RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 POLR3AO14802 1390 aaPredicted RBP21.82■■□□□ 1.08
CDH23-212ENST00000616684 KRT28Q7Z3Y7 464 aa21.82■■□□□ 1.08
CDH23-212ENST00000616684 TRMT112Q9UI30 125 aaKnown RBP21.82■■□□□ 1.08
CDH23-212ENST00000616684 CFAP100Q494V2 611 aa21.82■■□□□ 1.08
CDH23-212ENST00000616684 UBE3BQ7Z3V4 1068 aa21.82■■□□□ 1.08
CDH23-212ENST00000616684 DEF6Q9H4E7 631 aa21.82■■□□□ 1.08
CDH23-212ENST00000616684 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
CDH23-212ENST00000616684 ZNF652Q9Y2D9 606 aa21.82■■□□□ 1.08
CDH23-212ENST00000616684 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 SSBP05455 408 aaKnown RBP eCLIP21.81■■□□□ 1.08
CDH23-212ENST00000616684 C8orf58Q8NAV2 365 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 SYCP2Q9BX26 1530 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 BAG4O95429 457 aaKnown RBP21.81■■□□□ 1.08
CDH23-212ENST00000616684 SDSP20132 328 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 MAP3K12Q12852 859 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 TANGO6Q9C0B7 1094 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 ZNF213O14771 459 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 RHPN1Q8TCX5 695 aa21.81■■□□□ 1.08
CDH23-212ENST00000616684 HSP90AB3PQ58FF7 597 aa21.8■■□□□ 1.08
CDH23-212ENST00000616684 LUC7LQ9NQ29 371 aaKnown RBP21.8■■□□□ 1.08
CDH23-212ENST00000616684 RBM5P52756 815 aaKnown RBP eCLIP21.8■■□□□ 1.08
CDH23-212ENST00000616684 ANKRD44Q8N8A2 993 aa21.8■■□□□ 1.08
CDH23-212ENST00000616684 POLKQ9UBT6 870 aa21.8■■□□□ 1.08
CDH23-212ENST00000616684 CEP131Q9UPN4 1083 aa21.8■■□□□ 1.08
CDH23-212ENST00000616684 CAVIN4Q5BKX8 364 aa21.8■■□□□ 1.08
CDH23-212ENST00000616684 BMP2KQ9NSY1 1161 aaPredicted RBP21.8■■□□□ 1.08
CDH23-212ENST00000616684 ANO10Q9NW15 660 aa21.8■■□□□ 1.08
CDH23-212ENST00000616684 CCDC196A0A1B0GTZ2 297 aa21.79■■□□□ 1.08
CDH23-212ENST00000616684 ZSCAN29Q8IWY8 852 aaPredicted RBP21.79■■□□□ 1.08
CDH23-212ENST00000616684 CCDC82Q8N4S0 544 aa21.79■■□□□ 1.08
CDH23-212ENST00000616684 GOLIM4O00461 696 aa21.79■■□□□ 1.08
CDH23-212ENST00000616684 STX6O43752 255 aa21.79■■□□□ 1.08
CDH23-212ENST00000616684 TFIP11Q9UBB9 837 aaKnown RBP21.78■■□□□ 1.08
CDH23-212ENST00000616684 GPTP24298 496 aa21.78■■□□□ 1.08
CDH23-212ENST00000616684 CCT2P78371 535 aaKnown RBP21.78■■□□□ 1.08
CDH23-212ENST00000616684 ANKRD24Q8TF21 1146 aa21.78■■□□□ 1.08
CDH23-212ENST00000616684 A2MP01023 1474 aa21.78■■□□□ 1.08
CDH23-212ENST00000616684 TCOF1Q13428 1488 aaKnown RBP21.78■■□□□ 1.08
CDH23-212ENST00000616684 TNNQ9UQP3 1299 aa21.78■■□□□ 1.08
CDH23-212ENST00000616684 CKAP2LQ8IYA6 745 aa21.78■■□□□ 1.08
CDH23-212ENST00000616684 MRPL50Q8N5N7 158 aaKnown RBP21.78■■□□□ 1.08
CDH23-212ENST00000616684 ANKRD18BA2A2Z9 1011 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 SYCP1Q15431 976 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
CDH23-212ENST00000616684 GJB2P29033 226 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 CARD14Q9BXL6 1004 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 PDE1AP54750 535 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 PIP4K2BP78356 416 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 NOM1Q5C9Z4 860 aaKnown RBP21.77■■□□□ 1.08
CDH23-212ENST00000616684 SNRKQ9NRH2 765 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 USP25Q9UHP3 1055 aa21.77■■□□□ 1.08
CDH23-212ENST00000616684 SFPQP23246 707 aaKnown RBP eCLIP21.77■■□□□ 1.07
CDH23-212ENST00000616684 TNRQ92752 1358 aa21.77■■□□□ 1.07
CDH23-212ENST00000616684 TRAPPC8Q9Y2L5 1435 aa21.76■■□□□ 1.07
CDH23-212ENST00000616684 TTC21AQ8NDW8 1320 aa21.76■■□□□ 1.07
CDH23-212ENST00000616684 RLBP1P12271 317 aa21.76■■□□□ 1.07
CDH23-212ENST00000616684 PER1O15534 1290 aaPredicted RBP21.76■■□□□ 1.07
CDH23-212ENST00000616684 ITSN2Q9NZM3 1697 aa21.76■■□□□ 1.07
CDH23-212ENST00000616684 GOLGA8BA8MQT2 603 aa21.76■■□□□ 1.07
CDH23-212ENST00000616684 MYO6Q9UM54 1294 aa21.76■■□□□ 1.07
CDH23-212ENST00000616684 AXDND1Q5T1B0 1012 aaPredicted RBP21.76■■□□□ 1.07
CDH23-212ENST00000616684 LDHAL6AQ6ZMR3 332 aa21.76■■□□□ 1.07
CDH23-212ENST00000616684 EIF4A2Q14240 407 aaKnown RBP21.75■■□□□ 1.07
CDH23-212ENST00000616684 ZRANB1Q9UGI0 708 aa21.75■■□□□ 1.07
CDH23-212ENST00000616684 SLC5A1P13866 664 aa21.75■■□□□ 1.07
CDH23-212ENST00000616684 CWC25Q9NXE8 425 aaPredicted RBP21.75■■□□□ 1.07
CDH23-212ENST00000616684 PUS7Q96PZ0 661 aaKnown RBP21.75■■□□□ 1.07
CDH23-212ENST00000616684 CHPF2Q9P2E5 772 aa21.75■■□□□ 1.07
CDH23-212ENST00000616684 SNRPA1P09661 255 aaKnown RBP21.75■■□□□ 1.07
CDH23-212ENST00000616684 C8orf34Q49A92 452 aa21.75■■□□□ 1.07
CDH23-212ENST00000616684 ANKRD13DQ6ZTN6 518 aa21.75■■□□□ 1.07
CDH23-212ENST00000616684 CTCFLQ8NI51 663 aaPredicted RBP21.74■■□□□ 1.07
CDH23-212ENST00000616684 JARID2Q92833 1246 aaPredicted RBP21.74■■□□□ 1.07
CDH23-212ENST00000616684 TMX3Q96JJ7 454 aa21.74■■□□□ 1.07
CDH23-212ENST00000616684 SLC12A7Q9Y666 1083 aa21.74■■□□□ 1.07
CDH23-212ENST00000616684 USP5P45974 858 aa21.74■■□□□ 1.07
CDH23-212ENST00000616684 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
CDH23-212ENST00000616684 KLHL40Q2TBA0 621 aa21.74■■□□□ 1.07
CDH23-212ENST00000616684 MKNK2Q9HBH9 465 aa21.74■■□□□ 1.07
CDH23-212ENST00000616684 DDX19AQ9NUU7 478 aaKnown RBP21.74■■□□□ 1.07
CDH23-212ENST00000616684 IFIT3O14879 490 aaKnown RBP21.73■■□□□ 1.07
CDH23-212ENST00000616684 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
CDH23-212ENST00000616684 IQCA1Q86XH1 822 aa21.73■■□□□ 1.07
CDH23-212ENST00000616684 EIF5P55010 431 aaKnown RBP21.73■■□□□ 1.07
CDH23-212ENST00000616684 CCDC181Q5TID7 509 aa21.73■■□□□ 1.07
CDH23-212ENST00000616684 CHRNA2Q15822 529 aa21.73■■□□□ 1.07
CDH23-212ENST00000616684 EPB41L2O43491 1005 aaKnown RBP21.73■■□□□ 1.07
CDH23-212ENST00000616684 NEK1Q96PY6 1258 aa21.73■■□□□ 1.07
CDH23-212ENST00000616684 ZNF287Q9HBT7 754 aa21.73■■□□□ 1.07
CDH23-212ENST00000616684 CWC15Q9P013 229 aaKnown RBP21.73■■□□□ 1.07
CDH23-212ENST00000616684 ASXL2Q76L83 1435 aa21.73■■□□□ 1.07
CDH23-212ENST00000616684 CTAGE5O15320 804 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 ARHGAP29Q52LW3 1261 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 VAMP4O75379 141 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 SKIDA1Q1XH10 827 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 ZPR1O75312 459 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 TMEM132AQ24JP5 1023 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 KLHL10Q6JEL2 608 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 TSPYL6Q8N831 410 aa21.72■■□□□ 1.07
CDH23-212ENST00000616684 PIK3C2GO75747 1445 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms