RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 FLIIQ13045 1269 aa8.33□□□□□ -1.08
NEAT1-205ENST00000616315 USP4Q13107 963 aa8.33□□□□□ -1.08
NEAT1-205ENST00000616315 HOMEZQ8IX15 550 aa8.33□□□□□ -1.08
NEAT1-205ENST00000616315 DOLKQ9UPQ8 538 aa8.33□□□□□ -1.08
NEAT1-205ENST00000616315 PCDHGC4Q9Y5F7 938 aa8.33□□□□□ -1.08
NEAT1-205ENST00000616315 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
NEAT1-205ENST00000616315 CHSY3Q70JA7 882 aa8.31□□□□□ -1.08
NEAT1-205ENST00000616315 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
NEAT1-205ENST00000616315 PIK3R2O00459 728 aa8.3□□□□□ -1.08
NEAT1-205ENST00000616315 ATXN7O15265 892 aaPredicted RBP8.3□□□□□ -1.08
NEAT1-205ENST00000616315 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
NEAT1-205ENST00000616315 TNP2Q05952 138 aa8.3□□□□□ -1.08
NEAT1-205ENST00000616315 DOC2BQ14184 412 aa8.3□□□□□ -1.08
NEAT1-205ENST00000616315 OXLD1Q5BKU9 147 aa8.3□□□□□ -1.08
NEAT1-205ENST00000616315 FIGNL1Q6PIW4 674 aa8.3□□□□□ -1.08
NEAT1-205ENST00000616315 NLRP8Q86W28 1048 aa8.3□□□□□ -1.08
NEAT1-205ENST00000616315 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
NEAT1-205ENST00000616315 DCDC2BA2VCK2 349 aa8.29□□□□□ -1.08
NEAT1-205ENST00000616315 INHAP05111 366 aa8.29□□□□□ -1.08
NEAT1-205ENST00000616315 CD33P20138 364 aa8.29□□□□□ -1.08
NEAT1-205ENST00000616315 GDF10P55107 478 aa8.29□□□□□ -1.08
NEAT1-205ENST00000616315 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
NEAT1-205ENST00000616315 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
NEAT1-205ENST00000616315 NOP53Q9NZM5 478 aaKnown RBP8.29□□□□□ -1.08
NEAT1-205ENST00000616315 TBC1D2BQ9UPU7 963 aa8.29□□□□□ -1.08
NEAT1-205ENST00000616315 IRF5Q13568 498 aa8.28□□□□□ -1.08
NEAT1-205ENST00000616315 TRIM11Q96F44 468 aa8.28□□□□□ -1.08
NEAT1-205ENST00000616315 PSMG3-AS1Q96PY0 264 aa8.28□□□□□ -1.08
NEAT1-205ENST00000616315 SEMA6BQ9H3T3 888 aa8.28□□□□□ -1.08
NEAT1-205ENST00000616315 A0A1W2PNR3 127 aa8.27□□□□□ -1.09
NEAT1-205ENST00000616315 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
NEAT1-205ENST00000616315 ADH6P28332 368 aa8.27□□□□□ -1.09
NEAT1-205ENST00000616315 SLFNL1Q499Z3 407 aa8.27□□□□□ -1.09
NEAT1-205ENST00000616315 FAM182BQ5T319 152 aa8.27□□□□□ -1.09
NEAT1-205ENST00000616315 C1orf216Q8TAB5 229 aa8.27□□□□□ -1.09
NEAT1-205ENST00000616315 NIFKQ9BYG3 293 aaKnown RBP8.27□□□□□ -1.09
NEAT1-205ENST00000616315 APBB1O00213 710 aa8.26□□□□□ -1.09
NEAT1-205ENST00000616315 KHNYNO15037 678 aaKnown RBP8.26□□□□□ -1.09
NEAT1-205ENST00000616315 SMTNP53814 917 aa8.26□□□□□ -1.09
NEAT1-205ENST00000616315 PCBP4P57723 403 aaKnown RBP8.26□□□□□ -1.09
NEAT1-205ENST00000616315 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
NEAT1-205ENST00000616315 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
NEAT1-205ENST00000616315 USP3Q9Y6I4 520 aa8.26□□□□□ -1.09
NEAT1-205ENST00000616315 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
NEAT1-205ENST00000616315 STRN4Q9NRL3 753 aa8.25□□□□□ -1.09
NEAT1-205ENST00000616315 ARSJQ5FYB0 599 aaPredicted RBP8.24□□□□□ -1.09
NEAT1-205ENST00000616315 ZIC5Q96T25 663 aa8.24□□□□□ -1.09
NEAT1-205ENST00000616315 AVENQ9NQS1 362 aaPredicted RBP8.24□□□□□ -1.09
NEAT1-205ENST00000616315 SERTAD1Q9UHV2 236 aa8.24□□□□□ -1.09
NEAT1-205ENST00000616315 IQSEC3Q9UPP2 1182 aaPredicted RBP8.24□□□□□ -1.09
NEAT1-205ENST00000616315 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
NEAT1-205ENST00000616315 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
NEAT1-205ENST00000616315 SIRT1Q96EB6 747 aa8.23□□□□□ -1.09
NEAT1-205ENST00000616315 GATA4P43694 442 aa8.22□□□□□ -1.09
NEAT1-205ENST00000616315 VAC14Q08AM6 782 aa8.22□□□□□ -1.09
NEAT1-205ENST00000616315 MCM6Q14566 821 aa8.22□□□□□ -1.09
NEAT1-205ENST00000616315 ZNF468Q5VIY5 522 aaPredicted RBP8.22□□□□□ -1.09
NEAT1-205ENST00000616315 SLC4A9Q96Q91 983 aa8.22□□□□□ -1.09
NEAT1-205ENST00000616315 CDK2AP1O14519 115 aa8.21□□□□□ -1.1
NEAT1-205ENST00000616315 FAM157BP0CG42 384 aa8.21□□□□□ -1.1
NEAT1-205ENST00000616315 MTFR1Q15390 333 aa8.21□□□□□ -1.1
NEAT1-205ENST00000616315 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.1
NEAT1-205ENST00000616315 PRR12Q9ULL5 1215 aa8.21□□□□□ -1.1
NEAT1-205ENST00000616315 A6NJY4 79 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 EFSO43281 561 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 SPATA31C1P0DKV0 1188 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 UBTFP17480 764 aaKnown RBP8.2□□□□□ -1.1
NEAT1-205ENST00000616315 RSPO4Q2I0M5 234 aaPredicted RBP8.2□□□□□ -1.1
NEAT1-205ENST00000616315 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 FOXD4L6Q3SYB3 417 aaPredicted RBP8.2□□□□□ -1.1
NEAT1-205ENST00000616315 FOXD4L3Q6VB84 417 aaPredicted RBP8.2□□□□□ -1.1
NEAT1-205ENST00000616315 PLPP7Q8NBV4 271 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 MDFIQ99750 246 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 ZDHHC3Q9NYG2 299 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 PARP3Q9Y6F1 533 aa8.2□□□□□ -1.1
NEAT1-205ENST00000616315 TATP17735 454 aaPredicted RBP8.19□□□□□ -1.1
NEAT1-205ENST00000616315 CABP1Q9NZU7 370 aa8.19□□□□□ -1.1
NEAT1-205ENST00000616315 MARK1Q9P0L2 795 aa8.19□□□□□ -1.1
NEAT1-205ENST00000616315 A6NJR5 290 aa8.18□□□□□ -1.1
NEAT1-205ENST00000616315 TXLNAP40222 546 aa8.18□□□□□ -1.1
NEAT1-205ENST00000616315 MAP7D1Q3KQU3 841 aa8.18□□□□□ -1.1
NEAT1-205ENST00000616315 NKAPLQ5M9Q1 402 aa8.18□□□□□ -1.1
NEAT1-205ENST00000616315 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
NEAT1-205ENST00000616315 ELOA3CA0A087WX78 387 aaPredicted RBP8.17□□□□□ -1.1
NEAT1-205ENST00000616315 ELOA3DA6NLF2 546 aaPredicted RBP8.17□□□□□ -1.1
NEAT1-205ENST00000616315 COL9A3Q14050 684 aaPredicted RBP8.17□□□□□ -1.1
NEAT1-205ENST00000616315 ELOA3BQ3SY89 546 aa8.17□□□□□ -1.1
NEAT1-205ENST00000616315 SYT9Q86SS6 491 aa8.17□□□□□ -1.1
NEAT1-205ENST00000616315 ELOA3Q8NG57 546 aa8.17□□□□□ -1.1
NEAT1-205ENST00000616315 CLUAP1Q96AJ1 413 aa8.17□□□□□ -1.1
NEAT1-205ENST00000616315 PCDHGA11Q9Y5H2 935 aa8.17□□□□□ -1.1
NEAT1-205ENST00000616315 GJA3Q9Y6H8 435 aa8.17□□□□□ -1.1
NEAT1-205ENST00000616315 ZDHHC1Q8WTX9 485 aa8.16□□□□□ -1.1
NEAT1-205ENST00000616315 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
NEAT1-205ENST00000616315 GDPD2Q9HCC8 539 aa8.16□□□□□ -1.1
NEAT1-205ENST00000616315 TPSG1Q9NRR2 321 aa8.16□□□□□ -1.1
NEAT1-205ENST00000616315 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
NEAT1-205ENST00000616315 LAMC2Q13753 1193 aa8.15□□□□□ -1.1
NEAT1-205ENST00000616315 BICDL1Q6ZP65 573 aa8.15□□□□□ -1.1
NEAT1-205ENST00000616315 ARID3CA6NKF2 412 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms