RNA–Protein interactions for RNA: ENST00000597493.5

C19orf48-208, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 971 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-208ENST00000597493 TM4SF1P30408 202 aa16.34■□□□□ 0.21
C19orf48-208ENST00000597493 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
C19orf48-208ENST00000597493 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
C19orf48-208ENST00000597493 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
C19orf48-208ENST00000597493 USP16Q9Y5T5 823 aa16.34■□□□□ 0.21
C19orf48-208ENST00000597493 A0A087WZG4 1122 aa16.33■□□□□ 0.2
C19orf48-208ENST00000597493 MMP10P09238 476 aa16.33■□□□□ 0.2
C19orf48-208ENST00000597493 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
C19orf48-208ENST00000597493 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.2
C19orf48-208ENST00000597493 ZPR1O75312 459 aa16.32■□□□□ 0.2
C19orf48-208ENST00000597493 EIF4A1P60842 406 aaKnown RBP16.31■□□□□ 0.2
C19orf48-208ENST00000597493 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
C19orf48-208ENST00000597493 RGL2O15211 777 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 ANP32CO43423 234 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 GIGYF1O75420 1035 aaPredicted RBP16.3■□□□□ 0.2
C19orf48-208ENST00000597493 A1BGP04217 495 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 CANXP27824 592 aaKnown RBP16.3■□□□□ 0.2
C19orf48-208ENST00000597493 FKBP8Q14318 412 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
C19orf48-208ENST00000597493 MIS18AQ9NYP9 233 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 SRP68Q9UHB9 627 aaKnown RBP16.3■□□□□ 0.2
C19orf48-208ENST00000597493 TRIM35Q9UPQ4 493 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 TJP1Q07157 1748 aa16.3■□□□□ 0.2
C19orf48-208ENST00000597493 TGFB2P61812 414 aa16.29■□□□□ 0.2
C19orf48-208ENST00000597493 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
C19orf48-208ENST00000597493 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
C19orf48-208ENST00000597493 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
C19orf48-208ENST00000597493 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
C19orf48-208ENST00000597493 COL15A1P39059 1388 aa16.28■□□□□ 0.2
C19orf48-208ENST00000597493 CHL1O00533 1208 aa16.28■□□□□ 0.2
C19orf48-208ENST00000597493 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
C19orf48-208ENST00000597493 PARP3Q9Y6F1 533 aa16.28■□□□□ 0.2
C19orf48-208ENST00000597493 PRAMEF22A3QJZ6 481 aa16.27■□□□□ 0.2
C19orf48-208ENST00000597493 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
C19orf48-208ENST00000597493 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.19
C19orf48-208ENST00000597493 NBPF26B4DH59 902 aa16.26■□□□□ 0.19
C19orf48-208ENST00000597493 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
C19orf48-208ENST00000597493 NBPF10Q6P3W6 841 aaKnown RBP16.26■□□□□ 0.19
C19orf48-208ENST00000597493 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
C19orf48-208ENST00000597493 NBPF15Q8N660 670 aa16.26■□□□□ 0.19
C19orf48-208ENST00000597493 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
C19orf48-208ENST00000597493 DDR1Q08345 913 aa16.25■□□□□ 0.19
C19orf48-208ENST00000597493 NFIXQ14938 502 aa16.25■□□□□ 0.19
C19orf48-208ENST00000597493 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
C19orf48-208ENST00000597493 APAF1O14727 1248 aa16.24■□□□□ 0.19
C19orf48-208ENST00000597493 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
C19orf48-208ENST00000597493 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
C19orf48-208ENST00000597493 GPR162Q16538 588 aa16.24■□□□□ 0.19
C19orf48-208ENST00000597493 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
C19orf48-208ENST00000597493 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
C19orf48-208ENST00000597493 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
C19orf48-208ENST00000597493 ERBB4Q15303 1308 aa16.23■□□□□ 0.19
C19orf48-208ENST00000597493 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
C19orf48-208ENST00000597493 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
C19orf48-208ENST00000597493 TBC1D2BQ9UPU7 963 aa16.23■□□□□ 0.19
C19orf48-208ENST00000597493 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
C19orf48-208ENST00000597493 C10orf71Q711Q0 1435 aa16.21■□□□□ 0.19
C19orf48-208ENST00000597493 SERPINB2P05120 415 aa16.21■□□□□ 0.19
C19orf48-208ENST00000597493 KCNA3P22001 575 aa16.21■□□□□ 0.19
C19orf48-208ENST00000597493 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
C19orf48-208ENST00000597493 DZIP3Q86Y13 1208 aaKnown RBP16.21■□□□□ 0.19
C19orf48-208ENST00000597493 ERVV-1B6SEH8 477 aa16.2■□□□□ 0.18
C19orf48-208ENST00000597493 HOXB7P09629 217 aa16.2■□□□□ 0.18
C19orf48-208ENST00000597493 YBX3P16989 372 aaKnown RBP eCLIP16.2■□□□□ 0.18not detected■□□□□ 10.6
C19orf48-208ENST00000597493 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
C19orf48-208ENST00000597493 PDIA6Q15084 440 aa16.19■□□□□ 0.18
C19orf48-208ENST00000597493 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
C19orf48-208ENST00000597493 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
C19orf48-208ENST00000597493 UTRNP46939 3433 aa16.19■□□□□ 0.18
C19orf48-208ENST00000597493 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
C19orf48-208ENST00000597493 SETDB2Q96T68 719 aa16.18■□□□□ 0.18
C19orf48-208ENST00000597493 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
C19orf48-208ENST00000597493 C4AP0C0L4 1744 aa16.17■□□□□ 0.18
C19orf48-208ENST00000597493 DPEP1P16444 411 aa16.17■□□□□ 0.18
C19orf48-208ENST00000597493 YY1P25490 414 aa16.17■□□□□ 0.18
C19orf48-208ENST00000597493 PIP4K2AP48426 406 aaPredicted RBP16.17■□□□□ 0.18
C19orf48-208ENST00000597493 GNAI1P63096 354 aa16.17■□□□□ 0.18
C19orf48-208ENST00000597493 NGEFQ8N5V2 710 aa16.17■□□□□ 0.18
C19orf48-208ENST00000597493 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
C19orf48-208ENST00000597493 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
C19orf48-208ENST00000597493 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
C19orf48-208ENST00000597493 SENP3-EIF4A1A0A087X0R7 540 aa16.16■□□□□ 0.18
C19orf48-208ENST00000597493 BRIP1Q9BX63 1249 aa16.16■□□□□ 0.18
C19orf48-208ENST00000597493 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
C19orf48-208ENST00000597493 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
C19orf48-208ENST00000597493 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
C19orf48-208ENST00000597493 MBIPQ9NS73 344 aa16.15■□□□□ 0.18
C19orf48-208ENST00000597493 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
C19orf48-208ENST00000597493 CARMIL3Q8ND23 1372 aa16.14■□□□□ 0.17
C19orf48-208ENST00000597493 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
C19orf48-208ENST00000597493 KIF13BQ9NQT8 1826 aa16.14■□□□□ 0.17
C19orf48-208ENST00000597493 MAP3K15Q6ZN16 1313 aa16.14■□□□□ 0.17
C19orf48-208ENST00000597493 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
C19orf48-208ENST00000597493 HLFQ16534 295 aa16.13■□□□□ 0.17
C19orf48-208ENST00000597493 PRR5LQ6MZQ0 368 aa16.13■□□□□ 0.17
C19orf48-208ENST00000597493 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
C19orf48-208ENST00000597493 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
C19orf48-208ENST00000597493 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
C19orf48-208ENST00000597493 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms