RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 GAS2L2Q8NHY3 880 aa7.83□□□□□ -1.16
FOCAD-213ENST00000604254 PHF12Q96QT6 1004 aa7.83□□□□□ -1.16
FOCAD-213ENST00000604254 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
FOCAD-213ENST00000604254 PHF14O94880 888 aa7.82□□□□□ -1.16
FOCAD-213ENST00000604254 U2AF1L5P0DN76 240 aaPredicted RBP7.82□□□□□ -1.16
FOCAD-213ENST00000604254 POLD1P28340 1107 aa7.82□□□□□ -1.16
FOCAD-213ENST00000604254 PRKAR2BP31323 418 aa7.82□□□□□ -1.16
FOCAD-213ENST00000604254 U2AF1Q01081 240 aaKnown RBP eCLIP7.82□□□□□ -1.16
FOCAD-213ENST00000604254 DDX10Q13206 875 aaKnown RBP7.82□□□□□ -1.16
FOCAD-213ENST00000604254 MTHFSDQ2M296 383 aaKnown RBP7.82□□□□□ -1.16
FOCAD-213ENST00000604254 SLC16A10Q8TF71 515 aa7.82□□□□□ -1.16
FOCAD-213ENST00000604254 HAX1O00165 279 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 GNPATO15228 680 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 RNMTO43148 476 aaKnown RBP7.81□□□□□ -1.16
FOCAD-213ENST00000604254 HSPA6P17066 643 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 ITPK1Q13572 414 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 GPR162Q16538 588 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 NFATC2IPQ8NCF5 419 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 LINC00116Q8NCU8 138 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 FLAD1Q8NFF5 587 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 RSPH6AQ9H0K4 717 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 SLC52A2Q9HAB3 445 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 KCPQ6ZWJ8 1503 aa7.81□□□□□ -1.16
FOCAD-213ENST00000604254 MYH14Q7Z406 1995 aaKnown RBP7.8□□□□□ -1.16
FOCAD-213ENST00000604254 GNAT3A8MTJ3 354 aa7.8□□□□□ -1.16
FOCAD-213ENST00000604254 GRIN3BO60391 1043 aa7.8□□□□□ -1.16
FOCAD-213ENST00000604254 PTCD1O75127 700 aaKnown RBP7.8□□□□□ -1.16
FOCAD-213ENST00000604254 NEFMP07197 916 aa7.8□□□□□ -1.16
FOCAD-213ENST00000604254 SSFA2P28290 1259 aa7.8□□□□□ -1.16
FOCAD-213ENST00000604254 RALBP1Q15311 655 aa7.8□□□□□ -1.16
FOCAD-213ENST00000604254 MSL1Q68DK7 614 aa7.8□□□□□ -1.16
FOCAD-213ENST00000604254 COL23A1Q86Y22 540 aaPredicted RBP7.8□□□□□ -1.16
FOCAD-213ENST00000604254 LGR6Q9HBX8 967 aa7.8□□□□□ -1.16
FOCAD-213ENST00000604254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.79□□□□□ -1.16
FOCAD-213ENST00000604254 TEFQ10587 303 aa7.79□□□□□ -1.16
FOCAD-213ENST00000604254 LAMB4A4D0S4 1761 aa7.79□□□□□ -1.16
FOCAD-213ENST00000604254 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
FOCAD-213ENST00000604254 MYBBP1AQ9BQG0 1328 aaKnown RBP7.78□□□□□ -1.16
FOCAD-213ENST00000604254 CNTNAP4Q9C0A0 1308 aa7.78□□□□□ -1.16
FOCAD-213ENST00000604254 FCHSD2O94868 740 aa7.78□□□□□ -1.16
FOCAD-213ENST00000604254 AMIGO3Q86WK7 504 aa7.78□□□□□ -1.16
FOCAD-213ENST00000604254 TTC5Q8N0Z6 440 aa7.78□□□□□ -1.16
FOCAD-213ENST00000604254 RTF1Q92541 710 aaKnown RBP7.78□□□□□ -1.16
FOCAD-213ENST00000604254 PHACTR3Q96KR7 559 aa7.78□□□□□ -1.16
FOCAD-213ENST00000604254 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
FOCAD-213ENST00000604254 RTCBQ9Y3I0 505 aaKnown RBP7.78□□□□□ -1.16
FOCAD-213ENST00000604254 MAPK8IP3Q9UPT6 1336 aa7.78□□□□□ -1.16
FOCAD-213ENST00000604254 KDM3BQ7LBC6 1761 aa7.77□□□□□ -1.17
FOCAD-213ENST00000604254 CEMIPQ8WUJ3 1361 aa7.77□□□□□ -1.17
FOCAD-213ENST00000604254 MAP3K13O43283 966 aa7.77□□□□□ -1.17
FOCAD-213ENST00000604254 CRKLP46109 303 aaKnown RBP7.77□□□□□ -1.17
FOCAD-213ENST00000604254 SLC39A6Q13433 755 aa7.77□□□□□ -1.17
FOCAD-213ENST00000604254 SMIM5Q71RC9 77 aa7.77□□□□□ -1.17
FOCAD-213ENST00000604254 PCDHB8Q9UN66 801 aa7.77□□□□□ -1.17
FOCAD-213ENST00000604254 PCDHB13Q9Y5F0 798 aa7.77□□□□□ -1.17
FOCAD-213ENST00000604254 SCN7AQ01118 1682 aa7.76□□□□□ -1.17
FOCAD-213ENST00000604254 KIF13BQ9NQT8 1826 aa7.76□□□□□ -1.17
FOCAD-213ENST00000604254 CHRM1P11229 460 aaPredicted RBP7.76□□□□□ -1.17
FOCAD-213ENST00000604254 RC3H1Q5TC82 1133 aaKnown RBP7.76□□□□□ -1.17
FOCAD-213ENST00000604254 ZNF579Q8NAF0 562 aaKnown RBP7.76□□□□□ -1.17
FOCAD-213ENST00000604254 IL17REQ8NFR9 667 aa7.76□□□□□ -1.17
FOCAD-213ENST00000604254 KIF12Q96FN5 646 aa7.76□□□□□ -1.17
FOCAD-213ENST00000604254 PNNQ9H307 717 aaKnown RBP7.76□□□□□ -1.17
FOCAD-213ENST00000604254 BCORQ6W2J9 1755 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 RIOK3O14730 519 aaKnown RBP7.75□□□□□ -1.17
FOCAD-213ENST00000604254 RPS6KA4O75676 772 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 RFC4P35249 363 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 WDR43Q15061 677 aaKnown RBP eCLIP7.75□□□□□ -1.17
FOCAD-213ENST00000604254 TRAPPC3LQ5T215 181 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 ZNF790Q6PG37 636 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 MCM10Q7L590 875 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 DNAJC10Q8IXB1 793 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 DNAJC5GQ8N7S2 189 aa7.75□□□□□ -1.17
FOCAD-213ENST00000604254 GPBP1L1Q9HC44 474 aaPredicted RBP7.75□□□□□ -1.17
FOCAD-213ENST00000604254 N4BP2Q86UW6 1770 aaPredicted RBP7.74□□□□□ -1.17
FOCAD-213ENST00000604254 COL15A1P39059 1388 aa7.74□□□□□ -1.17
FOCAD-213ENST00000604254 HEG1Q9ULI3 1381 aa7.74□□□□□ -1.17
FOCAD-213ENST00000604254 BTBD11A6QL63 1104 aa7.74□□□□□ -1.17
FOCAD-213ENST00000604254 HTATSF1O43719 755 aaKnown RBP7.74□□□□□ -1.17
FOCAD-213ENST00000604254 IFNL1Q8IU54 200 aa7.74□□□□□ -1.17
FOCAD-213ENST00000604254 PELP1Q8IZL8 1130 aaKnown RBP7.74□□□□□ -1.17
FOCAD-213ENST00000604254 VSIG10Q8N0Z9 540 aa7.74□□□□□ -1.17
FOCAD-213ENST00000604254 CCDC87Q9NVE4 849 aa7.74□□□□□ -1.17
FOCAD-213ENST00000604254 USP42Q9H9J4 1324 aaKnown RBP7.74□□□□□ -1.17
FOCAD-213ENST00000604254 AFDNP55196 1824 aaKnown RBP7.73□□□□□ -1.17
FOCAD-213ENST00000604254 ADCY9O60503 1353 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 KIAA1551Q9HCM1 1747 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 ATP10DQ9P241 1426 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 STARD3NLO95772 234 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 MMP10P09238 476 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 CYP19A1P11511 503 aaPredicted RBP7.73□□□□□ -1.17
FOCAD-213ENST00000604254 DCTN1Q14203 1278 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 NFE2L2Q16236 605 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 INTS5Q6P9B9 1019 aaKnown RBP7.73□□□□□ -1.17
FOCAD-213ENST00000604254 NLGN2Q8NFZ4 835 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 ARHGEF1Q92888 912 aaKnown RBP7.73□□□□□ -1.17
FOCAD-213ENST00000604254 MS4A3Q96HJ5 214 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 ZNF496Q96IT1 587 aaPredicted RBP7.73□□□□□ -1.17
FOCAD-213ENST00000604254 FMNL2Q96PY5 1086 aa7.73□□□□□ -1.17
FOCAD-213ENST00000604254 PLEKHF1Q96S99 279 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms