RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 POGZQ7Z3K3 1410 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 ARHGEF40Q8TER5 1519 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 SGSM2O43147 1006 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 TATDN2Q93075 761 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 PREX2Q70Z35 1606 aa20.27■□□□□ 0.84
CDK11B-205ENST00000611150 ZDHHC9Q9Y397 364 aa20.27■□□□□ 0.84
CDK11B-205ENST00000611150 CCDC186Q7Z3E2 898 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 TADA2BQ86TJ2 420 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 TEX13AQ9BXU3 409 aaPredicted RBP20.27■□□□□ 0.83
CDK11B-205ENST00000611150 MKRN1Q9UHC7 482 aaKnown RBP20.27■□□□□ 0.83
CDK11B-205ENST00000611150 CCDC171Q6TFL3 1326 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 RPS6KA5O75582 802 aa20.26■□□□□ 0.83
CDK11B-205ENST00000611150 GBP6Q6ZN66 633 aa20.26■□□□□ 0.83
CDK11B-205ENST00000611150 MAGI2Q86UL8 1455 aa20.26■□□□□ 0.83
CDK11B-205ENST00000611150 GNL3LQ9NVN8 582 aaKnown RBP20.26■□□□□ 0.83
CDK11B-205ENST00000611150 CCDC183Q5T5S1 534 aa20.25■□□□□ 0.83
CDK11B-205ENST00000611150 FILIP1Q7Z7B0 1213 aa20.25■□□□□ 0.83
CDK11B-205ENST00000611150 ADAM21Q9UKJ8 722 aa20.25■□□□□ 0.83
CDK11B-205ENST00000611150 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 A0A087WUV0 522 aaPredicted RBP20.24■□□□□ 0.83
CDK11B-205ENST00000611150 NPHP1O15259 732 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 CCT2P78371 535 aaKnown RBP20.24■□□□□ 0.83
CDK11B-205ENST00000611150 SLC24A3Q9HC58 644 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 PTPN14Q15678 1187 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 TEX11Q8IYF3 940 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 ZCCHC17Q9NP64 241 aaKnown RBP20.24■□□□□ 0.83
CDK11B-205ENST00000611150 ERBB3P21860 1342 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 SMC1AQ14683 1233 aaKnown RBP20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ELP1O95163 1332 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 C1QTNF12Q5T7M4 302 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 KLHL23Q8NBE8 558 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 PIK3R5Q8WYR1 880 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 SH3GL3Q99963 347 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 CPSF2Q9P2I0 782 aaKnown RBP20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 NEFHP12036 1026 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 ELF1P32519 619 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 A1CFQ9NQ94 594 aaKnown RBP20.22■□□□□ 0.83
CDK11B-205ENST00000611150 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
CDK11B-205ENST00000611150 TRAF1Q13077 416 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 NEDD9Q14511 834 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 ERCC6LQ2NKX8 1250 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
CDK11B-205ENST00000611150 FAM107BQ9H098 131 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 ZNF518AQ6AHZ1 1483 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 MICALL1Q8N3F8 863 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 SUDS3Q9H7L9 328 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-205ENST00000611150 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-205ENST00000611150 PAX7P23759 505 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 TRIM6Q9C030 488 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-205ENST00000611150 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 AP5Z1O43299 807 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 GCFC2P16383 781 aaKnown RBP20.2■□□□□ 0.82
CDK11B-205ENST00000611150 WWC2Q6AWC2 1192 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 PLXNC1O60486 1568 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 MBD5Q9P267 1494 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 RWDD2BP57060 319 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 LRMPQ12912 555 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ARHGAP29Q52LW3 1261 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 CHAMP1Q96JM3 812 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
CDK11B-205ENST00000611150 BMP2KLQ5H9B9 411 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ANKRD45Q5TZF3 282 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ZSCAN25Q6NSZ9 544 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ARMCX6Q7L4S7 300 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 CCDC26Q8TAB7 109 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 SRRTQ9BXP5 876 aaKnown RBP20.19■□□□□ 0.82
CDK11B-205ENST00000611150 FAM135AQ9P2D6 1515 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
CDK11B-205ENST00000611150 TBC1D8BQ0IIM8 1120 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
CDK11B-205ENST00000611150 AFAP1Q8N556 730 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 ABCC1P33527 1531 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 EHBP1L1Q8N3D4 1523 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 ADAMTSL3P82987 1691 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 KINO60870 393 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 MX1P20591 662 aa20.17■□□□□ 0.82
CDK11B-205ENST00000611150 HNRNPH1P31943 449 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 NYAP1Q6ZVC0 841 aa20.17■□□□□ 0.82
CDK11B-205ENST00000611150 SPATS2LQ9NUQ6 558 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 ZGPATQ8N5A5 531 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 ERLIN2O94905 339 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
CDK11B-205ENST00000611150 DRC7Q8IY82 874 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 GPRASP1Q5JY77 1395 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 CRYMQ14894 314 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 CARD11Q9BXL7 1154 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 NRDCO43847 1150 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 SETDB1Q15047 1291 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 ITSN2Q9NZM3 1697 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms