RNA–Protein interactions for RNA: ENST00000618048.2

KCNMA1-224, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-224ENST00000618048 VSIG10Q8N0Z9 540 aa28.87■■■□□ 2.21
KCNMA1-224ENST00000618048 ZBTB1Q9Y2K1 713 aa28.87■■■□□ 2.21
KCNMA1-224ENST00000618048 CEP350Q5VT06 3117 aa28.86■■■□□ 2.21
KCNMA1-224ENST00000618048 U2SURPO15042 1029 aaKnown RBP28.86■■■□□ 2.21
KCNMA1-224ENST00000618048 CNGB1Q14028 1251 aaPredicted RBP28.86■■■□□ 2.21
KCNMA1-224ENST00000618048 CHRNA5P30532 468 aa28.85■■■□□ 2.21
KCNMA1-224ENST00000618048 NARFQ9UHQ1 456 aa28.85■■■□□ 2.21
KCNMA1-224ENST00000618048 TTC5Q8N0Z6 440 aa28.84■■■□□ 2.21
KCNMA1-224ENST00000618048 NFIXQ14938 502 aa28.82■■■□□ 2.2
KCNMA1-224ENST00000618048 C9orf131Q5VYM1 1079 aa28.82■■■□□ 2.2
KCNMA1-224ENST00000618048 GAS2L2Q8NHY3 880 aa28.81■■■□□ 2.2
KCNMA1-224ENST00000618048 NRXN2Q9P2S2 1712 aa28.8■■■□□ 2.2
KCNMA1-224ENST00000618048 TEFQ10587 303 aa28.8■■■□□ 2.2
KCNMA1-224ENST00000618048 AFDNP55196 1824 aaKnown RBP28.8■■■□□ 2.2
KCNMA1-224ENST00000618048 GNAT3A8MTJ3 354 aa28.79■■■□□ 2.2
KCNMA1-224ENST00000618048 STARD3NLO95772 234 aa28.79■■■□□ 2.2
KCNMA1-224ENST00000618048 CANXP27824 592 aaKnown RBP28.79■■■□□ 2.2
KCNMA1-224ENST00000618048 TOMM70O94826 608 aa28.78■■■□□ 2.2
KCNMA1-224ENST00000618048 BCL2L12Q9HB09 334 aa28.78■■■□□ 2.2
KCNMA1-224ENST00000618048 NMRK2Q9NPI5 230 aa28.78■■■□□ 2.2
KCNMA1-224ENST00000618048 IL17REQ8NFR9 667 aa28.77■■■□□ 2.2
KCNMA1-224ENST00000618048 SIPA1L3O60292 1781 aaPredicted RBP28.77■■■□□ 2.2
KCNMA1-224ENST00000618048 ZNF496Q96IT1 587 aaPredicted RBP28.76■■■□□ 2.19
KCNMA1-224ENST00000618048 RNF181Q9P0P0 153 aa28.76■■■□□ 2.19
KCNMA1-224ENST00000618048 HEG1Q9ULI3 1381 aa28.75■■■□□ 2.19
KCNMA1-224ENST00000618048 SERPINB2P05120 415 aa28.75■■■□□ 2.19
KCNMA1-224ENST00000618048 ZNF790Q6PG37 636 aa28.75■■■□□ 2.19
KCNMA1-224ENST00000618048 EIF5P55010 431 aaKnown RBP28.74■■■□□ 2.19
KCNMA1-224ENST00000618048 CFAP53Q96M91 514 aa28.74■■■□□ 2.19
KCNMA1-224ENST00000618048 DLEC1Q9Y238 1755 aa28.74■■■□□ 2.19
KCNMA1-224ENST00000618048 A0A087WZG4 1122 aa28.73■■■□□ 2.19
KCNMA1-224ENST00000618048 TEX13AQ9BXU3 409 aaPredicted RBP28.72■■■□□ 2.19
KCNMA1-224ENST00000618048 SCN7AQ01118 1682 aa28.72■■■□□ 2.19
KCNMA1-224ENST00000618048 CEMIPQ8WUJ3 1361 aa28.72■■■□□ 2.19
KCNMA1-224ENST00000618048 KDM2BQ8NHM5 1336 aa28.71■■■□□ 2.19
KCNMA1-224ENST00000618048 APLP1P51693 650 aa28.71■■■□□ 2.19
KCNMA1-224ENST00000618048 PRKAR2BP31323 418 aa28.7■■■□□ 2.18
KCNMA1-224ENST00000618048 BICDL1Q6ZP65 573 aa28.7■■■□□ 2.18
KCNMA1-224ENST00000618048 CARMIL3Q8ND23 1372 aa28.7■■■□□ 2.18
KCNMA1-224ENST00000618048 C16orf71Q8IYS4 520 aaPredicted RBP28.69■■■□□ 2.18
KCNMA1-224ENST00000618048 FMNL2Q96PY5 1086 aa28.69■■■□□ 2.18
KCNMA1-224ENST00000618048 ZNF330Q9Y3S2 320 aaPredicted RBP28.69■■■□□ 2.18
KCNMA1-224ENST00000618048 SBF1O95248 1867 aa28.68■■■□□ 2.18
KCNMA1-224ENST00000618048 C2CD5Q86YS7 1000 aa28.68■■■□□ 2.18
KCNMA1-224ENST00000618048 PHACTR3Q96KR7 559 aa28.68■■■□□ 2.18
KCNMA1-224ENST00000618048 RSPH6AQ9H0K4 717 aa28.68■■■□□ 2.18
KCNMA1-224ENST00000618048 RASSF7Q02833 373 aa28.67■■■□□ 2.18
KCNMA1-224ENST00000618048 TTLL6Q8N841 843 aa28.67■■■□□ 2.18
KCNMA1-224ENST00000618048 RBM46Q8TBY0 533 aaKnown RBP28.67■■■□□ 2.18
KCNMA1-224ENST00000618048 NUDCQ9Y266 331 aa28.67■■■□□ 2.18
KCNMA1-224ENST00000618048 IL6STP40189 918 aaPredicted RBP28.66■■■□□ 2.18
KCNMA1-224ENST00000618048 TBC1D9BQ66K14 1250 aa28.66■■■□□ 2.18
KCNMA1-224ENST00000618048 TNRC6CQ9HCJ0 1690 aaKnown RBP28.66■■■□□ 2.18
KCNMA1-224ENST00000618048 H0YIN7 160 aa28.65■■■□□ 2.18
KCNMA1-224ENST00000618048 ZC3H4Q9UPT8 1303 aaKnown RBP28.65■■■□□ 2.18
KCNMA1-224ENST00000618048 BTBD11A6QL63 1104 aa28.64■■■□□ 2.18
KCNMA1-224ENST00000618048 NPM2Q86SE8 214 aaKnown RBP28.64■■■□□ 2.18
KCNMA1-224ENST00000618048 TBC1D2BQ9UPU7 963 aa28.64■■■□□ 2.18
KCNMA1-224ENST00000618048 A1BGP04217 495 aa28.62■■■□□ 2.17
KCNMA1-224ENST00000618048 LMNB1P20700 586 aa28.62■■■□□ 2.17
KCNMA1-224ENST00000618048 ANKRD31Q8N7Z5 1873 aa28.61■■■□□ 2.17
KCNMA1-224ENST00000618048 KCNQ3O43525 872 aa28.61■■■□□ 2.17
KCNMA1-224ENST00000618048 U2AF1L5P0DN76 240 aaPredicted RBP28.61■■■□□ 2.17
KCNMA1-224ENST00000618048 U2AF1Q01081 240 aaKnown RBP eCLIP28.61■■■□□ 2.17
KCNMA1-224ENST00000618048 PPP2R1AP30153 589 aa28.6■■■□□ 2.17
KCNMA1-224ENST00000618048 IFFO2Q5TF58 517 aa28.6■■■□□ 2.17
KCNMA1-224ENST00000618048 RRAGCQ9HB90 399 aa28.6■■■□□ 2.17
KCNMA1-224ENST00000618048 FSTL1Q12841 308 aa28.59■■■□□ 2.17
KCNMA1-224ENST00000618048 PRR5LQ6MZQ0 368 aa28.59■■■□□ 2.17
KCNMA1-224ENST00000618048 RTF1Q92541 710 aaKnown RBP28.59■■■□□ 2.17
KCNMA1-224ENST00000618048 BRIP1Q9BX63 1249 aa28.59■■■□□ 2.17
KCNMA1-224ENST00000618048 PDZRN3Q9UPQ7 1066 aa28.59■■■□□ 2.17
KCNMA1-224ENST00000618048 COL11A2P13942 1736 aaPredicted RBP28.58■■■□□ 2.17
KCNMA1-224ENST00000618048 TIAM2Q8IVF5 1701 aa28.58■■■□□ 2.17
KCNMA1-224ENST00000618048 WDR90Q96KV7 1748 aa28.58■■■□□ 2.17
KCNMA1-224ENST00000618048 BCORQ6W2J9 1755 aa28.58■■■□□ 2.17
KCNMA1-224ENST00000618048 CAMTA2O94983 1202 aa28.58■■■□□ 2.17
KCNMA1-224ENST00000618048 PDE6BP35913 854 aa28.58■■■□□ 2.17
KCNMA1-224ENST00000618048 PRELPP51888 382 aa28.57■■■□□ 2.16
KCNMA1-224ENST00000618048 ZNF622Q969S3 477 aaKnown RBP eCLIP28.57■■■□□ 2.16
KCNMA1-224ENST00000618048 NFKBIEO00221 500 aa28.56■■■□□ 2.16
KCNMA1-224ENST00000618048 DZIP3Q86Y13 1208 aaKnown RBP28.56■■■□□ 2.16
KCNMA1-224ENST00000618048 CNBD1Q8NA66 436 aa28.56■■■□□ 2.16
KCNMA1-224ENST00000618048 SETDB2Q96T68 719 aa28.56■■■□□ 2.16
KCNMA1-224ENST00000618048 NPHP1O15259 732 aa28.55■■■□□ 2.16
KCNMA1-224ENST00000618048 MCM10Q7L590 875 aa28.55■■■□□ 2.16
KCNMA1-224ENST00000618048 CCDC24Q8N4L8 307 aa28.55■■■□□ 2.16
KCNMA1-224ENST00000618048 DNAJC5GQ8N7S2 189 aa28.55■■■□□ 2.16
KCNMA1-224ENST00000618048 USP16Q9Y5T5 823 aa28.55■■■□□ 2.16
KCNMA1-224ENST00000618048 GLTPD2A6NH11 291 aa28.53■■■□□ 2.16
KCNMA1-224ENST00000618048 SNRPA1P09661 255 aaKnown RBP28.53■■■□□ 2.16
KCNMA1-224ENST00000618048 PIP4K2AP48426 406 aaPredicted RBP28.52■■■□□ 2.16
KCNMA1-224ENST00000618048 ST5P78524 1137 aa28.52■■■□□ 2.16
KCNMA1-224ENST00000618048 PRAMEF22A3QJZ6 481 aa28.51■■■□□ 2.15
KCNMA1-224ENST00000618048 C21orf2O43822 256 aa28.51■■■□□ 2.15
KCNMA1-224ENST00000618048 SMC1BQ8NDV3 1235 aa28.51■■■□□ 2.15
KCNMA1-224ENST00000618048 CCDC88AQ3V6T2 1871 aa28.51■■■□□ 2.15
KCNMA1-224ENST00000618048 HTATSF1O43719 755 aaKnown RBP28.5■■■□□ 2.15
KCNMA1-224ENST00000618048 DCTN1Q14203 1278 aa28.5■■■□□ 2.15
KCNMA1-224ENST00000618048 ZNF219Q9P2Y4 722 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms