RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 FKBP8Q14318 412 aa29.76■■■□□ 2.35
ARHGEF1-223ENST00000617585 RTF1Q92541 710 aaKnown RBP29.76■■■□□ 2.35
ARHGEF1-223ENST00000617585 PARP3Q9Y6F1 533 aa29.76■■■□□ 2.35
ARHGEF1-223ENST00000617585 PXDNLA1KZ92 1463 aa29.75■■■□□ 2.35
ARHGEF1-223ENST00000617585 BTBD11A6QL63 1104 aa29.75■■■□□ 2.35
ARHGEF1-223ENST00000617585 TM4SF1P30408 202 aa29.75■■■□□ 2.35
ARHGEF1-223ENST00000617585 FMNL2Q96PY5 1086 aa29.75■■■□□ 2.35
ARHGEF1-223ENST00000617585 NARFQ9UHQ1 456 aa29.75■■■□□ 2.35
ARHGEF1-223ENST00000617585 N4BP2Q86UW6 1770 aaPredicted RBP29.75■■■□□ 2.35
ARHGEF1-223ENST00000617585 BRCA1P38398 1863 aaKnown RBP29.74■■■□□ 2.35
ARHGEF1-223ENST00000617585 ZNF784Q8NCA9 323 aaPredicted RBP29.74■■■□□ 2.35
ARHGEF1-223ENST00000617585 ZPR1O75312 459 aa29.73■■■□□ 2.35
ARHGEF1-223ENST00000617585 EIF5P55010 431 aaKnown RBP29.73■■■□□ 2.35
ARHGEF1-223ENST00000617585 MCM10Q7L590 875 aa29.73■■■□□ 2.35
ARHGEF1-223ENST00000617585 USPL1Q5W0Q7 1092 aa29.72■■■□□ 2.35
ARHGEF1-223ENST00000617585 KCNQ3O43525 872 aa29.71■■■□□ 2.35
ARHGEF1-223ENST00000617585 DDR1Q08345 913 aa29.71■■■□□ 2.35
ARHGEF1-223ENST00000617585 PNNQ9H307 717 aaKnown RBP29.71■■■□□ 2.35
ARHGEF1-223ENST00000617585 NRXN2Q9P2S2 1712 aa29.71■■■□□ 2.35
ARHGEF1-223ENST00000617585 AFDNP55196 1824 aaKnown RBP29.69■■■□□ 2.34
ARHGEF1-223ENST00000617585 NEFMP07197 916 aa29.69■■■□□ 2.34
ARHGEF1-223ENST00000617585 POLRMTO00411 1230 aaKnown RBP29.68■■■□□ 2.34
ARHGEF1-223ENST00000617585 CANXP27824 592 aaKnown RBP29.68■■■□□ 2.34
ARHGEF1-223ENST00000617585 DCTN1Q14203 1278 aa29.68■■■□□ 2.34
ARHGEF1-223ENST00000617585 BCL2L12Q9HB09 334 aa29.68■■■□□ 2.34
ARHGEF1-223ENST00000617585 MYBBP1AQ9BQG0 1328 aaKnown RBP29.67■■■□□ 2.34
ARHGEF1-223ENST00000617585 A0A087WZG4 1122 aa29.66■■■□□ 2.34
ARHGEF1-223ENST00000617585 IL6STP40189 918 aaPredicted RBP29.66■■■□□ 2.34
ARHGEF1-223ENST00000617585 TAF7Q15545 349 aaPredicted RBP29.66■■■□□ 2.34
ARHGEF1-223ENST00000617585 NFE2L2Q16236 605 aa29.66■■■□□ 2.34
ARHGEF1-223ENST00000617585 SCN7AQ01118 1682 aa29.66■■■□□ 2.34
ARHGEF1-223ENST00000617585 KDM3BQ7LBC6 1761 aa29.65■■■□□ 2.34
ARHGEF1-223ENST00000617585 A0A0G2JLW4 131 aa29.63■■■□□ 2.33
ARHGEF1-223ENST00000617585 NFIXQ14938 502 aa29.63■■■□□ 2.33
ARHGEF1-223ENST00000617585 ARFGEF1Q9Y6D6 1849 aa29.63■■■□□ 2.33
ARHGEF1-223ENST00000617585 SNRPA1P09661 255 aaKnown RBP29.62■■■□□ 2.33
ARHGEF1-223ENST00000617585 KCNA3P22001 575 aa29.62■■■□□ 2.33
ARHGEF1-223ENST00000617585 USP16Q9Y5T5 823 aa29.62■■■□□ 2.33
ARHGEF1-223ENST00000617585 A1BGP04217 495 aa29.61■■■□□ 2.33
ARHGEF1-223ENST00000617585 DPEP1P16444 411 aa29.61■■■□□ 2.33
ARHGEF1-223ENST00000617585 BCORQ6W2J9 1755 aa29.6■■■□□ 2.33
ARHGEF1-223ENST00000617585 MAPK8IP3Q9UPT6 1336 aa29.6■■■□□ 2.33
ARHGEF1-223ENST00000617585 PNISRQ8TF01 805 aaKnown RBP29.59■■■□□ 2.33
ARHGEF1-223ENST00000617585 LAMB4A4D0S4 1761 aa29.59■■■□□ 2.33
ARHGEF1-223ENST00000617585 ADCY9O60503 1353 aa29.57■■■□□ 2.32
ARHGEF1-223ENST00000617585 PRAMEF22A3QJZ6 481 aa29.57■■■□□ 2.32
ARHGEF1-223ENST00000617585 WWC3Q9ULE0 1092 aa29.57■■■□□ 2.32
ARHGEF1-223ENST00000617585 DLEC1Q9Y238 1755 aa29.56■■■□□ 2.32
ARHGEF1-223ENST00000617585 SERPINB2P05120 415 aa29.55■■■□□ 2.32
ARHGEF1-223ENST00000617585 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
ARHGEF1-223ENST00000617585 PRKRIP1Q9H875 184 aaPredicted RBP29.54■■■□□ 2.32
ARHGEF1-223ENST00000617585 PIM2Q9P1W9 311 aa29.54■■■□□ 2.32
ARHGEF1-223ENST00000617585 TBC1D2BQ9UPU7 963 aa29.54■■■□□ 2.32
ARHGEF1-223ENST00000617585 CAMTA2O94983 1202 aa29.53■■■□□ 2.32
ARHGEF1-223ENST00000617585 MIS18AQ9NYP9 233 aa29.53■■■□□ 2.32
ARHGEF1-223ENST00000617585 BCS1LQ9Y276 419 aa29.53■■■□□ 2.32
ARHGEF1-223ENST00000617585 RGL2O15211 777 aa29.51■■■□□ 2.31
ARHGEF1-223ENST00000617585 TBC1D9BQ66K14 1250 aa29.51■■■□□ 2.31
ARHGEF1-223ENST00000617585 NPM2Q86SE8 214 aaKnown RBP29.51■■■□□ 2.31
ARHGEF1-223ENST00000617585 TMPOP42166 694 aaKnown RBP29.5■■■□□ 2.31
ARHGEF1-223ENST00000617585 EIF4A1P60842 406 aaKnown RBP29.5■■■□□ 2.31
ARHGEF1-223ENST00000617585 THUMPD2Q9BTF0 503 aaKnown RBP29.5■■■□□ 2.31
ARHGEF1-223ENST00000617585 ANKRD31Q8N7Z5 1873 aa29.5■■■□□ 2.31
ARHGEF1-223ENST00000617585 NBPF26B4DH59 902 aa29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 GIGYF1O75420 1035 aaPredicted RBP29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 RIPK4P57078 832 aa29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 NBPF10Q6P3W6 841 aaKnown RBP29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 CLEC4GQ6UXB4 293 aa29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 DZIP3Q86Y13 1208 aaKnown RBP29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 NBPF15Q8N660 670 aa29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 ZNF330Q9Y3S2 320 aaPredicted RBP29.49■■■□□ 2.31
ARHGEF1-223ENST00000617585 ATP10DQ9P241 1426 aa29.48■■■□□ 2.31
ARHGEF1-223ENST00000617585 CHRNA5P30532 468 aa29.48■■■□□ 2.31
ARHGEF1-223ENST00000617585 BABAM1Q9NWV8 329 aa29.48■■■□□ 2.31
ARHGEF1-223ENST00000617585 CARMIL3Q8ND23 1372 aa29.48■■■□□ 2.31
ARHGEF1-223ENST00000617585 DALRD3Q5D0E6 543 aaKnown RBP29.47■■■□□ 2.31
ARHGEF1-223ENST00000617585 PIP4K2AP48426 406 aaPredicted RBP29.46■■■□□ 2.31
ARHGEF1-223ENST00000617585 LMOD3Q0VAK6 560 aa29.45■■■□□ 2.31
ARHGEF1-223ENST00000617585 BICDL1Q6ZP65 573 aa29.45■■■□□ 2.31
ARHGEF1-223ENST00000617585 RUNDC1Q96C34 613 aa29.44■■■□□ 2.3
ARHGEF1-223ENST00000617585 PDZRN3Q9UPQ7 1066 aa29.44■■■□□ 2.3
ARHGEF1-223ENST00000617585 SETDB2Q96T68 719 aa29.43■■■□□ 2.3
ARHGEF1-223ENST00000617585 WDR43Q15061 677 aaKnown RBP eCLIP29.42■■■□□ 2.3
ARHGEF1-223ENST00000617585 PRR5LQ6MZQ0 368 aa29.42■■■□□ 2.3
ARHGEF1-223ENST00000617585 ARHGAP27Q6ZUM4 889 aa29.42■■■□□ 2.3
ARHGEF1-223ENST00000617585 BRIP1Q9BX63 1249 aa29.42■■■□□ 2.3
ARHGEF1-223ENST00000617585 ADAMTS8Q9UP79 889 aa29.42■■■□□ 2.3
ARHGEF1-223ENST00000617585 SBF1O95248 1867 aa29.42■■■□□ 2.3
ARHGEF1-223ENST00000617585 ZNF652Q9Y2D9 606 aa29.4■■■□□ 2.3
ARHGEF1-223ENST00000617585 CCDC146Q8IYE0 955 aa29.39■■■□□ 2.3
ARHGEF1-223ENST00000617585 TSPYL4Q9UJ04 414 aa29.39■■■□□ 2.3
ARHGEF1-223ENST00000617585 ERBB4Q15303 1308 aa29.39■■■□□ 2.3
ARHGEF1-223ENST00000617585 NUP98P52948 1817 aa29.38■■■□□ 2.29
ARHGEF1-223ENST00000617585 COL11A2P13942 1736 aaPredicted RBP29.38■■■□□ 2.29
ARHGEF1-223ENST00000617585 H0YIN7 160 aa29.38■■■□□ 2.29
ARHGEF1-223ENST00000617585 C1QTNF8P60827 252 aa29.38■■■□□ 2.29
ARHGEF1-223ENST00000617585 C2CD5Q86YS7 1000 aa29.38■■■□□ 2.29
ARHGEF1-223ENST00000617585 PDE6BP35913 854 aa29.37■■■□□ 2.29
ARHGEF1-223ENST00000617585 TRIM35Q9UPQ4 493 aa29.37■■■□□ 2.29
ARHGEF1-223ENST00000617585 TTLL6Q8N841 843 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms