RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 COL3A1P02461 1466 aaPredicted RBP14.09□□□□□ -0.15
FARP1-240ENST00000602263 SIPA1L3O60292 1781 aaPredicted RBP14.09□□□□□ -0.15
FARP1-240ENST00000602263 POLRMTO00411 1230 aaKnown RBP14.08□□□□□ -0.16
FARP1-240ENST00000602263 HSPA6P17066 643 aa14.08□□□□□ -0.16
FARP1-240ENST00000602263 GAS2L2Q8NHY3 880 aa14.08□□□□□ -0.16
FARP1-240ENST00000602263 SBF1O95248 1867 aa14.08□□□□□ -0.16
FARP1-240ENST00000602263 DLEC1Q9Y238 1755 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 KIF3CO14782 793 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 STARD3NLO95772 234 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 KCNA3P22001 575 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 TEFQ10587 303 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 NARFQ9UHQ1 456 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 ZBTB1Q9Y2K1 713 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
FARP1-240ENST00000602263 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
FARP1-240ENST00000602263 TM4SF1P30408 202 aa14.06□□□□□ -0.16
FARP1-240ENST00000602263 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
FARP1-240ENST00000602263 A0A087WZG4 1122 aa14.05□□□□□ -0.16
FARP1-240ENST00000602263 CHRNA5P30532 468 aa14.05□□□□□ -0.16
FARP1-240ENST00000602263 NFIXQ14938 502 aa14.05□□□□□ -0.16
FARP1-240ENST00000602263 C9orf131Q5VYM1 1079 aa14.05□□□□□ -0.16
FARP1-240ENST00000602263 CANXP27824 592 aaKnown RBP14.04□□□□□ -0.16
FARP1-240ENST00000602263 SCN7AQ01118 1682 aa14.04□□□□□ -0.16
FARP1-240ENST00000602263 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
FARP1-240ENST00000602263 TOMM70O94826 608 aa14.03□□□□□ -0.16
FARP1-240ENST00000602263 SERPINB2P05120 415 aa14.03□□□□□ -0.16
FARP1-240ENST00000602263 TEX13AQ9BXU3 409 aaPredicted RBP14.03□□□□□ -0.16
FARP1-240ENST00000602263 RNF181Q9P0P0 153 aa14.03□□□□□ -0.16
FARP1-240ENST00000602263 TNRC6CQ9HCJ0 1690 aaKnown RBP14.03□□□□□ -0.16
FARP1-240ENST00000602263 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.17
FARP1-240ENST00000602263 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
FARP1-240ENST00000602263 ZNF790Q6PG37 636 aa14.02□□□□□ -0.17
FARP1-240ENST00000602263 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
FARP1-240ENST00000602263 C16orf71Q8IYS4 520 aaPredicted RBP14.02□□□□□ -0.17
FARP1-240ENST00000602263 NMRK2Q9NPI5 230 aa14.02□□□□□ -0.17
FARP1-240ENST00000602263 NUDCQ9Y266 331 aa14.02□□□□□ -0.17
FARP1-240ENST00000602263 PRKAR2BP31323 418 aa14.01□□□□□ -0.17
FARP1-240ENST00000602263 EIF5P55010 431 aaKnown RBP14.01□□□□□ -0.17
FARP1-240ENST00000602263 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
FARP1-240ENST00000602263 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
FARP1-240ENST00000602263 FMNL2Q96PY5 1086 aa14.01□□□□□ -0.17
FARP1-240ENST00000602263 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
FARP1-240ENST00000602263 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
FARP1-240ENST00000602263 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
FARP1-240ENST00000602263 APLP1P51693 650 aa14□□□□□ -0.17
FARP1-240ENST00000602263 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
FARP1-240ENST00000602263 CEMIPQ8WUJ3 1361 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 TIAM2Q8IVF5 1701 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 H0YIN7 160 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 IL6STP40189 918 aaPredicted RBP13.99□□□□□ -0.17
FARP1-240ENST00000602263 C2CD5Q86YS7 1000 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 CACNA1SQ13698 1873 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 BCORQ6W2J9 1755 aa13.99□□□□□ -0.17
FARP1-240ENST00000602263 ZC3H4Q9UPT8 1303 aaKnown RBP13.98□□□□□ -0.17
FARP1-240ENST00000602263 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
FARP1-240ENST00000602263 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
FARP1-240ENST00000602263 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.17
FARP1-240ENST00000602263 RBM46Q8TBY0 533 aaKnown RBP13.98□□□□□ -0.17
FARP1-240ENST00000602263 RTF1Q92541 710 aaKnown RBP13.98□□□□□ -0.17
FARP1-240ENST00000602263 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
FARP1-240ENST00000602263 CARMIL3Q8ND23 1372 aa13.97□□□□□ -0.17
FARP1-240ENST00000602263 NPHP1O15259 732 aa13.97□□□□□ -0.17
FARP1-240ENST00000602263 RASSF7Q02833 373 aa13.97□□□□□ -0.17
FARP1-240ENST00000602263 PHACTR3Q96KR7 559 aa13.97□□□□□ -0.17
FARP1-240ENST00000602263 PDZRN3Q9UPQ7 1066 aa13.97□□□□□ -0.17
FARP1-240ENST00000602263 TBC1D2BQ9UPU7 963 aa13.97□□□□□ -0.17
FARP1-240ENST00000602263 COL11A2P13942 1736 aaPredicted RBP13.97□□□□□ -0.17
FARP1-240ENST00000602263 DICER1Q9UPY3 1922 aaKnown RBP13.97□□□□□ -0.17
FARP1-240ENST00000602263 LMNB1P20700 586 aa13.96□□□□□ -0.17
FARP1-240ENST00000602263 PDE6BP35913 854 aa13.96□□□□□ -0.17
FARP1-240ENST00000602263 TBC1D9BQ66K14 1250 aa13.96□□□□□ -0.17
FARP1-240ENST00000602263 A1BGP04217 495 aa13.95□□□□□ -0.18
FARP1-240ENST00000602263 PPP2R1AP30153 589 aa13.95□□□□□ -0.18
FARP1-240ENST00000602263 FSTL1Q12841 308 aa13.95□□□□□ -0.18
FARP1-240ENST00000602263 ZNF622Q969S3 477 aaKnown RBP eCLIP13.95□□□□□ -0.18
FARP1-240ENST00000602263 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
FARP1-240ENST00000602263 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
FARP1-240ENST00000602263 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
FARP1-240ENST00000602263 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
FARP1-240ENST00000602263 DLG5Q8TDM6 1919 aa13.94□□□□□ -0.18
FARP1-240ENST00000602263 ST5P78524 1137 aa13.94□□□□□ -0.18
FARP1-240ENST00000602263 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
FARP1-240ENST00000602263 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
FARP1-240ENST00000602263 CNBD1Q8NA66 436 aa13.94□□□□□ -0.18
FARP1-240ENST00000602263 RRAGCQ9HB90 399 aa13.94□□□□□ -0.18
FARP1-240ENST00000602263 KCNQ3O43525 872 aa13.93□□□□□ -0.18
FARP1-240ENST00000602263 CAMTA2O94983 1202 aa13.93□□□□□ -0.18
FARP1-240ENST00000602263 NEFMP07197 916 aa13.93□□□□□ -0.18
FARP1-240ENST00000602263 MCM10Q7L590 875 aa13.93□□□□□ -0.18
FARP1-240ENST00000602263 LAMB4A4D0S4 1761 aa13.93□□□□□ -0.18
FARP1-240ENST00000602263 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
FARP1-240ENST00000602263 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
FARP1-240ENST00000602263 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
FARP1-240ENST00000602263 SMC1BQ8NDV3 1235 aa13.92□□□□□ -0.18
FARP1-240ENST00000602263 ZNF652Q9Y2D9 606 aa13.92□□□□□ -0.18
FARP1-240ENST00000602263 SLX4Q8IY92 1834 aa13.92□□□□□ -0.18
FARP1-240ENST00000602263 GLTPD2A6NH11 291 aa13.91□□□□□ -0.18
FARP1-240ENST00000602263 CCDC24Q8N4L8 307 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms