83
MALAT1-213ENST00000618227 MYH14Q7Z406 1995 aaKnown RBP20.23■□□□□ 0.83
MALAT1-213ENST00000618227 MRPL50Q8N5N7 158 aaKnown RBP20.23■□□□□ 0.83
MALAT1-213ENST00000618227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.22■□□□□ 0.83
MALAT1-213ENST00000618227 MYL6BP14649 208 aa20.22■□□□□ 0.83
MALAT1-213ENST00000618227 PROSER3Q2NL68 480 aa20.22■□□□□ 0.83
MALAT1-213ENST00000618227 COL15A1P39059 1388 aa20.21■□□□□ 0.83
MALAT1-213ENST00000618227 ERVV-1B6SEH8 477 aa20.21■□□□□ 0.83
MALAT1-213ENST00000618227 ARHGEF1Q92888 912 aaKnown RBP20.21■□□□□ 0.83
MALAT1-213ENST00000618227 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
MALAT1-213ENST00000618227 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
MALAT1-213ENST00000618227 CACNA1FO60840 1977 aa20.21■□□□□ 0.83
MALAT1-213ENST00000618227 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
MALAT1-213ENST00000618227 COPS6Q7L5N1 327 aa20.2■□□□□ 0.82
MALAT1-213ENST00000618227 ARHGAP45Q92619 1136 aa20.2■□□□□ 0.82
MALAT1-213ENST00000618227 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
MALAT1-213ENST00000618227 PTPRCP08575 1304 aa20.2■□□□□ 0.82
MALAT1-213ENST00000618227 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
MALAT1-213ENST00000618227 KIF16BQ96L93 1317 aa20.2■□□□□ 0.82
MALAT1-213ENST00000618227 RFC4P35249 363 aa20.19■□□□□ 0.82
MALAT1-213ENST00000618227 FLIIQ13045 1269 aa20.19■□□□□ 0.82
MALAT1-213ENST00000618227 CLEC4GQ6UXB4 293 aa20.19■□□□□ 0.82
MALAT1-213ENST00000618227 SLC16A10Q8TF71 515 aa20.19■□□□□ 0.82
MALAT1-213ENST00000618227 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
MALAT1-213ENST00000618227 UBR3Q6ZT12 1888 aa20.19■□□□□ 0.82
MALAT1-213ENST00000618227 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
MALAT1-213ENST00000618227 ANXA1P04083 346 aa20.18■□□□□ 0.82
MALAT1-213ENST00000618227 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
MALAT1-213ENST00000618227 KIF6Q6ZMV9 814 aa20.18■□□□□ 0.82
MALAT1-213ENST00000618227 AMIGO3Q86WK7 504 aa20.18■□□□□ 0.82
MALAT1-213ENST00000618227 DZIP3Q86Y13 1208 aaKnown RBP20.18■□□□□ 0.82
MALAT1-213ENST00000618227 PLBD2Q8NHP8 589 aa20.18■□□□□ 0.82
MALAT1-213ENST00000618227 TCERG1O14776 1098 aaKnown RBP20.17■□□□□ 0.82
MALAT1-213ENST00000618227 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
MALAT1-213ENST00000618227 ZPR1O75312 459 aa20.17■□□□□ 0.82
MALAT1-213ENST00000618227 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
MALAT1-213ENST00000618227 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
MALAT1-213ENST00000618227 PHAXQ9H814 394 aaKnown RBP20.17■□□□□ 0.82
MALAT1-213ENST00000618227 MAP3K15Q6ZN16 1313 aa20.17■□□□□ 0.82
MALAT1-213ENST00000618227 USP42Q9H9J4 1324 aaKnown RBP20.17■□□□□ 0.82
MALAT1-213ENST00000618227 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms