RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
ZNF548-210ENST00000600442 SGIP1Q9BQI5 828 aa16.24■□□□□ 0.19
ZNF548-210ENST00000600442 RGPD2P0DJD1 1756 aa16.23■□□□□ 0.19
ZNF548-210ENST00000600442 CYP27B1O15528 508 aa16.23■□□□□ 0.19
ZNF548-210ENST00000600442 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
ZNF548-210ENST00000600442 NOB1Q9ULX3 412 aaKnown RBP16.23■□□□□ 0.19
ZNF548-210ENST00000600442 BTAF1O14981 1849 aa16.22■□□□□ 0.19
ZNF548-210ENST00000600442 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
ZNF548-210ENST00000600442 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
ZNF548-210ENST00000600442 PTPRCP08575 1304 aa16.21■□□□□ 0.19
ZNF548-210ENST00000600442 MRPL50Q8N5N7 158 aaKnown RBP16.21■□□□□ 0.19
ZNF548-210ENST00000600442 EXOC6Q8TAG9 804 aa16.21■□□□□ 0.19
ZNF548-210ENST00000600442 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
ZNF548-210ENST00000600442 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
ZNF548-210ENST00000600442 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
ZNF548-210ENST00000600442 ARXQ96QS3 562 aa16.2■□□□□ 0.18
ZNF548-210ENST00000600442 HDGFL1Q5TGJ6 251 aa16.19■□□□□ 0.18
ZNF548-210ENST00000600442 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
ZNF548-210ENST00000600442 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
ZNF548-210ENST00000600442 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
ZNF548-210ENST00000600442 ZNF790Q6PG37 636 aa16.18■□□□□ 0.18
ZNF548-210ENST00000600442 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
ZNF548-210ENST00000600442 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
ZNF548-210ENST00000600442 PKD1L3Q7Z443 1732 aa16.18■□□□□ 0.18
ZNF548-210ENST00000600442 TRIM27P14373 513 aa16.17■□□□□ 0.18
ZNF548-210ENST00000600442 MVPQ14764 893 aaKnown RBP16.17■□□□□ 0.18
ZNF548-210ENST00000600442 C20orf194Q5TEA3 1177 aa16.17■□□□□ 0.18
ZNF548-210ENST00000600442 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
ZNF548-210ENST00000600442 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
ZNF548-210ENST00000600442 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
ZNF548-210ENST00000600442 CLUAP1Q96AJ1 413 aa16.16■□□□□ 0.18
ZNF548-210ENST00000600442 LRRC4BQ9NT99 713 aa16.16■□□□□ 0.18
ZNF548-210ENST00000600442 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
ZNF548-210ENST00000600442 SNRPA1P09661 255 aaKnown RBP16.15■□□□□ 0.18
ZNF548-210ENST00000600442 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
ZNF548-210ENST00000600442 COG6Q9Y2V7 657 aa16.15■□□□□ 0.18
ZNF548-210ENST00000600442 GOLGB1Q14789 3259 aaKnown RBP16.14■□□□□ 0.18
ZNF548-210ENST00000600442 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
ZNF548-210ENST00000600442 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
ZNF548-210ENST00000600442 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
ZNF548-210ENST00000600442 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
ZNF548-210ENST00000600442 C1QTNF8P60827 252 aa16.13■□□□□ 0.17
ZNF548-210ENST00000600442 GPR162Q16538 588 aa16.13■□□□□ 0.17
ZNF548-210ENST00000600442 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
ZNF548-210ENST00000600442 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
ZNF548-210ENST00000600442 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
ZNF548-210ENST00000600442 MRC1P22897 1456 aa16.13■□□□□ 0.17
ZNF548-210ENST00000600442 ADAMTS7Q9UKP4 1686 aa16.12■□□□□ 0.17
ZNF548-210ENST00000600442 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
ZNF548-210ENST00000600442 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
ZNF548-210ENST00000600442 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
ZNF548-210ENST00000600442 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
ZNF548-210ENST00000600442 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
ZNF548-210ENST00000600442 DDX58O95786 925 aaKnown RBP16.11■□□□□ 0.17
ZNF548-210ENST00000600442 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
ZNF548-210ENST00000600442 SLC16A10Q8TF71 515 aa16.11■□□□□ 0.17
ZNF548-210ENST00000600442 FLIIQ13045 1269 aa16.1■□□□□ 0.17
ZNF548-210ENST00000600442 SLC27A3Q5K4L6 730 aa16.1■□□□□ 0.17
ZNF548-210ENST00000600442 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
ZNF548-210ENST00000600442 SCN11AQ9UI33 1791 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 KCNQ3O43525 872 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 POLD1P28340 1107 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 SLC39A6Q13433 755 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
ZNF548-210ENST00000600442 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 RWDD1Q9H446 243 aaPredicted RBP16.09■□□□□ 0.17
ZNF548-210ENST00000600442 HDAC5Q9UQL6 1122 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 ABCC4O15439 1325 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
ZNF548-210ENST00000600442 RLBP1P12271 317 aa16.08■□□□□ 0.16
ZNF548-210ENST00000600442 KCNQ4P56696 695 aa16.08■□□□□ 0.16
ZNF548-210ENST00000600442 INTS3Q68E01 1043 aaKnown RBP16.08■□□□□ 0.16
ZNF548-210ENST00000600442 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
ZNF548-210ENST00000600442 SYTL4Q96C24 671 aaPredicted RBP16.08■□□□□ 0.16
ZNF548-210ENST00000600442 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
ZNF548-210ENST00000600442 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
ZNF548-210ENST00000600442 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
ZNF548-210ENST00000600442 STARD3NLO95772 234 aa16.07■□□□□ 0.16
ZNF548-210ENST00000600442 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
ZNF548-210ENST00000600442 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
ZNF548-210ENST00000600442 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
ZNF548-210ENST00000600442 LY75O60449 1722 aa16.07■□□□□ 0.16
ZNF548-210ENST00000600442 KDM3BQ7LBC6 1761 aa16.06■□□□□ 0.16
ZNF548-210ENST00000600442 DOT1LQ8TEK3 1739 aa16.06■□□□□ 0.16
ZNF548-210ENST00000600442 SMARCC1Q92922 1105 aaPredicted RBP16.06■□□□□ 0.16
ZNF548-210ENST00000600442 SLC4A10Q6U841 1118 aa16.05■□□□□ 0.16
ZNF548-210ENST00000600442 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
ZNF548-210ENST00000600442 PIGBQ92521 554 aa16.05■□□□□ 0.16
ZNF548-210ENST00000600442 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
ZNF548-210ENST00000600442 NLGN2Q8NFZ4 835 aa16.04■□□□□ 0.16
ZNF548-210ENST00000600442 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
ZNF548-210ENST00000600442 GNAI3P08754 354 aa16.03■□□□□ 0.16
ZNF548-210ENST00000600442 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
ZNF548-210ENST00000600442 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
ZNF548-210ENST00000600442 HMGB2P26583 209 aaKnown RBP16.02■□□□□ 0.16
ZNF548-210ENST00000600442 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
ZNF548-210ENST00000600442 ZBTB7BO15156 539 aaPredicted RBP16.01■□□□□ 0.15
ZNF548-210ENST00000600442 KSR2Q6VAB6 950 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms