RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 ESCO1Q5FWF5 840 aa14.97□□□□□ -0.01
MSH6-213ENST00000614496 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
MSH6-213ENST00000614496 TNMDQ9H2S6 317 aa14.97□□□□□ -0.01
MSH6-213ENST00000614496 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
MSH6-213ENST00000614496 NOL7Q9UMY1 257 aaKnown RBP14.97□□□□□ -0.01
MSH6-213ENST00000614496 ZSCAN22P10073 491 aaPredicted RBP14.96□□□□□ -0.01
MSH6-213ENST00000614496 GNL2Q13823 731 aaKnown RBP14.96□□□□□ -0.01
MSH6-213ENST00000614496 UNC5CLQ8IV45 518 aa14.96□□□□□ -0.01
MSH6-213ENST00000614496 MYOM1P52179 1685 aa14.96□□□□□ -0.01
MSH6-213ENST00000614496 ADGRB3O60242 1522 aa14.96□□□□□ -0.01
MSH6-213ENST00000614496 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
MSH6-213ENST00000614496 DNM1Q05193 864 aaKnown RBP14.96□□□□□ -0.01
MSH6-213ENST00000614496 C17orf53Q8N3J3 647 aaPredicted RBP14.96□□□□□ -0.01
MSH6-213ENST00000614496 PA2G4Q9UQ80 394 aaKnown RBP14.96□□□□□ -0.01
MSH6-213ENST00000614496 PIK3R4Q99570 1358 aa14.96□□□□□ -0.01
MSH6-213ENST00000614496 ANAPC15P60006 121 aa14.96□□□□□ -0.01
MSH6-213ENST00000614496 PPRC1Q5VV67 1664 aaKnown RBP14.96□□□□□ -0.02
MSH6-213ENST00000614496 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.95□□□□□ -0.02
MSH6-213ENST00000614496 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
MSH6-213ENST00000614496 NUP62CLQ9H1M0 184 aa14.95□□□□□ -0.02
MSH6-213ENST00000614496 NRDCO43847 1150 aa14.95□□□□□ -0.02
MSH6-213ENST00000614496 HMGN5P82970 282 aaKnown RBP14.95□□□□□ -0.02
MSH6-213ENST00000614496 PLEKHO1Q53GL0 409 aaPredicted RBP14.95□□□□□ -0.02
MSH6-213ENST00000614496 ABCC3O15438 1527 aa14.95□□□□□ -0.02
MSH6-213ENST00000614496 PTCH1Q13635 1447 aa14.95□□□□□ -0.02
MSH6-213ENST00000614496 PDCP20941 246 aa14.95□□□□□ -0.02
MSH6-213ENST00000614496 SPATA32Q96LK8 384 aa14.95□□□□□ -0.02
MSH6-213ENST00000614496 JARID2Q92833 1246 aaPredicted RBP14.94□□□□□ -0.02
MSH6-213ENST00000614496 BRD1O95696 1058 aa14.94□□□□□ -0.02
MSH6-213ENST00000614496 UBE2HP62256 183 aa14.94□□□□□ -0.02
MSH6-213ENST00000614496 NLRP2Q9NX02 1062 aa14.94□□□□□ -0.02
MSH6-213ENST00000614496 LRRC7Q96NW7 1537 aa14.93□□□□□ -0.02
MSH6-213ENST00000614496 SYT1P21579 422 aa14.93□□□□□ -0.02
MSH6-213ENST00000614496 ERC1Q8IUD2 1116 aa14.93□□□□□ -0.02
MSH6-213ENST00000614496 KDM4AO75164 1064 aa14.93□□□□□ -0.02
MSH6-213ENST00000614496 ZSCAN31Q96LW9 406 aaPredicted RBP14.93□□□□□ -0.02
MSH6-213ENST00000614496 ECHDC1Q9NTX5 307 aa14.93□□□□□ -0.02
MSH6-213ENST00000614496 MTERF4Q7Z6M4 381 aaKnown RBP14.93□□□□□ -0.02
MSH6-213ENST00000614496 METP08581 1390 aa14.93□□□□□ -0.02
MSH6-213ENST00000614496 MAP3K11Q16584 847 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 TTC5Q8N0Z6 440 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 INTS4Q96HW7 963 aaKnown RBP14.92□□□□□ -0.02
MSH6-213ENST00000614496 MAP3K2Q9Y2U5 619 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 SOS1Q07889 1333 aaPredicted RBP14.92□□□□□ -0.02
MSH6-213ENST00000614496 MCM5P33992 734 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 HS1BP3Q53T59 392 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 FAM173BQ6P4H8 233 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
MSH6-213ENST00000614496 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
MSH6-213ENST00000614496 TPD52L1Q16890 204 aaPredicted RBP14.92□□□□□ -0.02
MSH6-213ENST00000614496 PNPLA6Q8IY17 1366 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 MLH3Q9UHC1 1453 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 SETBP1Q9Y6X0 1596 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 F13A1P00488 732 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 CCDC73Q6ZRK6 1079 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 TSC1Q92574 1164 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 FMNL2Q96PY5 1086 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 KIF3AQ9Y496 699 aa14.92□□□□□ -0.02
MSH6-213ENST00000614496 DDIT3P35638 169 aa14.91□□□□□ -0.02
MSH6-213ENST00000614496 CBX1P83916 185 aa14.91□□□□□ -0.02
MSH6-213ENST00000614496 NOLC1Q14978 699 aaKnown RBP eCLIP14.91□□□□□ -0.02
MSH6-213ENST00000614496 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
MSH6-213ENST00000614496 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
MSH6-213ENST00000614496 NPHP1O15259 732 aa14.91□□□□□ -0.02
MSH6-213ENST00000614496 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 KIAA1210Q9ULL0 1709 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 PRR36Q9H6K5 1346 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 ARAP3Q8WWN8 1544 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 HIP1O00291 1037 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 CWF19L2Q2TBE0 894 aaKnown RBP14.9□□□□□ -0.02
MSH6-213ENST00000614496 SDF4Q9BRK5 362 aa14.9□□□□□ -0.02
MSH6-213ENST00000614496 FLT4P35916 1363 aa14.89□□□□□ -0.03
MSH6-213ENST00000614496 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
MSH6-213ENST00000614496 RBM8AQ9Y5S9 174 aaKnown RBP14.89□□□□□ -0.03
MSH6-213ENST00000614496 KIF24Q5T7B8 1368 aa14.89□□□□□ -0.03
MSH6-213ENST00000614496 KIAA0232Q92628 1395 aa14.89□□□□□ -0.03
MSH6-213ENST00000614496 MROH2AA6NES4 1674 aa14.89□□□□□ -0.03
MSH6-213ENST00000614496 FILIP1Q7Z7B0 1213 aa14.89□□□□□ -0.03
MSH6-213ENST00000614496 ADGRB1O14514 1584 aa14.89□□□□□ -0.03
MSH6-213ENST00000614496 INO80Q9ULG1 1556 aaPredicted RBP14.89□□□□□ -0.03
MSH6-213ENST00000614496 DYNC1I1O14576 645 aa14.88□□□□□ -0.03
MSH6-213ENST00000614496 SH2B1Q9NRF2 756 aaPredicted RBP14.88□□□□□ -0.03
MSH6-213ENST00000614496 LRRC59Q96AG4 307 aaKnown RBP14.88□□□□□ -0.03
MSH6-213ENST00000614496 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
MSH6-213ENST00000614496 SGSM2O43147 1006 aa14.88□□□□□ -0.03
MSH6-213ENST00000614496 GUCY1B3Q02153 619 aa14.88□□□□□ -0.03
MSH6-213ENST00000614496 LRRC2Q9BYS8 371 aa14.88□□□□□ -0.03
MSH6-213ENST00000614496 NRXN1Q9ULB1 1477 aa14.88□□□□□ -0.03
MSH6-213ENST00000614496 TPM3P06753 285 aa14.87□□□□□ -0.03
MSH6-213ENST00000614496 ANKRD1Q15327 319 aa14.87□□□□□ -0.03
MSH6-213ENST00000614496 C16orf45Q96MC5 204 aaPredicted RBP14.87□□□□□ -0.03
MSH6-213ENST00000614496 LGR6Q9HBX8 967 aa14.87□□□□□ -0.03
MSH6-213ENST00000614496 KINO60870 393 aaKnown RBP14.87□□□□□ -0.03
MSH6-213ENST00000614496 ZC3H6P61129 1189 aaKnown RBP14.87□□□□□ -0.03
MSH6-213ENST00000614496 UVSSAQ2YD98 709 aa14.87□□□□□ -0.03
MSH6-213ENST00000614496 IL17REQ8NFR9 667 aa14.87□□□□□ -0.03
MSH6-213ENST00000614496 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
MSH6-213ENST00000614496 HSPA4P34932 840 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms