RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 TTC5Q8N0Z6 440 aa27.22■■□□□ 1.95
GRAMD1A-214ENST00000603907 WWC3Q9ULE0 1092 aa27.22■■□□□ 1.95
GRAMD1A-214ENST00000603907 ZNF790Q6PG37 636 aa27.21■■□□□ 1.95
GRAMD1A-214ENST00000603907 SMIM5Q71RC9 77 aa27.21■■□□□ 1.95
GRAMD1A-214ENST00000603907 LINC00116Q8NCU8 138 aa27.21■■□□□ 1.95
GRAMD1A-214ENST00000603907 WWC1Q8IX03 1113 aa27.2■■□□□ 1.94
GRAMD1A-214ENST00000603907 GNPATO15228 680 aa27.18■■□□□ 1.94
GRAMD1A-214ENST00000603907 SLC39A6Q13433 755 aa27.18■■□□□ 1.94
GRAMD1A-214ENST00000603907 ZNF831Q5JPB2 1677 aa27.17■■□□□ 1.94
GRAMD1A-214ENST00000603907 ATP6V1AP38606 617 aa27.16■■□□□ 1.94
GRAMD1A-214ENST00000603907 WDR63Q8IWG1 891 aa27.16■■□□□ 1.94
GRAMD1A-214ENST00000603907 VSIG10Q8N0Z9 540 aa27.16■■□□□ 1.94
GRAMD1A-214ENST00000603907 CFAP44Q96MT7 982 aa27.16■■□□□ 1.94
GRAMD1A-214ENST00000603907 CICQ96RK0 1608 aaPredicted RBP27.16■■□□□ 1.94
GRAMD1A-214ENST00000603907 IL16Q14005 1332 aa27.16■■□□□ 1.94
GRAMD1A-214ENST00000603907 FMNL2Q96PY5 1086 aa27.15■■□□□ 1.94
GRAMD1A-214ENST00000603907 RBM42Q9BTD8 480 aaKnown RBP27.15■■□□□ 1.94
GRAMD1A-214ENST00000603907 IFT57Q9NWB7 429 aa27.15■■□□□ 1.94
GRAMD1A-214ENST00000603907 KCPQ6ZWJ8 1503 aa27.15■■□□□ 1.94
GRAMD1A-214ENST00000603907 UBR2Q8IWV8 1755 aa27.14■■□□□ 1.94
GRAMD1A-214ENST00000603907 CHL1O00533 1208 aa27.14■■□□□ 1.94
GRAMD1A-214ENST00000603907 PTCD1O75127 700 aaKnown RBP27.14■■□□□ 1.94
GRAMD1A-214ENST00000603907 GNAI1P63096 354 aa27.14■■□□□ 1.94
GRAMD1A-214ENST00000603907 ITPK1Q13572 414 aa27.14■■□□□ 1.94
GRAMD1A-214ENST00000603907 TSPYL4Q9UJ04 414 aa27.14■■□□□ 1.94
GRAMD1A-214ENST00000603907 KIF13BQ9NQT8 1826 aa27.13■■□□□ 1.93
GRAMD1A-214ENST00000603907 MMP10P09238 476 aa27.13■■□□□ 1.93
GRAMD1A-214ENST00000603907 KDM3BQ7LBC6 1761 aa27.12■■□□□ 1.93
GRAMD1A-214ENST00000603907 ZNF853P0CG23 659 aa27.12■■□□□ 1.93
GRAMD1A-214ENST00000603907 SALL2Q9Y467 1007 aaPredicted RBP27.12■■□□□ 1.93
GRAMD1A-214ENST00000603907 KIF3CO14782 793 aa27.11■■□□□ 1.93
GRAMD1A-214ENST00000603907 ZNF496Q96IT1 587 aaPredicted RBP27.11■■□□□ 1.93
GRAMD1A-214ENST00000603907 MIS18AQ9NYP9 233 aa27.11■■□□□ 1.93
GRAMD1A-214ENST00000603907 HEG1Q9ULI3 1381 aa27.1■■□□□ 1.93
GRAMD1A-214ENST00000603907 SLC4A9Q96Q91 983 aa27.1■■□□□ 1.93
GRAMD1A-214ENST00000603907 TEX13AQ9BXU3 409 aaPredicted RBP27.1■■□□□ 1.93
GRAMD1A-214ENST00000603907 ZNF521Q96K83 1311 aa27.1■■□□□ 1.93
GRAMD1A-214ENST00000603907 N4BP2Q86UW6 1770 aaPredicted RBP27.09■■□□□ 1.93
GRAMD1A-214ENST00000603907 PXDNLA1KZ92 1463 aa27.09■■□□□ 1.93
GRAMD1A-214ENST00000603907 KCNQ3O43525 872 aa27.09■■□□□ 1.93
GRAMD1A-214ENST00000603907 TGFB2P61812 414 aa27.09■■□□□ 1.93
GRAMD1A-214ENST00000603907 RTCBQ9Y3I0 505 aaKnown RBP27.09■■□□□ 1.93
GRAMD1A-214ENST00000603907 LAS1LQ9Y4W2 734 aaKnown RBP27.09■■□□□ 1.93
GRAMD1A-214ENST00000603907 EIF4A1P60842 406 aaKnown RBP27.08■■□□□ 1.93
GRAMD1A-214ENST00000603907 TRAPPC3LQ5T215 181 aa27.08■■□□□ 1.93
GRAMD1A-214ENST00000603907 NLGN1Q8N2Q7 840 aa27.08■■□□□ 1.93
GRAMD1A-214ENST00000603907 KIAA1551Q9HCM1 1747 aa27.07■■□□□ 1.92
GRAMD1A-214ENST00000603907 SNRPA1P09661 255 aaKnown RBP27.06■■□□□ 1.92
GRAMD1A-214ENST00000603907 BCS1LQ9Y276 419 aa27.06■■□□□ 1.92
GRAMD1A-214ENST00000603907 ADRA2BP18089 450 aa27.04■■□□□ 1.92
GRAMD1A-214ENST00000603907 APLP1P51693 650 aa27.04■■□□□ 1.92
GRAMD1A-214ENST00000603907 MBIPQ9NS73 344 aa27.04■■□□□ 1.92
GRAMD1A-214ENST00000603907 CCDC87Q9NVE4 849 aa27.04■■□□□ 1.92
GRAMD1A-214ENST00000603907 C10orf71Q711Q0 1435 aa27.04■■□□□ 1.92
GRAMD1A-214ENST00000603907 HNRNPUQ00839 825 aaKnown RBP eCLIP27.03■■□□□ 1.92
GRAMD1A-214ENST00000603907 TJP1Q07157 1748 aa27.03■■□□□ 1.92
GRAMD1A-214ENST00000603907 RC3H1Q5TC82 1133 aaKnown RBP27.03■■□□□ 1.92
GRAMD1A-214ENST00000603907 CNTNAP4Q9C0A0 1308 aa27.03■■□□□ 1.92
GRAMD1A-214ENST00000603907 COL5A3P25940 1745 aaPredicted RBP27.02■■□□□ 1.92
GRAMD1A-214ENST00000603907 A0A0G2JLW4 131 aa27.02■■□□□ 1.92
GRAMD1A-214ENST00000603907 TOMM70O94826 608 aa27.02■■□□□ 1.92
GRAMD1A-214ENST00000603907 STARD3NLO95772 234 aa27.02■■□□□ 1.92
GRAMD1A-214ENST00000603907 GOLGA2Q08379 1002 aa27.02■■□□□ 1.92
GRAMD1A-214ENST00000603907 DNAJC10Q8IXB1 793 aa27.02■■□□□ 1.92
GRAMD1A-214ENST00000603907 C4AP0C0L4 1744 aa27.02■■□□□ 1.92
GRAMD1A-214ENST00000603907 ARHGAP27Q6ZUM4 889 aa27.01■■□□□ 1.91
GRAMD1A-214ENST00000603907 MYH16Q9H6N6 1097 aa27.01■■□□□ 1.91
GRAMD1A-214ENST00000603907 CYP19A1P11511 503 aaPredicted RBP27■■□□□ 1.91
GRAMD1A-214ENST00000603907 RFC4P35249 363 aa27■■□□□ 1.91
GRAMD1A-214ENST00000603907 ARHGEF1Q92888 912 aaKnown RBP27■■□□□ 1.91
GRAMD1A-214ENST00000603907 PARP3Q9Y6F1 533 aa27■■□□□ 1.91
GRAMD1A-214ENST00000603907 HOXB7P09629 217 aa26.99■■□□□ 1.91
GRAMD1A-214ENST00000603907 BRCA1P38398 1863 aaKnown RBP26.98■■□□□ 1.91
GRAMD1A-214ENST00000603907 SOS1Q07889 1333 aaPredicted RBP26.98■■□□□ 1.91
GRAMD1A-214ENST00000603907 E9PSI1 815 aa26.98■■□□□ 1.91
GRAMD1A-214ENST00000603907 RPS6KA4O75676 772 aa26.97■■□□□ 1.91
GRAMD1A-214ENST00000603907 GYS1P13807 737 aa26.97■■□□□ 1.91
GRAMD1A-214ENST00000603907 CRKLP46109 303 aaKnown RBP26.97■■□□□ 1.91
GRAMD1A-214ENST00000603907 DPEP1P16444 411 aa26.96■■□□□ 1.91
GRAMD1A-214ENST00000603907 ARFGEF1Q9Y6D6 1849 aa26.95■■□□□ 1.91
GRAMD1A-214ENST00000603907 ZBED9Q6R2W3 1325 aa26.95■■□□□ 1.91
GRAMD1A-214ENST00000603907 FANCIQ9NVI1 1328 aa26.95■■□□□ 1.91
GRAMD1A-214ENST00000603907 CHMP4AQ9BY43 222 aa26.95■■□□□ 1.9
GRAMD1A-214ENST00000603907 USP16Q9Y5T5 823 aa26.95■■□□□ 1.9
GRAMD1A-214ENST00000603907 TSR2Q969E8 191 aaKnown RBP26.94■■□□□ 1.9
GRAMD1A-214ENST00000603907 SPINK5Q9NQ38 1064 aaPredicted RBP26.94■■□□□ 1.9
GRAMD1A-214ENST00000603907 SLFN5Q08AF3 891 aa26.93■■□□□ 1.9
GRAMD1A-214ENST00000603907 INTS5Q6P9B9 1019 aaKnown RBP26.93■■□□□ 1.9
GRAMD1A-214ENST00000603907 LAMB4A4D0S4 1761 aa26.93■■□□□ 1.9
GRAMD1A-214ENST00000603907 MYH14Q7Z406 1995 aaKnown RBP26.92■■□□□ 1.9
GRAMD1A-214ENST00000603907 PRAMEF22A3QJZ6 481 aa26.92■■□□□ 1.9
GRAMD1A-214ENST00000603907 NMRK2Q9NPI5 230 aa26.92■■□□□ 1.9
GRAMD1A-214ENST00000603907 ERBB4Q15303 1308 aa26.91■■□□□ 1.9
GRAMD1A-214ENST00000603907 DUSP27Q5VZP5 1158 aa26.91■■□□□ 1.9
GRAMD1A-214ENST00000603907 C16orf71Q8IYS4 520 aaPredicted RBP26.91■■□□□ 1.9
GRAMD1A-214ENST00000603907 PIM2Q9P1W9 311 aa26.9■■□□□ 1.9
GRAMD1A-214ENST00000603907 KRT24Q2M2I5 525 aa26.89■■□□□ 1.9
GRAMD1A-214ENST00000603907 C9orf131Q5VYM1 1079 aa26.89■■□□□ 1.9
GRAMD1A-214ENST00000603907 DNAJC5GQ8N7S2 189 aa26.89■■□□□ 1.9
GRAMD1A-214ENST00000603907 RBM46Q8TBY0 533 aaKnown RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms